Gene annotation
Transcriptome id Sobic.007G198000.1
Synonym AIR12, Sb07g026630
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
AIR12, putative, expressed
UniProt C5YI64
Pfam PF04526
Panther DB PTHR23130 PTHR23130:SF89
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07390 : auxin-responsive family protein
RAP-DB (Rice) LOC_Os08g41290.1 : AIR12, putative, expressed
MaizeGDB (Corn) Zm00025a005201 , Zm00025a030375
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G198000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G347900 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
2 Sobic.006G057200 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e
3 Sobic.001G529400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
4 Sobic.010G070500 60S ribosomal protein L35a-3, putative, expressed K02917: RP-L35Ae, large subunit ribosomal protein L35Ae
5 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
6 Sobic.010G047100 histone H3, putative, expressed K11253: histone H3
7 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
8 Sobic.003G027400 VQ domain containing protein, putative, expressed -
9 Sobic.003G379600 methyltransferase, putative, expressed -
10 Sobic.007G150800 expressed protein -
11 Sobic.004G055100 60S ribosomal protein, putative, expressed K02900: RP-L27Ae, large subunit ribosomal protein L27Ae
12 Sobic.001G493001 - K02979: RP-S28e, small subunit ribosomal protein S28e
13 Sobic.001G313200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
14 Sobic.006G191800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
15 Sobic.003G078200 ribosomal protein L24, putative, expressed K02898: RP-L26e, large subunit ribosomal protein L26e
16 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.006G137800 expressed protein -
18 Sobic.001G502900 nicotiana lesion-inducing like, putative, expressed -
19 Sobic.004G217450 - -
20 Sobic.002G276000 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A


Gene co-expression network
sample Sobic007G198000 Sobic007G198000 Sobic003G347900 Sobic003G347900 Sobic007G198000--Sobic003G347900 Sobic006G057200 Sobic006G057200 Sobic007G198000--Sobic006G057200 Sobic001G529400 Sobic001G529400 Sobic007G198000--Sobic001G529400 Sobic010G070500 Sobic010G070500 Sobic007G198000--Sobic010G070500 Sobic003G160700 Sobic003G160700 Sobic007G198000--Sobic003G160700 Sobic010G047100 Sobic010G047100 Sobic007G198000--Sobic010G047100 Sobic001G475500 Sobic001G475500 Sobic007G198000--Sobic001G475500 Sobic003G027400 Sobic003G027400 Sobic007G198000--Sobic003G027400 Sobic003G379600 Sobic003G379600 Sobic007G198000--Sobic003G379600 Sobic003G347900--Sobic006G057200 Sobic003G347900--Sobic007G198000 Sobic001G313200 Sobic001G313200 Sobic003G347900--Sobic001G313200 Sobic003G347900--Sobic001G529400 Sobic006G191800 Sobic006G191800 Sobic003G347900--Sobic006G191800 Sobic002G276000 Sobic002G276000 Sobic003G347900--Sobic002G276000 Sobic003G347900--Sobic010G047100 Sobic003G078200 Sobic003G078200 Sobic003G347900--Sobic003G078200 Sobic003G057100 Sobic003G057100 Sobic003G347900--Sobic003G057100 Sobic002G179300 Sobic002G179300 Sobic006G057200--Sobic002G179300 Sobic007G178600 Sobic007G178600 Sobic006G057200--Sobic007G178600 Sobic010G069400 Sobic010G069400 Sobic006G057200--Sobic010G069400 Sobic004G008400 Sobic004G008400 Sobic006G057200--Sobic004G008400 Sobic004G244800 Sobic004G244800 Sobic006G057200--Sobic004G244800 Sobic006G057200--Sobic010G070500 