Gene annotation
Transcriptome id Sobic.002G213600.1
Synonym SbSAUR10, small auxin up RNA, Sb02g025620
Functional annotation "domain confirmed by Pfam database, expression not supported" (PubMedID : 20499123)
OsSAUR38 - Auxin-responsive SAUR gene family member, expressed
UniProt C5XDM7
Pfam PF02519
Panther DB PTHR31374 PTHR31374:SF22
NCBI CDD -
KEGG Orthology K14488; SAUR family protein
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT3G43120 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os09g26610.1 : OsSAUR38 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a041771 , Zm00025a013968 , Zm00025a047130
Brachypodium KQK17405 , KQJ90367
Barley HORVU5Hr1G062580.1 , HORVU5Hr1G062580.2
Wheat TraesCS5B02G212500 , TraesCS5A02G211300 , TraesCS5D02G222500 , TraesCS7D02G160000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
3 Sobic.003G016100 expressed protein -
4 Sobic.003G319500 receptor protein kinase, putative, expressed -
5 Sobic.003G053300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.004G318700 OsSub22 - Putative Subtilisin homologue, expressed -
8 Sobic.010G063000 - -
9 Sobic.001G304201 - -
10 Sobic.001G237900 expansin precursor, putative, expressed -
11 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
12 Sobic.003G417200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@esterase, putative, expressed -
13 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
14 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
15 Sobic.001G161500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
16 Sobic.009G032700 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.004G310200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@receptor-like protein kinase like protein, putative, expressed -
19 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
20 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic002G213600 Sobic002G213600 Sobic001G304100 Sobic001G304100 Sobic002G213600--Sobic001G304100 Sobic004G042000 Sobic004G042000 Sobic002G213600--Sobic004G042000 Sobic003G016100 Sobic003G016100 Sobic002G213600--Sobic003G016100 Sobic003G319500 Sobic003G319500 Sobic002G213600--Sobic003G319500 Sobic003G053300 Sobic003G053300 Sobic002G213600--Sobic003G053300 Sobic002G003800 Sobic002G003800 Sobic002G213600--Sobic002G003800 Sobic004G318700 Sobic004G318700 Sobic002G213600--Sobic004G318700 Sobic010G063000 Sobic010G063000 Sobic002G213600--Sobic010G063000 Sobic001G304201 Sobic001G304201 Sobic002G213600--Sobic001G304201 Sobic009G188000 Sobic009G188000 Sobic001G304100--Sobic009G188000 Sobic001G238400 Sobic001G238400 Sobic001G304100--Sobic001G238400 Sobic001G302600 Sobic001G302600 Sobic001G304100--Sobic001G302600 Sobic001G304100--Sobic002G213600 Sobic003G084400 Sobic003G084400 Sobic001G304100--Sobic003G084400 Sobic001G313600 Sobic001G313600 Sobic001G304100--Sobic001G313600 Sobic005G107900 Sobic005G107900 Sobic001G304100--Sobic005G107900 Sobic003G417200 Sobic003G417200 Sobic001G304100--Sobic003G417200 Sobic006G234800 Sobic006G234800 Sobic001G304100--Sobic006G234800 Sobic006G197100 Sobic006G197100 Sobic004G042000--Sobic006G197100 Sobic004G042000--Sobic002G003800 Sobic004G349125 Sobic004G349125 Sobic004G042000--Sobic004G349125 Sobic001G416200 Sobic001G416200 Sobic004G042000--Sobic001G416200 Sobic004G042000--Sobic002G213600 