Gene annotation
Transcriptome id Sobic.004G349125.1
Synonym -
Functional annotation -
UniProt C6JS93 , A0A1Z5RQD3 , A0A109NDA8
Pfam PF03479
Panther DB PTHR31100 PTHR31100:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G14465 : AT-hook motif nuclear-localized protein 20
RAP-DB (Rice) LOC_Os02g57520.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a047312 , Zm00025a030516 , Zm00025a014098 , Zm00025a022635 , Zm00025a032511 , Zm00025a034453 , Zm00025a050111 , Zm00025a021796 , Zm00025a001794 , Zm00025a019952
Brachypodium KQJ94680 , KQJ94681 , PNT69452 , KQK17622
Barley HORVU7Hr1G020390.1 , HORVU6Hr1G067700.1 , HORVU4Hr1G000870.3 , HORVU6Hr1G070090.3 , HORVU6Hr1G070090.4 , HORVU6Hr1G070090.5 , HORVU0Hr1G011700.1 , HORVU6Hr1G070090.1 , HORVU4Hr1G000870.6 , HORVU4Hr1G000870.5 , HORVU4Hr1G000870.2 , HORVU7Hr1G046930.1 , HORVU6Hr1G091740.4 , HORVU6Hr1G091740.1 , HORVU6Hr1G091740.3 , HORVU6Hr1G091740.2 , HORVU6Hr1G010470.1 , HORVU6Hr1G010470.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
2 Sobic.006G197100 DNA binding protein, putative, expressed -
3 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.001G161500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
5 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
6 Sobic.003G228600 cytochrome P450 72A1, putative, expressed -
7 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
9 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
10 Sobic.004G318700 OsSub22 - Putative Subtilisin homologue, expressed -
11 Sobic.007G169900 male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
12 Sobic.004G227800 CBS domain-containing protein, putative, expressed -
13 Sobic.009G106400 GCRP10 - Glycine and cysteine rich family protein precursor, expressed -
14 Sobic.009G035300 expressed protein -
15 Sobic.007G176000 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
16 Sobic.003G360600 cytochrome P450, putative, expressed K15401: long-chain fatty acid omega-monooxygenase
17 Sobic.001G264000 dehydrogenase, putative, expressed K00001: E1.1.1.1, alcohol dehydrogenase
18 Sobic.007G030501 - -
19 Sobic.003G368600 terpene synthase, putative, expressed -
20 Sobic.003G079400 Ser/Thr protein kinase, putative, expressed -


Gene co-expression network
sample Sobic004G349125 Sobic004G349125 Sobic001G416200 Sobic001G416200 Sobic004G349125--Sobic001G416200 Sobic006G197100 Sobic006G197100 Sobic004G349125--Sobic006G197100 Sobic001G302600 Sobic001G302600 Sobic004G349125--Sobic001G302600 Sobic001G161500 Sobic001G161500 Sobic004G349125--Sobic001G161500 Sobic004G042000 Sobic004G042000 Sobic004G349125--Sobic004G042000 Sobic003G228600 Sobic003G228600 Sobic004G349125--Sobic003G228600 Sobic002G003800 Sobic002G003800 Sobic004G349125--Sobic002G003800 Sobic004G202400 Sobic004G202400 Sobic004G349125--Sobic004G202400 Sobic003G311800 Sobic003G311800 Sobic004G349125--Sobic003G311800 Sobic001G416200--Sobic004G349125 Sobic001G416200--Sobic001G302600 Sobic001G416200--Sobic001G161500 Sobic001G416200--Sobic006G197100 Sobic001G416200--Sobic004G042000 Sobic004G318700 Sobic004G318700 Sobic001G416200--Sobic004G318700 Sobic001G416200--Sobic004G202400 Sobic001G416200--Sobic002G003800 Sobic001G304100 Sobic001G304100 