Gene annotation
Transcriptome id Sobic.003G379600.1
Synonym Sb03g041910
Functional annotation methyltransferase, putative, expressed
UniProt C5XEL9
Pfam PF03141
Panther DB PTHR10108 PTHR10108:SF926
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT5G64030 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os01g66110.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a039491 , Zm00025a026547
Brachypodium PNT73329 , KQK10923 , KQK10922 , KQK10925 , KQK10924 , PNT73330 , PNT73331
Barley HORVU3Hr1G090970.10 , HORVU3Hr1G090970.2 , HORVU3Hr1G090970.3 , HORVU3Hr1G090970.4 , HORVU3Hr1G090970.5 , HORVU3Hr1G090970.6 , HORVU3Hr1G090970.7 , HORVU3Hr1G090970.8 , HORVU3Hr1G090970.1 , HORVU3Hr1G090970.9
Wheat TraesCS3D02G401300 , TraesCS3A02G406100 , TraesCS3A02G406100 , TraesCS3B02G439800 , TraesCS3D02G401300 , TraesCS3B02G439800 , TraesCS3B02G439800
Populus PNT28196 , PNT28194 , PNT28195 , PNT48372 , PNT37367 , PNT37366 , PNT37368 , PNT36287


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G137800 expressed protein -
2 Sobic.007G198000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AIR12, putative, expressed -
3 Sobic.001G533000 expressed protein -
4 Sobic.001G459900 leucine-rich repeat resistance protein, putative, expressed -
5 Sobic.001G475500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
6 Sobic.006G159600 cytochrome b561, putative, expressed K08360: cytochrome b-561
7 Sobic.004G217450 - -
8 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
9 Sobic.004G345500 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
10 Sobic.007G150800 expressed protein -
11 Sobic.007G195800 uncharacterized protein family UPF0016 domain containing protein, expressed -
12 Sobic.001G399300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphotase protein, putative, expressed -
13 Sobic.001G502900 nicotiana lesion-inducing like, putative, expressed -
14 Sobic.001G014000 P21-Rho-binding domain containing protein, putative, expressed -
15 Sobic.003G027400 VQ domain containing protein, putative, expressed -
16 Sobic.002G201600 methyltransferase, putative, expressed -
17 Sobic.004G171400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.002G128800 fiber protein Fb34, putative, expressed -
19 Sobic.008G025600 cyclin-dependent kinase B1-1, putative, expressed K07760: cyclin-dependent kinase
20 Sobic.001G115300 RNA recognition motif containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G379600 Sobic003G379600 Sobic006G137800 Sobic006G137800 Sobic003G379600--Sobic006G137800 Sobic007G198000 Sobic007G198000 Sobic003G379600--Sobic007G198000 Sobic001G533000 Sobic001G533000 Sobic003G379600--Sobic001G533000 Sobic001G459900 Sobic001G459900 Sobic003G379600--Sobic001G459900 Sobic001G475500 Sobic001G475500 Sobic003G379600--Sobic001G475500 Sobic006G159600 Sobic006G159600 Sobic003G379600--Sobic006G159600 Sobic004G217450 Sobic004G217450 Sobic003G379600--Sobic004G217450 Sobic003G160700 Sobic003G160700 Sobic003G379600--Sobic003G160700 Sobic004G345500 Sobic004G345500 Sobic003G379600--Sobic004G345500 Sobic009G159400 Sobic009G159400 Sobic006G137800--Sobic009G159400 Sobic008G025600 Sobic008G025600 Sobic006G137800--Sobic008G025600 Sobic004G321300 Sobic004G321300 Sobic006G137800--Sobic004G321300 Sobic001G140900 Sobic001G140900 Sobic006G137800--Sobic001G140900 Sobic002G200600 Sobic002G200600 Sobic006G137800--Sobic002G200600 Sobic001G038900 Sobic001G038900 Sobic006G137800--Sobic001G038900 Sobic008G050600 Sobic008G050600 Sobic006G137800--Sobic008G050600 Sobic006G137800--Sobic006G159600 Sobic003G345100 Sobic003G345100 Sobic006G137800--Sobic003G345100 Sobic003G347900 Sobic003G347900 Sobic007G198000--Sobic003G347900 Sobic006G057200 Sobic006G057200 