Gene annotation
Transcriptome id Sobic.004G264000.1
Synonym CRK10, RLK4, Sb04g030210
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed
UniProt C5Y083
Pfam PF07714
Panther DB PTHR27002 PTHR27002:SF21
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G21390 : S-locus lectin protein kinase family protein
RAP-DB (Rice) LOC_Os02g48080.1 : cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a006256 , Zm00025a021759 , Zm00025a014511 , Zm00025a050688 , Zm00025a027259
Brachypodium KQK15900 , KQK00979 , KQK18436 , PNT74980 , KQK15901
Barley HORVU5Hr1G087240.1 , HORVU5Hr1G087240.2 , HORVU7Hr1G046620.12 , HORVU7Hr1G046620.11 , HORVU7Hr1G046620.10 , HORVU4Hr1G028410.1 , HORVU0Hr1G014650.3 , HORVU5Hr1G124170.2 , HORVU5Hr1G124170.3 , HORVU5Hr1G124170.1 , HORVU6Hr1G069710.15 , HORVU6Hr1G069710.14 , HORVU6Hr1G069710.17 , HORVU6Hr1G069710.16 , HORVU6Hr1G069710.11 , HORVU6Hr1G069710.10 , HORVU6Hr1G069710.13 , HORVU6Hr1G069710.12 , HORVU6Hr1G069710.18 , HORVU6Hr1G069710.1 , HORVU6Hr1G069710.3 , HORVU6Hr1G069710.2 , HORVU6Hr1G069710.5 , HORVU6Hr1G069710.4 , HORVU6Hr1G069710.7 , HORVU6Hr1G069710.6 , HORVU6Hr1G069710.9 , HORVU6Hr1G069710.8 , HORVU7Hr1G046620.9 , HORVU7Hr1G046620.8 , HORVU0Hr1G014650.2
Wheat TraesCS7D02G230500 , TraesCS5B02G353400 , TraesCS6B02G236500 , TraesCS1B02G341600 , TraesCS7B02G195700 , TraesCS7A02G229600 , TraesCS7A02G229600 , TraesCS7B02G195500 , TraesCS1D02G330300 , TraesCS1D02G330300 , TraesCS1D02G330300 , TraesCS5B02G353300 , TraesCS6B02G303800 , TraesCS6A02G276300 , TraesCS6A02G276300 , TraesCS6A02G276300 , TraesCS7A02G229800 , TraesCS5D02G357800 , TraesCS6D02G256700 , TraesCS6D02G256700 , TraesCS5A02G350800 , TraesCS7D02G230200 , TraesCS5A02G350700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G481400 similar to AP2 domain containing protein(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@similar to AP2 domain containing protein(PubMedID : 24655390)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
2 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
3 Sobic.010G184800 heme oxygenase 1, putative, expressed K00510: heme oxygenase 1
4 Sobic.002G287100 flavin-containing monooxygenase family protein, putative, expressed -
5 Sobic.007G169900 male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
6 Sobic.008G186100 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.001G500000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.006G044100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
9 Sobic.006G136800 "shikimate hydroxycinnamoyl transferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
10 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.009G240600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase, putative, expressed -
12 Sobic.001G476500 helix-loop-helix DNA-binding protein, putative, expressed -
13 Sobic.002G081600 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
14 Sobic.001G014000 P21-Rho-binding domain containing protein, putative, expressed -
15 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
16 Sobic.010G008400 bark storage protein A precursor, putative, expressed -
17 Sobic.010G067400 receptor-like protein kinase precursor, putative, expressed -
18 Sobic.006G092500 expressed protein -
19 Sobic.010G239500 ubiquitin family protein, putative, expressed K08770: ubiquitin C
20 Sobic.007G184600 60S ribosomal protein L38, putative, expressed K02923: RP-L38e, large subunit ribosomal protein L38e


Gene co-expression network
sample Sobic004G264000 Sobic004G264000 Sobic001G481400 Sobic001G481400 Sobic004G264000--Sobic001G481400 Sobic004G046200 Sobic004G046200 Sobic004G264000--Sobic004G046200 Sobic010G184800 Sobic010G184800 Sobic004G264000--Sobic010G184800 Sobic002G287100 Sobic002G287100 Sobic004G264000--Sobic002G287100 Sobic007G169900 Sobic007G169900 Sobic004G264000--Sobic007G169900 Sobic008G186100 Sobic008G186100 Sobic004G264000--Sobic008G186100 Sobic001G500000 Sobic001G500000 Sobic004G264000--Sobic001G500000 Sobic006G044100 Sobic006G044100 Sobic004G264000--Sobic006G044100 Sobic006G136800 Sobic006G136800 Sobic004G264000--Sobic006G136800 