Gene annotation
Transcriptome id Sobic.001G014000.1,Sobic.001G014000.2,Sobic.001G014000.3
Synonym Sb01g001370, RIC4
Functional annotation P21-Rho-binding domain containing protein, putative, expressed
UniProt C5WSY1 , A0A1Z5S3T9 , A0A1Z5S3V1
Pfam PF00786
Panther DB PTHR23177 PTHR23177:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G28556 : ROP-interactive CRIB motif-containing protein 4,PAK-box/P21-Rho-binding family protein
RAP-DB (Rice) LOC_Os03g63060.1 : P21-Rho-binding domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a009018
Brachypodium -
Barley -
Wheat TraesCS4A02G337000 , TraesCS4A02G337100 , TraesCS4A02G337200 , TraesCS5D02G534200
Populus -


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cDNA sequences
Sobic.001G014000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G436700 40S ribosomal protein S10, putative, expressed K02947: RP-S10e, small subunit ribosomal protein S10e
2 Sobic.003G062600 limonoid UDP-glucosyltransferase, putative, expressed -
3 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
4 Sobic.006G044100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
5 Sobic.003G418766 - -
6 Sobic.008G106700 isoflavone reductase, putative, expressed -
7 Sobic.006G136800 "shikimate hydroxycinnamoyl transferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
8 Sobic.010G063801 - K02924: RP-L39e, large subunit ribosomal protein L39e
9 Sobic.009G105700 60S ribosomal protein L29-2, putative, expressed K02905: RP-L29e, large subunit ribosomal protein L29e
10 Sobic.007G184600 60S ribosomal protein L38, putative, expressed K02923: RP-L38e, large subunit ribosomal protein L38e
11 Sobic.003G416300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.007G178600 - K02966: RP-S19e, small subunit ribosomal protein S19e
13 Sobic.004G264000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
14 Sobic.003G050200 embryo-specific 3, putative, expressed -
15 Sobic.003G417800 down-regulated TF in developmental senescence(PubMedID : 27586543)@histone-like transcription factor and archaeal histone, putative, expressed -
16 Sobic.010G251600 60S acidic ribosomal protein, putative, expressed K02942: RP-LP1, large subunit ribosomal protein LP1
17 Sobic.004G008400 ribosomal protein L37, putative, expressed K02922: RP-L37e, large subunit ribosomal protein L37e
18 Sobic.003G346600 40S ribosomal protein S23, putative, expressed K02973: RP-S23e, small subunit ribosomal protein S23e
19 Sobic.010G008400 bark storage protein A precursor, putative, expressed -
20 Sobic.009G179900 OsCML9 - Calmodulin-related calcium sensor protein, expressed K02183: calmodulin


