Gene annotation
Transcriptome id Sobic.009G173500.1
Synonym Sb09g023400
Functional annotation 40S ribosomal protein S26, putative, expressed
UniProt C5YZS0
Pfam PF01283
Panther DB PTHR12538 PTHR12538:SF1
NCBI CDD KOG1768; 40s ribosomal protein S26
KEGG Orthology K02976; RP-S26e, small subunit ribosomal protein S26e
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT2G40510 : Ribosomal protein S26e family protein
RAP-DB (Rice) LOC_Os05g39960.3 : 40S ribosomal protein S26, putative, expressed
MaizeGDB (Corn) Zm00025a037789
Brachypodium KQK10366
Barley HORVU5Hr1G111820.2 , HORVU5Hr1G111820.4 , HORVU5Hr1G111820.5 , HORVU5Hr1G111820.6 , HORVU5Hr1G111820.1 , HORVU5Hr1G111820.3
Wheat TraesCS3D02G338800 , TraesCS3A02G344900 , TraesCS5B02G481800 , TraesCS3D02G338900 , TraesCS5A02G469300 , TraesCS3D02G338700 , TraesCS3B02G377000
Populus -


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cDNA sequences
Sobic.009G173500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G039400 40S ribosomal protein S26, putative, expressed K02976: RP-S26e, small subunit ribosomal protein S26e
2 Sobic.001G226500 60S ribosomal protein L21-2, putative, expressed K02889: RP-L21e, large subunit ribosomal protein L21e
3 Sobic.009G233400 60S ribosomal protein L18a, putative, expressed K02882: RP-L18Ae, large subunit ribosomal protein L18Ae
4 Sobic.009G223300 WD repeat-containing protein, putative, expressed K14753: guanine nucleotide-binding protein subunit beta-2-like 1 protein
5 Sobic.003G109600 40S ribosomal protein S5, putative, expressed K02989: RP-S5e, small subunit ribosomal protein S5e
6 Sobic.003G078200 ribosomal protein L24, putative, expressed K02898: RP-L26e, large subunit ribosomal protein L26e
7 Sobic.003G249700 60S ribosomal protein L18a, putative, expressed K02882: RP-L18Ae, large subunit ribosomal protein L18Ae
8 Sobic.009G179100 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
9 Sobic.010G070500 60S ribosomal protein L35a-3, putative, expressed K02917: RP-L35Ae, large subunit ribosomal protein L35Ae
10 Sobic.010G076400 40S ribosomal protein S17, putative, expressed K02962: RP-S17e, small subunit ribosomal protein S17e
11 Sobic.002G379500 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
12 Sobic.004G008400 ribosomal protein L37, putative, expressed K02922: RP-L37e, large subunit ribosomal protein L37e
13 Sobic.010G069400 60S ribosomal protein L19-3, putative, expressed K02885: RP-L19e, large subunit ribosomal protein L19e
14 Sobic.007G019400 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e
15 Sobic.001G175300 ribosomal protein L24, putative, expressed K02896: RP-L24e, large subunit ribosomal protein L24e
16 Sobic.002G047600 60S ribosomal protein L15, putative, expressed K02877: RP-L15e, large subunit ribosomal protein L15e
17 Sobic.003G436700 40S ribosomal protein S10, putative, expressed K02947: RP-S10e, small subunit ribosomal protein S10e
18 Sobic.007G053300 40S ribosomal protein S3-1, putative, expressed K02985: RP-S3e, small subunit ribosomal protein S3e
19 Sobic.002G286900 ribosomal protein L14, putative, expressed K02875: RP-L14e, large subunit ribosomal protein L14e
20 Sobic.002G372400 60S ribosomal protein, putative, expressed K02900: RP-L27Ae, large subunit ribosomal protein L27Ae


