Gene annotation
Transcriptome id Sobic.003G436700.1
Synonym Sb03g046750
Functional annotation 40S ribosomal protein S10, putative, expressed
UniProt C5XIN8
Pfam PF03501
Panther DB PTHR12146 PTHR12146:SF7
NCBI CDD KOG3344; 40s ribosomal protein s10
KEGG Orthology K02947; RP-S10e, small subunit ribosomal protein S10e
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G25740 : RNA binding Plectin/S10 domain-containing protein
RAP-DB (Rice) LOC_Os01g73160.1 : 40S ribosomal protein S10, putative, expressed
MaizeGDB (Corn) Zm00025a011390 , Zm00025a056064 , Zm00025a039071 , Zm00025a025894
Brachypodium KQJ82637 , KQK11673 , KQJ99398
Barley HORVU3Hr1G111760.5 , HORVU3Hr1G111760.4 , HORVU3Hr1G111760.7 , HORVU3Hr1G111760.6 , HORVU3Hr1G111760.3 , HORVU3Hr1G111760.2 , HORVU0Hr1G004700.1 , HORVU0Hr1G004700.3 , HORVU0Hr1G004700.2 , HORVU0Hr1G004700.5 , HORVU0Hr1G004700.4 , HORVU0Hr1G004700.7
Wheat -
Populus -


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cDNA sequences
Sobic.003G436700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G008400 ribosomal protein L37, putative, expressed K02922: RP-L37e, large subunit ribosomal protein L37e
2 Sobic.006G116700 60S ribosomal protein L6, putative, expressed K02934: RP-L6e, large subunit ribosomal protein L6e
3 Sobic.009G050300 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
4 Sobic.010G251600 60S acidic ribosomal protein, putative, expressed K02942: RP-LP1, large subunit ribosomal protein LP1
5 Sobic.006G067800 60S acidic ribosomal protein, putative, expressed K02943: RP-LP2, large subunit ribosomal protein LP2
6 Sobic.007G178600 - K02966: RP-S19e, small subunit ribosomal protein S19e
7 Sobic.002G081600 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
8 Sobic.009G215200 60S ribosomal protein L28-1, putative, expressed K02903: RP-L28e, large subunit ribosomal protein L28e
9 Sobic.002G379500 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
10 Sobic.003G346600 40S ribosomal protein S23, putative, expressed K02973: RP-S23e, small subunit ribosomal protein S23e
11 Sobic.003G109600 40S ribosomal protein S5, putative, expressed K02989: RP-S5e, small subunit ribosomal protein S5e
12 Sobic.001G403500 40S ribosomal protein S7, putative, expressed K02993: RP-S7e, small subunit ribosomal protein S7e
13 Sobic.001G016500 ribosomal protein L22, putative, expressed K02880: RP-L17e, large subunit ribosomal protein L17e
14 Sobic.010G206200 ribosomal protein, putative, expressed K02955: RP-S14e, small subunit ribosomal protein S14e
15 Sobic.004G198400 60S ribosomal protein L6, putative, expressed K02934: RP-L6e, large subunit ribosomal protein L6e
16 Sobic.006G213000 ribosomal protein S17, putative, expressed K02949: RP-S11e, small subunit ribosomal protein S11e
17 Sobic.001G018900 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
18 Sobic.007G197800 60S ribosomal protein L32, putative, expressed K02912: RP-L32e, large subunit ribosomal protein L32e
19 Sobic.010G063801 - K02924: RP-L39e, large subunit ribosomal protein L39e
20 Sobic.003G078200 ribosomal protein L24, putative, expressed K02898: RP-L26e, large subunit ribosomal protein L26e


