Gene annotation
Transcriptome id Sobic.004G227800.1
Synonym Sb04g027220
Functional annotation CBS domain-containing protein, putative, expressed
UniProt C5XY98
Pfam PF00571
Panther DB PTHR13780 PTHR13780:SF56
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G53750 : CBS domain-containing protein
RAP-DB (Rice) LOC_Os02g42640.1 : CBS domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a020999
Brachypodium KQK00496
Barley -
Wheat TraesCS6B02G264200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G349125 - -
2 Sobic.003G404600 regulatory protein, putative, expressed -
3 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
4 Sobic.001G161500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
5 Sobic.006G197100 DNA binding protein, putative, expressed -
6 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
8 Sobic.003G228600 cytochrome P450 72A1, putative, expressed -
9 Sobic.006G125100 ubiquitin family protein, putative, expressed -
10 Sobic.010G001000 expressed protein -
11 Sobic.003G368600 terpene synthase, putative, expressed -
12 Sobic.001G304201 - -
13 Sobic.006G157900 C2 domain containing protein, putative, expressed -
14 Sobic.006G256900 dirigent-like protein pDIR17, putative, expressed -
15 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
16 Sobic.005G156500 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed K08237: hydroquinone glucosyltransferase
17 Sobic.001G147900 cytochrome P450, putative, expressed -
18 Sobic.001G063200 VQ domain containing protein, putative, expressed -
19 Sobic.010G185000 VQ domain containing protein, putative, expressed -
20 Sobic.006G059700 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase


Gene co-expression network
sample Sobic004G227800 Sobic004G227800 Sobic004G349125 Sobic004G349125 Sobic004G227800--Sobic004G349125 Sobic003G404600 Sobic003G404600 Sobic004G227800--Sobic003G404600 Sobic004G042000 Sobic004G042000 Sobic004G227800--Sobic004G042000 Sobic001G161500 Sobic001G161500 Sobic004G227800--Sobic001G161500 Sobic006G197100 Sobic006G197100 Sobic004G227800--Sobic006G197100 Sobic001G302600 Sobic001G302600 Sobic004G227800--Sobic001G302600 Sobic001G416200 Sobic001G416200 Sobic004G227800--Sobic001G416200 Sobic003G228600 Sobic003G228600 Sobic004G227800--Sobic003G228600 Sobic006G125100 Sobic006G125100 Sobic004G227800--Sobic006G125100 Sobic004G349125--Sobic001G416200 Sobic004G349125--Sobic006G197100 Sobic004G349125--Sobic001G302600 Sobic004G349125--Sobic001G161500 Sobic004G349125--Sobic004G042000 Sobic004G349125--Sobic003G228600 Sobic002G003800 Sobic002G003800 Sobic004G349125--Sobic002G003800 Sobic004G202400 Sobic004G202400 Sobic004G349125--Sobic004G202400 Sobic003G311800 Sobic003G311800 Sobic004G349125--Sobic003G311800 Sobic006G059700 Sobic006G059700 Sobic003G404600--Sobic006G059700 Sobic003G366600 Sobic003G366600 Sobic003G404600--Sobic003G366600 Sobic001G147900 Sobic001G147900 Sobic003G404600--Sobic001G147900 Sobic010G185000 Sobic010G185000 Sobic003G404600--Sobic010G185000 Sobic003G404600--Sobic006G197100 Sobic003G404600--Sobic004G227800 Sobic004G024100 Sobic004G024100 Sobic003G404600--Sobic004G024100 Sobic004G348400 Sobic004G348400 Sobic003G404600--Sobic004G348400 Sobic003G404600--Sobic004G349125 Sobic004G042000--Sobic006G197100 Sobic004G042000--Sobic002G003800 Sobic004G042000--Sobic004G349125 Sobic004G042000--Sobic001G416200 Sobic002G213600 Sobic002G213600 Sobic004G042000--Sobic002G213600 Sobic004G042000--Sobic001G302600 Sobic004G042000--Sobic003G311800 Sobic001G304201 Sobic001G304201 Sobic004G042000--Sobic001G304201 Sobic001G264000 Sobic001G264000 Sobic004G042000--Sobic001G264000 Sobic001G161500--Sobic001G416200 Sobic001G161500--Sobic004G349125 Sobic001G161500--Sobic001G302600 Sobic004G318700 Sobic004G318700 Sobic001G161500--Sobic004G318700 Sobic001G304100 Sobic001G304100 Sobic001G161500--Sobic001G304100 Sobic001G161500--Sobic004G042000 Sobic009G035300 Sobic009G035300 Sobic001G161500--Sobic009G035300 Sobic001G161500--Sobic002G213600 Sobic001G161500--Sobic006G197100 Sobic006G197100--Sobic002G003800 Sobic006G197100--Sobic004G042000 Sobic006G197100--Sobic004G349125 Sobic006G197100--Sobic001G416200 Sobic006G197100--Sobic004G202400 Sobic006G197100--Sobic001G264000 Sobic006G197100--Sobic003G311800 Sobic002G042200 Sobic002G042200 Sobic006G197100--Sobic002G042200 Sobic003G368600 Sobic003G368600 Sobic006G197100--Sobic003G368600 Sobic001G302600--Sobic001G416200 Sobic001G302600--Sobic001G304100 Sobic001G302600--Sobic004G349125 Sobic001G302600--Sobic002G003800 Sobic001G302600--Sobic001G161500 Sobic001G302600--Sobic004G042000 Sobic001G302600--Sobic001G304201 Sobic004G292900 Sobic004G292900 Sobic001G302600--Sobic004G292900 Sobic001G302600--Sobic006G197100 Sobic001G416200--Sobic004G349125 Sobic001G416200--Sobic001G302600 Sobic001G416200--Sobic001G161500 Sobic001G416200--Sobic006G197100 Sobic001G416200--Sobic004G042000 Sobic001G416200--Sobic004G318700 Sobic001G416200--Sobic004G202400 Sobic001G416200--Sobic002G003800 Sobic001G416200--Sobic001G304100 Sobic003G228600--Sobic004G349125 Sobic005G156500 Sobic005G156500 Sobic003G228600--Sobic005G156500 Sobic004G038700 Sobic004G038700 Sobic003G228600--Sobic004G038700 Sobic003G228600--Sobic006G197100 Sobic003G228600--Sobic001G416200 Sobic008G011700 Sobic008G011700 Sobic003G228600--Sobic008G011700 Sobic003G228600--Sobic001G264000 Sobic001G067100 Sobic001G067100 Sobic003G228600--Sobic001G067100 Sobic006G274933 Sobic006G274933 Sobic003G228600--Sobic006G274933 Sobic001G503100 Sobic001G503100 Sobic006G125100--Sobic001G503100 Sobic010G063000 Sobic010G063000 Sobic006G125100--Sobic010G063000 Sobic002G247600 Sobic002G247600 Sobic006G125100--Sobic002G247600 Sobic002G125700 Sobic002G125700 Sobic006G125100--Sobic002G125700 Sobic006G125100--Sobic010G185000 Sobic006G125100--Sobic004G348400 Sobic001G333400 Sobic001G333400 Sobic006G125100--Sobic001G333400 Sobic003G255500 Sobic003G255500 Sobic006G125100--Sobic003G255500 Sobic006G277600 Sobic006G277600 Sobic006G125100--Sobic006G277600
Octagon: transcription factors


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