Gene annotation
Transcriptome id Sobic.004G171400.1
Synonym Sb04g022250, ATGSTF13
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
glutathione S-transferase, putative, expressed
UniProt C5XU49
Pfam PF00043 PF02798
Panther DB PTHR11260 PTHR11260:SF190
NCBI CDD KOG0867; Glutathione S-transferase
KEGG Orthology K00799; GST, glutathione S-transferase
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G62760 : Glutathione S-transferase family protein
RAP-DB (Rice) LOC_Os01g27360.1 : glutathione S-transferase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU2Hr1G095460.1 , HORVU1Hr1G021160.5 , HORVU1Hr1G021160.4 , HORVU1Hr1G021160.3 , HORVU1Hr1G021160.2
Wheat TraesCS5D02G418100 , TraesCS5D02G268900 , TraesCS1A02G102900 , TraesCS3B02G152200 , TraesCS2A02G045400 , TraesCS2A02G045400 , TraesCS2D02G400000 , TraesCS2D02G400000 , TraesCS2B02G420800 , TraesCS4B02G059300 , TraesCS1D02G095000 , TraesCS3B02G152300 , TraesCS3B02G152300 , TraesCS5A02G432600 , TraesCS3B02G152200 , TraesCS4B02G059100 , TraesCS4B02G059100 , TraesCS5B02G259700 , TraesCS1B02G113800 , TraesCS2D02G044100
Populus -


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cDNA sequences
Sobic.004G171400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.003G393900 Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
3 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
4 Sobic.001G140900 helix-loop-helix DNA-binding protein, putative, expressed -
5 Sobic.004G100700 ethylene-responsive transcription factor TINY, putative, expressed K09286: EREBP-like factor
6 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
7 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
8 Sobic.002G188900 cytokinin-O-glucosyltransferase 1, putative, expressed -
9 Sobic.003G369100 AP2 domain containing protein, expressed -
10 Sobic.003G432700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@secreted glycoprotein, putative, expressed -
11 Sobic.002G389400 OsRCI2-10 - Hydrophobic protein LTI6A, expressed -
12 Sobic.001G169500 - -
13 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
14 Sobic.001G435000 gibberellin receptor GID1L2, putative, expressed -
15 Sobic.004G065500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
16 Sobic.001G108200 expressed protein -
17 Sobic.001G318700 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
20 Sobic.004G321300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor


Gene co-expression network
sample Sobic004G171400 Sobic004G171400 Sobic005G011300 Sobic005G011300 Sobic004G171400--Sobic005G011300 Sobic003G393900 Sobic003G393900 Sobic004G171400--Sobic003G393900 Sobic004G141200 Sobic004G141200 Sobic004G171400--Sobic004G141200 Sobic001G140900 Sobic001G140900 Sobic004G171400--Sobic001G140900 Sobic004G100700 Sobic004G100700 Sobic004G171400--Sobic004G100700 Sobic003G228900 Sobic003G228900 Sobic004G171400--Sobic003G228900 Sobic001G459800 Sobic001G459800 Sobic004G171400--Sobic001G459800 Sobic002G188900 Sobic002G188900 Sobic004G171400--Sobic002G188900 Sobic003G369100 Sobic003G369100 Sobic004G171400--Sobic003G369100 Sobic005G011300--Sobic004G100700 Sobic001G169500 Sobic001G169500 Sobic005G011300--Sobic001G169500 Sobic005G011300--Sobic002G188900 Sobic005G107900 Sobic005G107900 Sobic005G011300--Sobic005G107900 Sobic003G432700 Sobic003G432700 Sobic005G011300--Sobic003G432700 Sobic005G011300--Sobic004G141200 Sobic005G011300--Sobic001G140900 Sobic003G084400 Sobic003G084400 Sobic005G011300--Sobic003G084400 Sobic005G011300--Sobic004G171400 Sobic003G393900--Sobic004G141200 Sobic001G108200 Sobic001G108200 Sobic003G393900--Sobic001G108200 Sobic003G393900--Sobic001G459800 Sobic003G393900--Sobic004G100700 Sobic003G393900--Sobic002G188900 Sobic004G065500 Sobic004G065500 Sobic003G393900--Sobic004G065500 Sobic006G267200 Sobic006G267200 Sobic003G393900--Sobic006G267200 Sobic003G393900--Sobic005G011300 Sobic003G393900--Sobic003G369100 Sobic004G141200--Sobic003G369100 Sobic004G141200--Sobic001G108200 Sobic007G074000 Sobic007G074000 Sobic004G141200--Sobic007G074000 Sobic004G141200--Sobic003G393900 Sobic004G141200--Sobic001G459800 Sobic004G304625 Sobic004G304625 Sobic004G141200--Sobic004G304625 Sobic001G138600 Sobic001G138600 Sobic004G141200--Sobic001G138600 Sobic001G391500 Sobic001G391500 Sobic004G141200--Sobic001G391500 Sobic004G141200--Sobic004G100700 Sobic008G050600 Sobic008G050600 Sobic001G140900--Sobic008G050600 Sobic003G345100 Sobic003G345100 Sobic001G140900--Sobic003G345100 Sobic001G038900 Sobic001G038900 Sobic001G140900--Sobic001G038900 Sobic005G063100 Sobic005G063100 Sobic001G140900--Sobic005G063100 Sobic001G140900--Sobic004G100700 Sobic001G140900--Sobic003G369100 Sobic001G367600 Sobic001G367600 Sobic001G140900--Sobic001G367600 Sobic008G136400 Sobic008G136400 Sobic001G140900--Sobic008G136400 Sobic001G140900--Sobic004G141200 Sobic004G100700--Sobic005G011300 Sobic004G100700--Sobic002G188900 Sobic004G100700--Sobic001G140900 Sobic004G100700--Sobic001G108200 Sobic004G100700--Sobic001G169500 Sobic004G100700--Sobic004G141200 Sobic004G100700--Sobic003G393900 Sobic004G301000 Sobic004G301000 Sobic004G100700--Sobic004G301000 Sobic004G100700--Sobic001G367600 Sobic006G075400 Sobic006G075400 Sobic003G228900--Sobic006G075400 Sobic010G209200 Sobic010G209200 Sobic003G228900--Sobic010G209200 Sobic009G184000 Sobic009G184000 Sobic003G228900--Sobic009G184000 Sobic004G191400 Sobic004G191400 Sobic003G228900--Sobic004G191400 Sobic003G228900--Sobic003G432700 Sobic003G260300 Sobic003G260300 Sobic003G228900--Sobic003G260300 Sobic007G017500 Sobic007G017500 Sobic003G228900--Sobic007G017500 Sobic009G122400 Sobic009G122400 Sobic003G228900--Sobic009G122400 Sobic001G079300 Sobic001G079300 Sobic003G228900--Sobic001G079300 Sobic001G459800--Sobic001G391500 Sobic001G459800--Sobic006G267200 Sobic001G459800--Sobic004G141200 Sobic001G459800--Sobic003G393900 Sobic001G459800--Sobic003G228900 Sobic001G459800--Sobic004G065500 Sobic001G459800--Sobic001G138600 Sobic001G459800--Sobic007G074000 Sobic001G459800--Sobic005G011300 Sobic002G188900--Sobic004G100700 Sobic002G188900--Sobic005G011300 Sobic003G033900 Sobic003G033900 Sobic002G188900--Sobic003G033900 Sobic002G188900--Sobic001G140900 Sobic002G188900--Sobic004G141200 Sobic002G188900--Sobic003G393900 Sobic002G188900--Sobic001G108200 Sobic002G188900--Sobic004G304625 Sobic007G057000 Sobic007G057000 Sobic002G188900--Sobic007G057000 Sobic003G369100--Sobic004G141200 Sobic003G369100--Sobic007G074000 Sobic003G369100--Sobic001G138600 Sobic003G369100--Sobic001G108200 Sobic003G369100--Sobic001G140900 Sobic001G112200 Sobic001G112200 Sobic003G369100--Sobic001G112200 Sobic003G369100--Sobic003G345100 Sobic003G369100--Sobic008G050600 Sobic001G308300 Sobic001G308300 Sobic003G369100--Sobic001G308300
Octagon: transcription factors


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