Gene co-expression network
sample Sobic001G014000 Sobic001G014000 Sobic003G436700 Sobic003G436700 Sobic001G014000--Sobic003G436700 Sobic003G062600 Sobic003G062600 Sobic001G014000--Sobic003G062600 Sobic004G046200 Sobic004G046200 Sobic001G014000--Sobic004G046200 Sobic006G044100 Sobic006G044100 Sobic001G014000--Sobic006G044100 Sobic003G418766 Sobic003G418766 Sobic001G014000--Sobic003G418766 Sobic008G106700 Sobic008G106700 Sobic001G014000--Sobic008G106700 Sobic006G136800 Sobic006G136800 Sobic001G014000--Sobic006G136800 Sobic010G063801 Sobic010G063801 Sobic001G014000--Sobic010G063801 Sobic009G105700 Sobic009G105700 Sobic001G014000--Sobic009G105700 Sobic004G008400 Sobic004G008400 Sobic003G436700--Sobic004G008400 Sobic006G116700 Sobic006G116700 Sobic003G436700--Sobic006G116700 Sobic009G050300 Sobic009G050300 Sobic003G436700--Sobic009G050300 Sobic010G251600 Sobic010G251600 Sobic003G436700--Sobic010G251600 Sobic006G067800 Sobic006G067800 Sobic003G436700--Sobic006G067800 Sobic007G178600 Sobic007G178600 Sobic003G436700--Sobic007G178600 Sobic002G081600 Sobic002G081600 Sobic003G436700--Sobic002G081600 Sobic009G215200 Sobic009G215200 Sobic003G436700--Sobic009G215200 Sobic002G379500 Sobic002G379500 Sobic003G436700--Sobic002G379500 Sobic003G417800 Sobic003G417800 Sobic003G062600--Sobic003G417800 Sobic003G437200 Sobic003G437200 Sobic003G062600--Sobic003G437200 Sobic001G119400 Sobic001G119400 Sobic003G062600--Sobic001G119400 Sobic004G107700 Sobic004G107700 Sobic003G062600--Sobic004G107700 Sobic009G183400 Sobic009G183400 Sobic003G062600--Sobic009G183400 Sobic003G062600--Sobic006G044100 Sobic005G183100 Sobic005G183100 Sobic003G062600--Sobic005G183100 Sobic003G255200 Sobic003G255200 Sobic003G062600--Sobic003G255200 Sobic004G176600 Sobic004G176600 Sobic003G062600--Sobic004G176600 Sobic004G046200--Sobic008G106700 Sobic004G046200--Sobic006G044100 Sobic009G187200 Sobic009G187200 Sobic004G046200--Sobic009G187200 Sobic006G199800 Sobic006G199800 Sobic004G046200--Sobic006G199800 Sobic003G084400 Sobic003G084400 Sobic004G046200--Sobic003G084400 Sobic004G046200--Sobic003G255200 Sobic001G500000 Sobic001G500000 Sobic004G046200--Sobic001G500000 Sobic003G079400 Sobic003G079400 Sobic004G046200--Sobic003G079400 Sobic009G111000 Sobic009G111000 Sobic004G046200--Sobic009G111000 Sobic006G044100--Sobic004G046200 Sobic006G044100--Sobic004G176600 Sobic006G044100--Sobic009G187200 Sobic001G481400 Sobic001G481400 Sobic006G044100--Sobic001G481400 Sobic006G044100--Sobic008G106700 Sobic003G366600 Sobic003G366600 Sobic006G044100--Sobic003G366600 Sobic008G172600 Sobic008G172600 Sobic006G044100--Sobic008G172600 Sobic006G277600 Sobic006G277600 Sobic006G044100--Sobic006G277600 Sobic006G044100--Sobic003G255200 Sobic003G418766--Sobic001G014000 Sobic003G418766--Sobic003G062600 Sobic007G184600 Sobic007G184600 Sobic003G418766--Sobic007G184600 Sobic002G366600 Sobic002G366600 Sobic003G418766--Sobic002G366600 Sobic003G418766--Sobic004G046200 Sobic003G418766--Sobic009G105700 Sobic003G418766--Sobic003G417800 Sobic003G418766--Sobic003G255200 Sobic003G418766--Sobic008G106700 Sobic008G106700--Sobic004G046200 Sobic008G106700--Sobic001G500000 Sobic008G106700--Sobic006G044100 Sobic008G106700--Sobic003G084400 Sobic008G106700--Sobic003G079400 Sobic008G106700--Sobic009G183400 Sobic009G179900 Sobic009G179900 Sobic008G106700--Sobic009G179900 Sobic001G139100 Sobic001G139100 Sobic008G106700--Sobic001G139100 Sobic008G106700--Sobic006G199800 Sobic006G136800--Sobic004G046200 Sobic006G136800--Sobic002G081600 Sobic006G136800--Sobic003G436700 Sobic001G295200 Sobic001G295200 Sobic006G136800--Sobic001G295200 Sobic001G036900 Sobic001G036900 Sobic006G136800--Sobic001G036900 Sobic004G205100 Sobic004G205100 Sobic006G136800--Sobic004G205100 Sobic004G340900 Sobic004G340900 Sobic006G136800--Sobic004G340900 Sobic001G389000 Sobic001G389000 Sobic006G136800--Sobic001G389000 Sobic006G136800--Sobic001G500000 Sobic010G063801--Sobic002G081600 Sobic002G200600 Sobic002G200600 Sobic010G063801--Sobic002G200600 Sobic010G063801--Sobic006G116700 Sobic010G063801--Sobic010G251600 Sobic001G130301 Sobic001G130301 Sobic010G063801--Sobic001G130301 Sobic010G063801--Sobic003G436700 Sobic010G063801--Sobic009G105700 Sobic010G063801--Sobic009G215200 Sobic001G374700 Sobic001G374700 Sobic010G063801--Sobic001G374700 Sobic004G331400 Sobic004G331400 Sobic009G105700--Sobic004G331400 Sobic001G376600 Sobic001G376600 Sobic009G105700--Sobic001G376600 Sobic002G175100 Sobic002G175100 Sobic009G105700--Sobic002G175100 Sobic006G047400 Sobic006G047400 Sobic009G105700--Sobic006G047400 Sobic003G322400 Sobic003G322400 Sobic009G105700--Sobic003G322400 Sobic003G346600 Sobic003G346600 Sobic009G105700--Sobic003G346600 Sobic001G493001 Sobic001G493001 Sobic009G105700--Sobic001G493001 Sobic009G105600 Sobic009G105600 Sobic009G105700--Sobic009G105600 Sobic009G105700--Sobic010G063801
Octagon: transcription factors


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