Sobic001G416200--Sobic001G304100 Sobic006G197100--Sobic002G003800 Sobic006G197100--Sobic004G042000 Sobic006G197100--Sobic004G349125 Sobic006G197100--Sobic001G416200 Sobic006G197100--Sobic004G202400 Sobic001G264000 Sobic001G264000 Sobic006G197100--Sobic001G264000 Sobic006G197100--Sobic003G311800 Sobic002G042200 Sobic002G042200 Sobic006G197100--Sobic002G042200 Sobic003G368600 Sobic003G368600 Sobic006G197100--Sobic003G368600 Sobic001G302600--Sobic001G416200 Sobic001G302600--Sobic001G304100 Sobic001G302600--Sobic004G349125 Sobic001G302600--Sobic002G003800 Sobic001G302600--Sobic001G161500 Sobic001G302600--Sobic004G042000 Sobic001G304201 Sobic001G304201 Sobic001G302600--Sobic001G304201 Sobic004G292900 Sobic004G292900 Sobic001G302600--Sobic004G292900 Sobic001G302600--Sobic006G197100 Sobic001G161500--Sobic001G416200 Sobic001G161500--Sobic004G349125 Sobic001G161500--Sobic001G302600 Sobic001G161500--Sobic004G318700 Sobic001G161500--Sobic001G304100 Sobic001G161500--Sobic004G042000 Sobic009G035300 Sobic009G035300 Sobic001G161500--Sobic009G035300 Sobic002G213600 Sobic002G213600 Sobic001G161500--Sobic002G213600 Sobic001G161500--Sobic006G197100 Sobic004G042000--Sobic006G197100 Sobic004G042000--Sobic002G003800 Sobic004G042000--Sobic004G349125 Sobic004G042000--Sobic001G416200 Sobic004G042000--Sobic002G213600 Sobic004G042000--Sobic001G302600 Sobic004G042000--Sobic003G311800 Sobic004G042000--Sobic001G304201 Sobic004G042000--Sobic001G264000 Sobic003G228600--Sobic004G349125 Sobic005G156500 Sobic005G156500 Sobic003G228600--Sobic005G156500 Sobic004G038700 Sobic004G038700 Sobic003G228600--Sobic004G038700 Sobic003G228600--Sobic006G197100 Sobic003G228600--Sobic001G416200 Sobic008G011700 Sobic008G011700 Sobic003G228600--Sobic008G011700 Sobic003G228600--Sobic001G264000 Sobic001G067100 Sobic001G067100 Sobic003G228600--Sobic001G067100 Sobic006G274933 Sobic006G274933 Sobic003G228600--Sobic006G274933 Sobic002G003800--Sobic006G197100 Sobic002G003800--Sobic004G042000 Sobic002G003800--Sobic003G311800 Sobic002G003800--Sobic001G302600 Sobic001G049900 Sobic001G049900 Sobic002G003800--Sobic001G049900 Sobic002G003800--Sobic001G416200 Sobic004G310200 Sobic004G310200 Sobic002G003800--Sobic004G310200 Sobic003G079400 Sobic003G079400 Sobic002G003800--Sobic003G079400 Sobic002G003800--Sobic001G304100 Sobic004G202400--Sobic006G197100 Sobic004G202400--Sobic001G416200 Sobic001G237900 Sobic001G237900 Sobic004G202400--Sobic001G237900 SobicK026900 SobicK026900 Sobic004G202400--SobicK026900 Sobic003G157600 Sobic003G157600 Sobic004G202400--Sobic003G157600 Sobic004G202400--Sobic004G349125 Sobic004G202400--Sobic004G042000 Sobic004G202400--Sobic002G042200 Sobic004G202400--Sobic003G311800 Sobic004G297900 Sobic004G297900 Sobic003G311800--Sobic004G297900 Sobic003G311800--Sobic002G003800 Sobic003G311800--Sobic001G049900 Sobic009G109000 Sobic009G109000 Sobic003G311800--Sobic009G109000 Sobic003G311800--Sobic006G197100 Sobic003G311800--Sobic006G274933 Sobic002G183700 Sobic002G183700 Sobic003G311800--Sobic002G183700 Sobic007G090469 Sobic007G090469 Sobic003G311800--Sobic007G090469 Sobic003G311800--Sobic004G042000
Octagon: transcription factors


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