Gene annotation
Transcriptome id Sobic.004G042000.1,Sobic.004G042000.2,Sobic.004G042000.3
Synonym Sb04g003640
Functional annotation apoptosis-inducing factor 2, putative, expressed
UniProt A0A194YMR1 , C5XUP9
Pfam PF00070
Panther DB PTHR22912 PTHR22912:SF180
NCBI CDD KOG2495; NADH-dehydrogenase (ubiquinone)
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G44190 : FAD/NAD(P)-binding oxidoreductase family protein
RAP-DB (Rice) LOC_Os02g05680.2,LOC_Os02g05680.1 : apoptosis-inducing factor 2, putative, expressed
MaizeGDB (Corn) Zm00025a034883
Brachypodium KQJ93349
Barley -
Wheat TraesCS6A02G121300 , TraesCS6D02G111400 , TraesCS6B02G149600 , TraesCS6B02G149600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G197100 DNA binding protein, putative, expressed -
2 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.004G349125 - -
4 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
5 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
6 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
8 Sobic.001G304201 - -
9 Sobic.001G264000 dehydrogenase, putative, expressed K00001: E1.1.1.1, alcohol dehydrogenase
10 Sobic.010G001000 expressed protein -
11 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
13 Sobic.001G161500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
14 Sobic.003G079400 Ser/Thr protein kinase, putative, expressed -
15 Sobic.004G310200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@receptor-like protein kinase like protein, putative, expressed -
16 Sobic.007G090469 - -
17 Sobic.009G035300 expressed protein -
18 Sobic.003G016100 expressed protein -
19 Sobic.001G500000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G049900 UDP-rhamnose rhamnosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic004G042000 Sobic004G042000 Sobic006G197100 Sobic006G197100 Sobic004G042000--Sobic006G197100 Sobic002G003800 Sobic002G003800 Sobic004G042000--Sobic002G003800 Sobic004G349125 Sobic004G349125 Sobic004G042000--Sobic004G349125 Sobic001G416200 Sobic001G416200 Sobic004G042000--Sobic001G416200 Sobic002G213600 Sobic002G213600 Sobic004G042000--Sobic002G213600 Sobic001G302600 Sobic001G302600 Sobic004G042000--Sobic001G302600 Sobic003G311800 Sobic003G311800 Sobic004G042000--Sobic003G311800 Sobic001G304201 Sobic001G304201 Sobic004G042000--Sobic001G304201 Sobic001G264000 Sobic001G264000 Sobic004G042000--Sobic001G264000 Sobic006G197100--Sobic002G003800 Sobic006G197100--Sobic004G042000 Sobic006G197100--Sobic004G349125 Sobic006G197100--Sobic001G416200 Sobic004G202400 Sobic004G202400 Sobic006G197100--Sobic004G202400 Sobic006G197100--Sobic001G264000 Sobic006G197100--Sobic003G311800 Sobic002G042200 Sobic002G042200 Sobic006G197100--Sobic002G042200 Sobic003G368600 Sobic003G368600 Sobic006G197100--Sobic003G368600 Sobic002G003800--Sobic006G197100 Sobic002G003800--Sobic004G042000 Sobic002G003800--Sobic003G311800 Sobic002G003800--Sobic001G302600 Sobic001G049900 Sobic001G049900 Sobic002G003800--Sobic001G049900 Sobic002G003800--Sobic001G416200 Sobic004G310200 Sobic004G310200 Sobic002G003800--Sobic004G310200 Sobic003G079400 Sobic003G079400 Sobic002G003800--Sobic003G079400 Sobic001G304100 Sobic001G304100 Sobic002G003800--Sobic001G304100 Sobic004G349125--Sobic001G416200 Sobic004G349125--Sobic006G197100 Sobic004G349125--Sobic001G302600 Sobic001G161500 Sobic001G161500 Sobic004G349125--Sobic001G161500 Sobic004G349125--Sobic004G042000 Sobic003G228600 Sobic003G228600 Sobic004G349125--Sobic003G228600 Sobic004G349125--Sobic002G003800 Sobic004G349125--Sobic004G202400 Sobic004G349125--Sobic003G311800 Sobic001G416200--Sobic004G349125 Sobic001G416200--Sobic001G302600 Sobic001G416200--Sobic001G161500 Sobic001G416200--Sobic006G197100 Sobic001G416200--Sobic004G042000 Sobic004G318700 Sobic004G318700 Sobic001G416200--Sobic004G318700 Sobic001G416200--Sobic004G202400 Sobic001G416200--Sobic002G003800 Sobic001G416200--Sobic001G304100 Sobic002G213600--Sobic001G304100 Sobic002G213600--Sobic004G042000 Sobic003G016100 Sobic003G016100 Sobic002G213600--Sobic003G016100 Sobic003G319500 Sobic003G319500 Sobic002G213600--Sobic003G319500 Sobic003G053300 Sobic003G053300 Sobic002G213600--Sobic003G053300 Sobic002G213600--Sobic002G003800 Sobic002G213600--Sobic004G318700 Sobic010G063000 Sobic010G063000 Sobic002G213600--Sobic010G063000 Sobic002G213600--Sobic001G304201 Sobic001G302600--Sobic001G416200 Sobic001G302600--Sobic001G304100 Sobic001G302600--Sobic004G349125 Sobic001G302600--Sobic002G003800 Sobic001G302600--Sobic001G161500 Sobic001G302600--Sobic004G042000 Sobic001G302600--Sobic001G304201 Sobic004G292900 Sobic004G292900 Sobic001G302600--Sobic004G292900 Sobic001G302600--Sobic006G197100 Sobic004G297900 Sobic004G297900 Sobic003G311800--Sobic004G297900 Sobic003G311800--Sobic002G003800 Sobic003G311800--Sobic001G049900 Sobic009G109000 Sobic009G109000 Sobic003G311800--Sobic009G109000 Sobic003G311800--Sobic006G197100 Sobic006G274933 Sobic006G274933 Sobic003G311800--Sobic006G274933 Sobic002G183700 Sobic002G183700 Sobic003G311800--Sobic002G183700 Sobic007G090469 Sobic007G090469 Sobic003G311800--Sobic007G090469 Sobic003G311800--Sobic004G042000 Sobic001G304201--Sobic001G302600 Sobic001G304201--Sobic004G042000 Sobic001G304201--Sobic002G003800 Sobic001G304201--Sobic002G213600 Sobic002G326500 Sobic002G326500 Sobic001G304201--Sobic002G326500 Sobic003G399600 Sobic003G399600 Sobic001G304201--Sobic003G399600 Sobic001G304201--Sobic003G311800 Sobic009G035300 Sobic009G035300 Sobic001G304201--Sobic009G035300 Sobic001G304201--Sobic006G197100 Sobic001G264000--Sobic006G197100 Sobic004G348800 Sobic004G348800 Sobic001G264000--Sobic004G348800 Sobic001G264000--Sobic004G042000 Sobic002G185800 Sobic002G185800 Sobic001G264000--Sobic002G185800 Sobic001G264000--Sobic009G035300 Sobic006G256900 Sobic006G256900 Sobic001G264000--Sobic006G256900 Sobic004G249000 Sobic004G249000 Sobic001G264000--Sobic004G249000 Sobic003G269600 Sobic003G269600 Sobic001G264000--Sobic003G269600 Sobic001G264000--Sobic002G003800
Octagon: transcription factors


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