Sobic004G042000--Sobic001G302600 Sobic003G311800 Sobic003G311800 Sobic004G042000--Sobic003G311800 Sobic004G042000--Sobic001G304201 Sobic001G264000 Sobic001G264000 Sobic004G042000--Sobic001G264000 Sobic003G016100--Sobic002G213600 Sobic004G046200 Sobic004G046200 Sobic003G016100--Sobic004G046200 Sobic010G067400 Sobic010G067400 Sobic003G016100--Sobic010G067400 Sobic009G187200 Sobic009G187200 Sobic003G016100--Sobic009G187200 Sobic003G016100--Sobic004G042000 Sobic003G079400 Sobic003G079400 Sobic003G016100--Sobic003G079400 Sobic003G016100--Sobic003G084400 Sobic003G316000 Sobic003G316000 Sobic003G016100--Sobic003G316000 Sobic003G016100--Sobic004G318700 Sobic002G176100 Sobic002G176100 Sobic003G319500--Sobic002G176100 Sobic003G319500--Sobic003G417200 Sobic009G111000 Sobic009G111000 Sobic003G319500--Sobic009G111000 Sobic003G319500--Sobic002G213600 Sobic003G319500--Sobic001G304100 Sobic001G139100 Sobic001G139100 Sobic003G319500--Sobic001G139100 Sobic001G169500 Sobic001G169500 Sobic003G319500--Sobic001G169500 Sobic003G319500--Sobic005G107900 Sobic003G319500--Sobic003G084400 Sobic001G237900 Sobic001G237900 Sobic003G053300--Sobic001G237900 Sobic003G053300--Sobic002G213600 Sobic005G073000 Sobic005G073000 Sobic003G053300--Sobic005G073000 Sobic003G053300--Sobic001G304100 Sobic002G425000 Sobic002G425000 Sobic003G053300--Sobic002G425000 Sobic004G295100 Sobic004G295100 Sobic003G053300--Sobic004G295100 Sobic002G124500 Sobic002G124500 Sobic003G053300--Sobic002G124500 Sobic003G053300--Sobic001G238400 Sobic003G053400 Sobic003G053400 Sobic003G053300--Sobic003G053400 Sobic002G003800--Sobic006G197100 Sobic002G003800--Sobic004G042000 Sobic002G003800--Sobic003G311800 Sobic002G003800--Sobic001G302600 Sobic001G049900 Sobic001G049900 Sobic002G003800--Sobic001G049900 Sobic002G003800--Sobic001G416200 Sobic004G310200 Sobic004G310200 Sobic002G003800--Sobic004G310200 Sobic002G003800--Sobic003G079400 Sobic002G003800--Sobic001G304100 Sobic004G318700--Sobic001G416200 Sobic004G318700--Sobic001G238400 Sobic004G318700--Sobic001G304100 Sobic001G161500 Sobic001G161500 Sobic004G318700--Sobic001G161500 Sobic004G318700--Sobic002G213600 Sobic004G318700--Sobic009G188000 Sobic004G318700--Sobic001G237900 Sobic004G318700--Sobic004G349125 Sobic004G202400 Sobic004G202400 Sobic004G318700--Sobic004G202400 Sobic006G125100 Sobic006G125100 Sobic010G063000--Sobic006G125100 Sobic002G125700 Sobic002G125700 Sobic010G063000--Sobic002G125700 Sobic010G063000--Sobic002G213600 Sobic010G063000--Sobic001G237900 Sobic001G503100 Sobic001G503100 Sobic010G063000--Sobic001G503100 Sobic010G001000 Sobic010G001000 Sobic010G063000--Sobic010G001000 Sobic010G063000--Sobic001G161500 Sobic001G318500 Sobic001G318500 Sobic010G063000--Sobic001G318500 Sobic001G325400 Sobic001G325400 Sobic010G063000--Sobic001G325400 Sobic001G304201--Sobic001G302600 Sobic001G304201--Sobic004G042000 Sobic001G304201--Sobic002G003800 Sobic001G304201--Sobic002G213600 Sobic002G326500 Sobic002G326500 Sobic001G304201--Sobic002G326500 Sobic003G399600 Sobic003G399600 Sobic001G304201--Sobic003G399600 Sobic001G304201--Sobic003G311800 Sobic009G035300 Sobic009G035300 Sobic001G304201--Sobic009G035300 Sobic001G304201--Sobic006G197100
Octagon: transcription factors


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