Gene co-expression network
sample Sobic009G173500 Sobic009G173500 Sobic001G039400 Sobic001G039400 Sobic009G173500--Sobic001G039400 Sobic001G226500 Sobic001G226500 Sobic009G173500--Sobic001G226500 Sobic009G233400 Sobic009G233400 Sobic009G173500--Sobic009G233400 Sobic009G223300 Sobic009G223300 Sobic009G173500--Sobic009G223300 Sobic003G109600 Sobic003G109600 Sobic009G173500--Sobic003G109600 Sobic003G078200 Sobic003G078200 Sobic009G173500--Sobic003G078200 Sobic003G249700 Sobic003G249700 Sobic009G173500--Sobic003G249700 Sobic009G179100 Sobic009G179100 Sobic009G173500--Sobic009G179100 Sobic010G070500 Sobic010G070500 Sobic009G173500--Sobic010G070500 Sobic001G039400--Sobic003G249700 Sobic001G039400--Sobic003G109600 Sobic010G069400 Sobic010G069400 Sobic001G039400--Sobic010G069400 Sobic002G304900 Sobic002G304900 Sobic001G039400--Sobic002G304900 Sobic001G039400--Sobic009G233400 Sobic001G039400--Sobic009G173500 Sobic007G019400 Sobic007G019400 Sobic001G039400--Sobic007G019400 Sobic002G047600 Sobic002G047600 Sobic001G039400--Sobic002G047600 Sobic005G050500 Sobic005G050500 Sobic001G039400--Sobic005G050500 Sobic001G226500--Sobic003G249700 Sobic001G226500--Sobic007G019400 Sobic009G076400 Sobic009G076400 Sobic001G226500--Sobic009G076400 Sobic004G008400 Sobic004G008400 Sobic001G226500--Sobic004G008400 Sobic002G286900 Sobic002G286900 Sobic001G226500--Sobic002G286900 Sobic007G053300 Sobic007G053300 Sobic001G226500--Sobic007G053300 Sobic006G213000 Sobic006G213000 Sobic001G226500--Sobic006G213000 Sobic001G130301 Sobic001G130301 Sobic001G226500--Sobic001G130301 Sobic009G054800 Sobic009G054800 Sobic001G226500--Sobic009G054800 Sobic001G334300 Sobic001G334300 Sobic009G233400--Sobic001G334300 Sobic009G233400--Sobic002G304900 Sobic009G233400--Sobic010G069400 Sobic009G233400--Sobic001G039400 Sobic009G233400--Sobic005G050500 Sobic001G058900 Sobic001G058900 Sobic009G233400--Sobic001G058900 Sobic009G233400--Sobic003G249700 Sobic009G233400--Sobic003G109600 Sobic001G085400 Sobic001G085400 Sobic009G233400--Sobic001G085400 Sobic009G223300--Sobic003G109600 Sobic002G372400 Sobic002G372400 Sobic009G223300--Sobic002G372400 Sobic002G379500 Sobic002G379500 Sobic009G223300--Sobic002G379500 Sobic007G018300 Sobic007G018300 Sobic009G223300--Sobic007G018300 Sobic010G230700 Sobic010G230700 Sobic009G223300--Sobic010G230700 Sobic010G076400 Sobic010G076400 Sobic009G223300--Sobic010G076400 Sobic004G198400 Sobic004G198400 Sobic009G223300--Sobic004G198400 Sobic009G223300--Sobic009G233400 Sobic009G223300--Sobic001G039400 Sobic003G109600--Sobic002G379500 Sobic003G109600--Sobic009G223300 Sobic001G403500 Sobic001G403500 Sobic003G109600--Sobic001G403500 Sobic003G109600--Sobic001G039400 Sobic003G109600--Sobic003G249700 Sobic002G056200 Sobic002G056200 Sobic003G109600--Sobic002G056200 Sobic003G109600--Sobic002G047600 Sobic003G109600--Sobic007G019400 Sobic003G436700 Sobic003G436700 Sobic003G109600--Sobic003G436700 Sobic003G078200--Sobic002G372400 Sobic003G078200--Sobic009G054800 Sobic010G206200 Sobic010G206200 Sobic003G078200--Sobic010G206200 Sobic005G019700 Sobic005G019700 Sobic003G078200--Sobic005G019700 Sobic007G197800 Sobic007G197800 Sobic003G078200--Sobic007G197800 Sobic003G078200--Sobic007G018300 Sobic009G050300 Sobic009G050300 Sobic003G078200--Sobic009G050300 Sobic001G018900 Sobic001G018900 Sobic003G078200--Sobic001G018900 Sobic006G116700 Sobic006G116700 Sobic003G078200--Sobic006G116700 Sobic003G249700--Sobic007G019400 Sobic003G249700--Sobic001G226500 Sobic003G249700--Sobic001G039400 Sobic003G387900 Sobic003G387900 Sobic003G249700--Sobic003G387900 Sobic003G249700--Sobic002G047600 Sobic007G178600 Sobic007G178600 Sobic003G249700--Sobic007G178600 Sobic003G249700--Sobic004G008400 Sobic003G249700--Sobic001G085400 Sobic003G249700--Sobic003G109600 Sobic009G179100--Sobic002G304900 Sobic009G101700 Sobic009G101700 Sobic009G179100--Sobic009G101700 Sobic004G342400 Sobic004G342400 Sobic009G179100--Sobic004G342400 Sobic009G179100--Sobic001G334300 Sobic009G179100--Sobic005G050500 Sobic009G179100--Sobic009G233400 Sobic009G179100--Sobic003G387900 Sobic009G179100--Sobic001G039400 Sobic009G179100--Sobic009G173500 Sobic010G070500--Sobic001G226500 Sobic010G070500--Sobic004G008400 Sobic008G108601 Sobic008G108601 Sobic010G070500--Sobic008G108601 Sobic010G251600 Sobic010G251600 Sobic010G070500--Sobic010G251600 Sobic004G055100 Sobic004G055100 Sobic010G070500--Sobic004G055100 Sobic002G179300 Sobic002G179300 Sobic010G070500--Sobic002G179300 Sobic010G070500--Sobic002G286900 Sobic010G070500--Sobic003G078200 Sobic010G070500--Sobic003G249700
Octagon: transcription factors


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