Sobic009G240600 Sobic009G240600 Sobic001G481400--Sobic009G240600 Sobic001G481400--Sobic001G500000 Sobic001G231700 Sobic001G231700 Sobic001G481400--Sobic001G231700 Sobic001G476500 Sobic001G476500 Sobic001G481400--Sobic001G476500 Sobic001G481400--Sobic004G046200 Sobic003G417800 Sobic003G417800 Sobic001G481400--Sobic003G417800 Sobic001G481400--Sobic006G044100 Sobic001G481400--Sobic002G287100 Sobic006G277600 Sobic006G277600 Sobic001G481400--Sobic006G277600 Sobic008G106700 Sobic008G106700 Sobic004G046200--Sobic008G106700 Sobic004G046200--Sobic006G044100 Sobic009G187200 Sobic009G187200 Sobic004G046200--Sobic009G187200 Sobic006G199800 Sobic006G199800 Sobic004G046200--Sobic006G199800 Sobic003G084400 Sobic003G084400 Sobic004G046200--Sobic003G084400 Sobic003G255200 Sobic003G255200 Sobic004G046200--Sobic003G255200 Sobic004G046200--Sobic001G500000 Sobic003G079400 Sobic003G079400 Sobic004G046200--Sobic003G079400 Sobic009G111000 Sobic009G111000 Sobic004G046200--Sobic009G111000 Sobic001G304100 Sobic001G304100 Sobic010G184800--Sobic001G304100 Sobic010G184800--Sobic009G111000 Sobic001G049900 Sobic001G049900 Sobic010G184800--Sobic001G049900 Sobic010G029700 Sobic010G029700 Sobic010G184800--Sobic010G029700 Sobic010G184800--Sobic008G186100 Sobic010G184800--Sobic001G231700 Sobic002G176100 Sobic002G176100 Sobic010G184800--Sobic002G176100 Sobic010G184800--Sobic004G046200 Sobic006G234800 Sobic006G234800 Sobic010G184800--Sobic006G234800 Sobic002G287100--Sobic001G500000 Sobic002G287100--Sobic008G186100 Sobic002G287100--Sobic001G476500 Sobic002G287100--Sobic009G240600 Sobic009G033300 Sobic009G033300 Sobic002G287100--Sobic009G033300 Sobic002G287100--Sobic001G481400 Sobic009G183400 Sobic009G183400 Sobic002G287100--Sobic009G183400 Sobic002G287100--Sobic010G029700 Sobic006G092500 Sobic006G092500 Sobic002G287100--Sobic006G092500 Sobic007G169900--Sobic001G231700 Sobic004G349125 Sobic004G349125 Sobic007G169900--Sobic004G349125 Sobic007G169900--Sobic006G199800 Sobic010G067400 Sobic010G067400 Sobic007G169900--Sobic010G067400 Sobic009G106400 Sobic009G106400 Sobic007G169900--Sobic009G106400 Sobic007G169900--Sobic003G084400 Sobic007G169900--Sobic010G184800 Sobic007G169900--Sobic001G476500 Sobic007G169900--Sobic004G046200 Sobic005G011300 Sobic005G011300 Sobic008G186100--Sobic005G011300 Sobic008G186100--Sobic002G287100 Sobic004G100700 Sobic004G100700 Sobic008G186100--Sobic004G100700 Sobic001G169500 Sobic001G169500 Sobic008G186100--Sobic001G169500 Sobic008G186100--Sobic010G029700 Sobic006G249300 Sobic006G249300 Sobic008G186100--Sobic006G249300 Sobic001G139100 Sobic001G139100 Sobic008G186100--Sobic001G139100 Sobic002G250000 Sobic002G250000 Sobic008G186100--Sobic002G250000 Sobic008G186100--Sobic006G092500 Sobic001G500000--Sobic003G084400 Sobic001G500000--Sobic002G287100 Sobic001G500000--Sobic001G481400 Sobic001G500000--Sobic009G240600 Sobic001G500000--Sobic004G046200 Sobic001G367600 Sobic001G367600 Sobic001G500000--Sobic001G367600 Sobic001G500000--Sobic009G111000 Sobic001G500000--Sobic001G231700 Sobic006G103000 Sobic006G103000 Sobic001G500000--Sobic006G103000 Sobic006G044100--Sobic004G046200 Sobic004G176600 Sobic004G176600 Sobic006G044100--Sobic004G176600 Sobic006G044100--Sobic009G187200 Sobic006G044100--Sobic001G481400 Sobic006G044100--Sobic008G106700 Sobic003G366600 Sobic003G366600 Sobic006G044100--Sobic003G366600 Sobic008G172600 Sobic008G172600 Sobic006G044100--Sobic008G172600 Sobic006G044100--Sobic006G277600 Sobic006G044100--Sobic003G255200 Sobic006G136800--Sobic004G046200 Sobic002G081600 Sobic002G081600 Sobic006G136800--Sobic002G081600 Sobic003G436700 Sobic003G436700 Sobic006G136800--Sobic003G436700 Sobic001G295200 Sobic001G295200 Sobic006G136800--Sobic001G295200 Sobic001G036900 Sobic001G036900 Sobic006G136800--Sobic001G036900 Sobic004G205100 Sobic004G205100 Sobic006G136800--Sobic004G205100 Sobic004G340900 Sobic004G340900 Sobic006G136800--Sobic004G340900 Sobic001G389000 Sobic001G389000 Sobic006G136800--Sobic001G389000 Sobic006G136800--Sobic001G500000
Octagon: transcription factors


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