Sobic001G508900 Sobic001G508900 Sobic006G057200--Sobic001G508900 Sobic002G286900 Sobic002G286900 Sobic006G057200--Sobic002G286900 Sobic006G057200--Sobic003G078200 Sobic001G529400--Sobic001G313200 Sobic001G529400--Sobic010G047100 Sobic001G529400--Sobic006G191800 Sobic009G015900 Sobic009G015900 Sobic001G529400--Sobic009G015900 Sobic001G529400--Sobic003G347900 Sobic010G221300 Sobic010G221300 Sobic001G529400--Sobic010G221300 Sobic001G529400--Sobic003G078200 Sobic006G137800 Sobic006G137800 Sobic001G529400--Sobic006G137800 Sobic001G529400--Sobic003G057100 Sobic001G226500 Sobic001G226500 Sobic010G070500--Sobic001G226500 Sobic010G070500--Sobic004G008400 Sobic008G108601 Sobic008G108601 Sobic010G070500--Sobic008G108601 Sobic010G251600 Sobic010G251600 Sobic010G070500--Sobic010G251600 Sobic004G055100 Sobic004G055100 Sobic010G070500--Sobic004G055100 Sobic010G070500--Sobic002G179300 Sobic010G070500--Sobic002G286900 Sobic010G070500--Sobic003G078200 Sobic003G249700 Sobic003G249700 Sobic010G070500--Sobic003G249700 Sobic005G113300 Sobic005G113300 Sobic003G160700--Sobic005G113300 Sobic004G041900 Sobic004G041900 Sobic003G160700--Sobic004G041900 Sobic003G125650 Sobic003G125650 Sobic003G160700--Sobic003G125650 Sobic003G160700--Sobic003G078200 Sobic003G160700--Sobic001G475500 Sobic001G502900 Sobic001G502900 Sobic003G160700--Sobic001G502900 Sobic004G220000 Sobic004G220000 Sobic003G160700--Sobic004G220000 Sobic009G188000 Sobic009G188000 Sobic003G160700--Sobic009G188000 Sobic003G436700 Sobic003G436700 Sobic003G160700--Sobic003G436700 Sobic010G047100--Sobic001G313200 Sobic010G047100--Sobic001G529400 Sobic010G047100--Sobic004G041900 Sobic010G047100--Sobic006G191800 Sobic010G047100--Sobic010G221300 Sobic001G031700 Sobic001G031700 Sobic010G047100--Sobic001G031700 Sobic010G047100--Sobic003G160700 Sobic003G322532 Sobic003G322532 Sobic010G047100--Sobic003G322532 Sobic010G047100--Sobic003G125650 Sobic001G475500--Sobic001G502900 Sobic001G475500--Sobic003G160700 Sobic003G122200 Sobic003G122200 Sobic001G475500--Sobic003G122200 Sobic001G475500--Sobic005G113300 Sobic007G150800 Sobic007G150800 Sobic001G475500--Sobic007G150800 Sobic009G173500 Sobic009G173500 Sobic001G475500--Sobic009G173500 Sobic001G361600 Sobic001G361600 Sobic001G475500--Sobic001G361600 Sobic001G475500--Sobic004G220000 Sobic003G117500 Sobic003G117500 Sobic001G475500--Sobic003G117500 Sobic003G027400--Sobic003G160700 Sobic006G249300 Sobic006G249300 Sobic003G027400--Sobic006G249300 Sobic009G248100 Sobic009G248100 Sobic003G027400--Sobic009G248100 Sobic003G027400--Sobic010G221300 Sobic001G481000 Sobic001G481000 Sobic003G027400--Sobic001G481000 Sobic003G027400--Sobic005G113300 Sobic002G387900 Sobic002G387900 Sobic003G027400--Sobic002G387900 Sobic003G084400 Sobic003G084400 Sobic003G027400--Sobic003G084400 Sobic002G200600 Sobic002G200600 Sobic003G027400--Sobic002G200600 Sobic003G379600--Sobic006G137800 Sobic003G379600--Sobic007G198000 Sobic001G533000 Sobic001G533000 Sobic003G379600--Sobic001G533000 Sobic001G459900 Sobic001G459900 Sobic003G379600--Sobic001G459900 Sobic003G379600--Sobic001G475500 Sobic006G159600 Sobic006G159600 Sobic003G379600--Sobic006G159600 Sobic004G217450 Sobic004G217450 Sobic003G379600--Sobic004G217450 Sobic003G379600--Sobic003G160700 Sobic004G345500 Sobic004G345500 Sobic003G379600--Sobic004G345500
Octagon: transcription factors


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