Gene co-expression network
sample Sobic003G436700 Sobic003G436700 Sobic004G008400 Sobic004G008400 Sobic003G436700--Sobic004G008400 Sobic006G116700 Sobic006G116700 Sobic003G436700--Sobic006G116700 Sobic009G050300 Sobic009G050300 Sobic003G436700--Sobic009G050300 Sobic010G251600 Sobic010G251600 Sobic003G436700--Sobic010G251600 Sobic006G067800 Sobic006G067800 Sobic003G436700--Sobic006G067800 Sobic007G178600 Sobic007G178600 Sobic003G436700--Sobic007G178600 Sobic002G081600 Sobic002G081600 Sobic003G436700--Sobic002G081600 Sobic009G215200 Sobic009G215200 Sobic003G436700--Sobic009G215200 Sobic002G379500 Sobic002G379500 Sobic003G436700--Sobic002G379500 Sobic004G008400--Sobic009G050300 Sobic004G008400--Sobic007G178600 Sobic003G346600 Sobic003G346600 Sobic004G008400--Sobic003G346600 Sobic004G008400--Sobic006G116700 Sobic002G255300 Sobic002G255300 Sobic004G008400--Sobic002G255300 Sobic007G197800 Sobic007G197800 Sobic004G008400--Sobic007G197800 Sobic004G008400--Sobic003G436700 Sobic006G137100 Sobic006G137100 Sobic004G008400--Sobic006G137100 Sobic004G008400--Sobic002G379500 Sobic006G116700--Sobic009G050300 Sobic006G116700--Sobic007G197800 Sobic006G116700--Sobic009G215200 Sobic001G018900 Sobic001G018900 Sobic006G116700--Sobic001G018900 Sobic006G116700--Sobic002G081600 Sobic006G116700--Sobic004G008400 Sobic001G130301 Sobic001G130301 Sobic006G116700--Sobic001G130301 Sobic002G200600 Sobic002G200600 Sobic006G116700--Sobic002G200600 Sobic001G036900 Sobic001G036900 Sobic006G116700--Sobic001G036900 Sobic009G050300--Sobic006G116700 Sobic009G050300--Sobic004G008400 Sobic009G050300--Sobic007G197800 Sobic009G050300--Sobic002G081600 Sobic009G050300--Sobic003G346600 Sobic009G050300--Sobic009G215200 Sobic001G403500 Sobic001G403500 Sobic009G050300--Sobic001G403500 Sobic009G050300--Sobic001G018900 Sobic009G050300--Sobic002G379500 Sobic010G206200 Sobic010G206200 Sobic010G251600--Sobic010G206200 Sobic007G019400 Sobic007G019400 Sobic010G251600--Sobic007G019400 Sobic010G251600--Sobic003G436700 Sobic010G251600--Sobic007G178600 Sobic010G251600--Sobic009G215200 Sobic010G251600--Sobic006G116700 Sobic003G078200 Sobic003G078200 Sobic010G251600--Sobic003G078200 Sobic001G054900 Sobic001G054900 Sobic010G251600--Sobic001G054900 Sobic004G331400 Sobic004G331400 Sobic010G251600--Sobic004G331400 Sobic006G067800--Sobic002G200600 Sobic006G067800--Sobic002G081600 Sobic001G402050 Sobic001G402050 Sobic006G067800--Sobic001G402050 Sobic006G067800--Sobic006G116700 Sobic006G067800--Sobic009G050300 Sobic006G067800--Sobic009G215200 Sobic006G067800--Sobic007G197800 Sobic006G067800--Sobic003G436700 Sobic006G067800--Sobic001G130301 Sobic007G178600--Sobic004G008400 Sobic007G019000 Sobic007G019000 Sobic007G178600--Sobic007G019000 Sobic007G178600--Sobic003G346600 Sobic007G178600--Sobic009G050300 Sobic008G108601 Sobic008G108601 Sobic007G178600--Sobic008G108601 Sobic006G221200 Sobic006G221200 Sobic007G178600--Sobic006G221200 Sobic009G163800 Sobic009G163800 Sobic007G178600--Sobic009G163800 Sobic003G249700 Sobic003G249700 Sobic007G178600--Sobic003G249700 Sobic002G047600 Sobic002G047600 Sobic007G178600--Sobic002G047600 Sobic002G081600--Sobic009G050300 Sobic002G081600--Sobic006G116700 Sobic002G081600--Sobic003G346600 Sobic002G081600--Sobic009G215200 Sobic001G374700 Sobic001G374700 Sobic002G081600--Sobic001G374700 Sobic002G081600--Sobic002G200600 Sobic002G081600--Sobic006G067800 Sobic009G166500 Sobic009G166500 Sobic002G081600--Sobic009G166500 Sobic002G081600--Sobic001G403500 Sobic009G215200--Sobic006G116700 Sobic009G215200--Sobic009G050300 Sobic009G215200--Sobic001G130301 Sobic009G215200--Sobic002G081600 Sobic009G215200--Sobic001G018900 Sobic009G215200--Sobic007G197800 Sobic009G215200--Sobic001G403500 Sobic001G016400 Sobic001G016400 Sobic009G215200--Sobic001G016400 Sobic009G215200--Sobic001G374700 Sobic002G379500--Sobic009G050300 Sobic006G213000 Sobic006G213000 Sobic002G379500--Sobic006G213000 Sobic002G056200 Sobic002G056200 Sobic002G379500--Sobic002G056200 Sobic002G379500--Sobic001G403500 Sobic002G379500--Sobic006G116700 Sobic003G109600 Sobic003G109600 Sobic002G379500--Sobic003G109600 Sobic002G379500--Sobic007G197800 Sobic004G198400 Sobic004G198400 Sobic002G379500--Sobic004G198400 Sobic002G379500--Sobic004G008400
Octagon: transcription factors


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