Gene annotation
Transcriptome id Sobic.004G345500.1
Synonym KV-BETA1, KAB1, Sb04g037250
Functional annotation oxidoreductase, aldo/keto reductase family protein, putative, expressed
UniProt C5XVW9
Pfam PF00248
Panther DB PTHR11732
NCBI CDD KOG1575; Voltage-gated shaker-like K+ channel, subunit beta/KCNAB
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G04690 : potassium channel beta subunit 1
RAP-DB (Rice) LOC_Os02g57240.1 : oxidoreductase, aldo/keto reductase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a022610 , Zm00025a032801
Brachypodium KQK01363 , PNT69438
Barley HORVU6Hr1G091250.1
Wheat TraesCS6D02G378400 , TraesCS6B02G432900 , TraesCS6A02G392700
Populus -


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cDNA sequences
Sobic.004G345500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
2 Sobic.001G502900 nicotiana lesion-inducing like, putative, expressed -
3 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
4 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
5 Sobic.001G031700 nucleobase-ascorbate transporter, putative, expressed -
6 Sobic.003G125650 - K02183: calmodulin
7 Sobic.001G295200 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
8 Sobic.010G221300 expressed protein -
9 Sobic.007G197800 60S ribosomal protein L32, putative, expressed K02912: RP-L32e, large subunit ribosomal protein L32e
10 Sobic.009G223300 WD repeat-containing protein, putative, expressed K14753: guanine nucleotide-binding protein subunit beta-2-like 1 protein
11 Sobic.003G078200 ribosomal protein L24, putative, expressed K02898: RP-L26e, large subunit ribosomal protein L26e
12 Sobic.001G537200 transcription factor BTF3, putative, expressed K01527: EGD1, nascent polypeptide-associated complex subunit beta
13 Sobic.001G018900 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
14 Sobic.002G379500 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
15 Sobic.007G018300 60S acidic ribosomal protein, putative, expressed K02942: RP-LP1, large subunit ribosomal protein LP1
16 Sobic.002G372400 60S ribosomal protein, putative, expressed K02900: RP-L27Ae, large subunit ribosomal protein L27Ae
17 Sobic.001G533500 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17777: mitochondrial import inner membrane translocase subunit TIM9
18 Sobic.001G361600 chaperonin, putative, expressed K04078: groES, chaperonin GroES
19 Sobic.005G229300 ribosomal protein S2, putative, expressed K02998: RP-SAe, small subunit ribosomal protein SAe
20 Sobic.009G054800 40S ribosomal protein S27a, putative, expressed K02977: RP-S27Ae, RPS27A, ubiquitin-small subunit ribosomal protein S27Ae