Sobic007G198000--Sobic006G057200 Sobic001G529400 Sobic001G529400 Sobic007G198000--Sobic001G529400 Sobic010G070500 Sobic010G070500 Sobic007G198000--Sobic010G070500 Sobic007G198000--Sobic003G160700 Sobic010G047100 Sobic010G047100 Sobic007G198000--Sobic010G047100 Sobic007G198000--Sobic001G475500 Sobic003G027400 Sobic003G027400 Sobic007G198000--Sobic003G027400 Sobic007G198000--Sobic003G379600 Sobic001G533000--Sobic003G379600 Sobic001G533000--Sobic006G137800 Sobic001G533000--Sobic004G345500 Sobic001G533000--Sobic007G198000 Sobic001G533000--Sobic001G529400 Sobic003G078200 Sobic003G078200 Sobic001G533000--Sobic003G078200 Sobic001G533000--Sobic010G047100 Sobic004G171400 Sobic004G171400 Sobic001G533000--Sobic004G171400 Sobic001G533000--Sobic003G160700 Sobic010G023800 Sobic010G023800 Sobic001G459900--Sobic010G023800 Sobic009G212200 Sobic009G212200 Sobic001G459900--Sobic009G212200 Sobic001G281300 Sobic001G281300 Sobic001G459900--Sobic001G281300 Sobic001G459900--Sobic003G379600 Sobic001G334300 Sobic001G334300 Sobic001G459900--Sobic001G334300 Sobic010G060500 Sobic010G060500 Sobic001G459900--Sobic010G060500 Sobic004G231300 Sobic004G231300 Sobic001G459900--Sobic004G231300 Sobic001G014000 Sobic001G014000 Sobic001G459900--Sobic001G014000 Sobic009G144300 Sobic009G144300 Sobic001G459900--Sobic009G144300 Sobic001G502900 Sobic001G502900 Sobic001G475500--Sobic001G502900 Sobic001G475500--Sobic003G160700 Sobic003G122200 Sobic003G122200 Sobic001G475500--Sobic003G122200 Sobic005G113300 Sobic005G113300 Sobic001G475500--Sobic005G113300 Sobic007G150800 Sobic007G150800 Sobic001G475500--Sobic007G150800 Sobic009G173500 Sobic009G173500 Sobic001G475500--Sobic009G173500 Sobic001G361600 Sobic001G361600 Sobic001G475500--Sobic001G361600 Sobic004G220000 Sobic004G220000 Sobic001G475500--Sobic004G220000 Sobic003G117500 Sobic003G117500 Sobic001G475500--Sobic003G117500 Sobic006G159600--Sobic006G137800 Sobic002G348100 Sobic002G348100 Sobic006G159600--Sobic002G348100 Sobic003G125650 Sobic003G125650 Sobic006G159600--Sobic003G125650 Sobic006G067800 Sobic006G067800 Sobic006G159600--Sobic006G067800 Sobic006G159600--Sobic004G321300 Sobic006G159600--Sobic008G025600 Sobic007G197800 Sobic007G197800 Sobic006G159600--Sobic007G197800 Sobic006G159600--Sobic009G159400 Sobic001G464900 Sobic001G464900 Sobic006G159600--Sobic001G464900 Sobic002G385400 Sobic002G385400 Sobic004G217450--Sobic002G385400 Sobic003G034600 Sobic003G034600 Sobic004G217450--Sobic003G034600 Sobic003G279100 Sobic003G279100 Sobic004G217450--Sobic003G279100 Sobic006G149200 Sobic006G149200 Sobic004G217450--Sobic006G149200 Sobic004G274900 Sobic004G274900 Sobic004G217450--Sobic004G274900 Sobic004G217450--Sobic007G198000 Sobic003G174700 Sobic003G174700 Sobic004G217450--Sobic003G174700 Sobic004G217450--Sobic008G025600 Sobic006G115000 Sobic006G115000 Sobic004G217450--Sobic006G115000 Sobic003G160700--Sobic005G113300 Sobic004G041900 Sobic004G041900 Sobic003G160700--Sobic004G041900 Sobic003G160700--Sobic003G125650 Sobic003G160700--Sobic003G078200 Sobic003G160700--Sobic001G475500 Sobic003G160700--Sobic001G502900 Sobic003G160700--Sobic004G220000 Sobic009G188000 Sobic009G188000 Sobic003G160700--Sobic009G188000 Sobic003G436700 Sobic003G436700 Sobic003G160700--Sobic003G436700 Sobic004G345500--Sobic003G160700 Sobic004G345500--Sobic001G502900 Sobic004G345500--Sobic005G113300 Sobic004G345500--Sobic001G475500 Sobic001G031700 Sobic001G031700 Sobic004G345500--Sobic001G031700 Sobic004G345500--Sobic003G125650 Sobic001G295200 Sobic001G295200 Sobic004G345500--Sobic001G295200 Sobic010G221300 Sobic010G221300 Sobic004G345500--Sobic010G221300 Sobic004G345500--Sobic007G197800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.