Gene co-expression network
sample Sobic004G345500 Sobic004G345500 Sobic003G160700 Sobic003G160700 Sobic004G345500--Sobic003G160700 Sobic001G502900 Sobic001G502900 Sobic004G345500--Sobic001G502900 Sobic005G113300 Sobic005G113300 Sobic004G345500--Sobic005G113300 Sobic001G475500 Sobic001G475500 Sobic004G345500--Sobic001G475500 Sobic001G031700 Sobic001G031700 Sobic004G345500--Sobic001G031700 Sobic003G125650 Sobic003G125650 Sobic004G345500--Sobic003G125650 Sobic001G295200 Sobic001G295200 Sobic004G345500--Sobic001G295200 Sobic010G221300 Sobic010G221300 Sobic004G345500--Sobic010G221300 Sobic007G197800 Sobic007G197800 Sobic004G345500--Sobic007G197800 Sobic003G160700--Sobic005G113300 Sobic004G041900 Sobic004G041900 Sobic003G160700--Sobic004G041900 Sobic003G160700--Sobic003G125650 Sobic003G078200 Sobic003G078200 Sobic003G160700--Sobic003G078200 Sobic003G160700--Sobic001G475500 Sobic003G160700--Sobic001G502900 Sobic004G220000 Sobic004G220000 Sobic003G160700--Sobic004G220000 Sobic009G188000 Sobic009G188000 Sobic003G160700--Sobic009G188000 Sobic003G436700 Sobic003G436700 Sobic003G160700--Sobic003G436700 Sobic001G502900--Sobic001G475500 Sobic001G502900--Sobic003G160700 Sobic001G502900--Sobic005G113300 Sobic001G502900--Sobic003G078200 Sobic001G018900 Sobic001G018900 Sobic001G502900--Sobic001G018900 Sobic001G502900--Sobic004G220000 Sobic001G502900--Sobic003G125650 Sobic005G019700 Sobic005G019700 Sobic001G502900--Sobic005G019700 Sobic001G502900--Sobic004G345500 Sobic005G113300--Sobic004G220000 Sobic005G113300--Sobic001G295200 Sobic001G361600 Sobic001G361600 Sobic005G113300--Sobic001G361600 Sobic006G116700 Sobic006G116700 Sobic005G113300--Sobic006G116700 Sobic005G113300--Sobic001G018900 Sobic005G113300--Sobic007G197800 Sobic009G076400 Sobic009G076400 Sobic005G113300--Sobic009G076400 Sobic002G379500 Sobic002G379500 Sobic005G113300--Sobic002G379500 Sobic005G113300--Sobic003G160700 Sobic001G475500--Sobic001G502900 Sobic001G475500--Sobic003G160700 Sobic003G122200 Sobic003G122200 Sobic001G475500--Sobic003G122200 Sobic001G475500--Sobic005G113300 Sobic007G150800 Sobic007G150800 Sobic001G475500--Sobic007G150800 Sobic009G173500 Sobic009G173500 Sobic001G475500--Sobic009G173500 Sobic001G475500--Sobic001G361600 Sobic001G475500--Sobic004G220000 Sobic003G117500 Sobic003G117500 Sobic001G475500--Sobic003G117500 Sobic001G031700--Sobic004G041900 Sobic007G017500 Sobic007G017500 Sobic001G031700--Sobic007G017500 Sobic006G075400 Sobic006G075400 Sobic001G031700--Sobic006G075400 Sobic001G031700--Sobic001G295200 Sobic007G058400 Sobic007G058400 Sobic001G031700--Sobic007G058400 Sobic003G432700 Sobic003G432700 Sobic001G031700--Sobic003G432700 Sobic001G031700--Sobic010G221300 Sobic004G294400 Sobic004G294400 Sobic001G031700--Sobic004G294400 Sobic001G313600 Sobic001G313600 Sobic001G031700--Sobic001G313600 Sobic003G125650--Sobic007G197800 Sobic001G130301 Sobic001G130301 Sobic003G125650--Sobic001G130301 Sobic003G125650--Sobic001G018900 Sobic001G402050 Sobic001G402050 Sobic003G125650--Sobic001G402050 Sobic001G390300 Sobic001G390300 Sobic003G125650--Sobic001G390300 Sobic003G125650--Sobic006G116700 Sobic001G493001 Sobic001G493001 Sobic003G125650--Sobic001G493001 Sobic002G200600 Sobic002G200600 Sobic003G125650--Sobic002G200600 Sobic009G050300 Sobic009G050300 Sobic003G125650--Sobic009G050300 Sobic006G141700 Sobic006G141700 Sobic001G295200--Sobic006G141700 Sobic001G295200--Sobic001G018900 Sobic001G295200--Sobic006G116700 Sobic001G295200--Sobic001G361600 Sobic001G295200--Sobic005G113300 Sobic001G295200--Sobic003G078200 Sobic001G036900 Sobic001G036900 Sobic001G295200--Sobic001G036900 Sobic001G295200--Sobic007G197800 Sobic009G215200 Sobic009G215200 Sobic001G295200--Sobic009G215200 Sobic006G191800 Sobic006G191800 Sobic010G221300--Sobic006G191800 Sobic010G221300--Sobic004G041900 Sobic010G221300--Sobic001G031700 Sobic010G047100 Sobic010G047100 Sobic010G221300--Sobic010G047100 Sobic010G221300--Sobic003G160700 Sobic010G221300--Sobic003G125650 Sobic004G203700 Sobic004G203700 Sobic010G221300--Sobic004G203700 Sobic009G184000 Sobic009G184000 Sobic010G221300--Sobic009G184000 Sobic002G387900 Sobic002G387900 Sobic010G221300--Sobic002G387900 Sobic007G197800--Sobic006G116700 Sobic007G197800--Sobic009G050300 Sobic007G197800--Sobic001G130301 Sobic007G197800--Sobic001G018900 Sobic007G197800--Sobic009G215200 Sobic007G197800--Sobic001G402050 Sobic001G016400 Sobic001G016400 Sobic007G197800--Sobic001G016400 Sobic001G403500 Sobic001G403500 Sobic007G197800--Sobic001G403500 Sobic004G008400 Sobic004G008400 Sobic007G197800--Sobic004G008400
Octagon: transcription factors


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