Gene annotation
Transcriptome id Sobic.001G063200.1
Synonym Sb01g005740
Functional annotation VQ domain containing protein, putative, expressed
UniProt C5WY48
Pfam PF05678
Panther DB PTHR33143 PTHR33143:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G68450 : VQ motif-containing protein
RAP-DB (Rice) LOC_Os03g57520.1 : VQ domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a045064 , Zm00025a016608
Brachypodium KQK12832
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
2 Sobic.001G161500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
3 Sobic.004G349125 - -
4 Sobic.010G063000 - -
5 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
6 Sobic.009G035300 expressed protein -
7 Sobic.003G079400 Ser/Thr protein kinase, putative, expressed -
8 Sobic.001G264000 dehydrogenase, putative, expressed K00001: E1.1.1.1, alcohol dehydrogenase
9 Sobic.006G125100 ubiquitin family protein, putative, expressed -
10 Sobic.006G197100 DNA binding protein, putative, expressed -
11 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
12 Sobic.004G227800 CBS domain-containing protein, putative, expressed -
13 Sobic.003G255500 expressed protein -
14 Sobic.003G363900 glycosyl hydrolase, putative, expressed K01183: chitinase
15 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.004G318700 OsSub22 - Putative Subtilisin homologue, expressed -
17 Sobic.003G184100 auxin-induced protein 5NG4, putative, expressed -
18 Sobic.003G016100 expressed protein -
19 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
20 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G063200 Sobic001G063200 Sobic001G416200 Sobic001G416200 Sobic001G063200--Sobic001G416200 Sobic001G161500 Sobic001G161500 Sobic001G063200--Sobic001G161500 Sobic004G349125 Sobic004G349125 Sobic001G063200--Sobic004G349125 Sobic010G063000 Sobic010G063000 Sobic001G063200--Sobic010G063000 Sobic004G042000 Sobic004G042000 Sobic001G063200--Sobic004G042000 Sobic009G035300 Sobic009G035300 Sobic001G063200--Sobic009G035300 Sobic003G079400 Sobic003G079400 Sobic001G063200--Sobic003G079400 Sobic001G264000 Sobic001G264000 Sobic001G063200--Sobic001G264000 Sobic006G125100 Sobic006G125100 Sobic001G063200--Sobic006G125100 Sobic001G416200--Sobic004G349125 Sobic001G302600 Sobic001G302600 Sobic001G416200--Sobic001G302600 Sobic001G416200--Sobic001G161500 Sobic006G197100 Sobic006G197100 Sobic001G416200--Sobic006G197100 Sobic001G416200--Sobic004G042000 Sobic004G318700 Sobic004G318700 Sobic001G416200--Sobic004G318700 Sobic004G202400 Sobic004G202400 Sobic001G416200--Sobic004G202400 Sobic002G003800 Sobic002G003800 Sobic001G416200--Sobic002G003800 Sobic001G304100 Sobic001G304100 Sobic001G416200--Sobic001G304100 Sobic001G161500--Sobic001G416200 Sobic001G161500--Sobic004G349125 Sobic001G161500--Sobic001G302600 Sobic001G161500--Sobic004G318700 Sobic001G161500--Sobic001G304100 Sobic001G161500--Sobic004G042000 Sobic001G161500--Sobic009G035300 Sobic002G213600 Sobic002G213600 Sobic001G161500--Sobic002G213600 Sobic001G161500--Sobic006G197100 Sobic004G349125--Sobic001G416200 Sobic004G349125--Sobic006G197100 Sobic004G349125--Sobic001G302600 Sobic004G349125--Sobic001G161500 Sobic004G349125--Sobic004G042000 Sobic003G228600 Sobic003G228600 Sobic004G349125--Sobic003G228600 Sobic004G349125--Sobic002G003800 Sobic004G349125--Sobic004G202400 Sobic003G311800 Sobic003G311800 Sobic004G349125--Sobic003G311800 Sobic010G063000--Sobic006G125100 Sobic002G125700 Sobic002G125700 Sobic010G063000--Sobic002G125700 Sobic010G063000--Sobic002G213600 Sobic001G237900 Sobic001G237900 Sobic010G063000--Sobic001G237900 Sobic001G503100 Sobic001G503100 Sobic010G063000--Sobic001G503100 Sobic010G001000 Sobic010G001000 Sobic010G063000--Sobic010G001000 Sobic010G063000--Sobic001G161500 Sobic001G318500 Sobic001G318500 Sobic010G063000--Sobic001G318500 Sobic001G325400 Sobic001G325400 Sobic010G063000--Sobic001G325400 Sobic004G042000--Sobic006G197100 Sobic004G042000--Sobic002G003800 Sobic004G042000--Sobic004G349125 Sobic004G042000--Sobic001G416200 Sobic004G042000--Sobic002G213600 Sobic004G042000--Sobic001G302600 Sobic004G042000--Sobic003G311800 Sobic001G304201 Sobic001G304201 Sobic004G042000--Sobic001G304201 Sobic004G042000--Sobic001G264000 Sobic009G035300--Sobic001G264000 Sobic009G035300--Sobic004G042000 Sobic009G035300--Sobic001G416200 Sobic009G035300--Sobic001G161500 Sobic009G035300--Sobic004G349125 Sobic009G035300--Sobic001G302600 Sobic009G035300--Sobic006G197100 Sobic009G035300--Sobic001G304201 Sobic009G035300--Sobic002G003800 Sobic004G046200 Sobic004G046200 Sobic003G079400--Sobic004G046200 Sobic001G082600 Sobic001G082600 Sobic003G079400--Sobic001G082600 Sobic003G079400--Sobic006G197100 Sobic003G079400--Sobic002G003800 Sobic003G079400--Sobic004G042000 Sobic008G106700 Sobic008G106700 Sobic003G079400--Sobic008G106700 Sobic003G016100 Sobic003G016100 Sobic003G079400--Sobic003G016100 Sobic003G079400--Sobic004G349125 Sobic009G187200 Sobic009G187200 Sobic003G079400--Sobic009G187200 Sobic001G264000--Sobic006G197100 Sobic004G348800 Sobic004G348800 Sobic001G264000--Sobic004G348800 Sobic001G264000--Sobic004G042000 Sobic002G185800 Sobic002G185800 Sobic001G264000--Sobic002G185800 Sobic001G264000--Sobic009G035300 Sobic006G256900 Sobic006G256900 Sobic001G264000--Sobic006G256900 Sobic004G249000 Sobic004G249000 Sobic001G264000--Sobic004G249000 Sobic003G269600 Sobic003G269600 Sobic001G264000--Sobic003G269600 Sobic001G264000--Sobic002G003800 Sobic006G125100--Sobic001G503100 Sobic006G125100--Sobic010G063000 Sobic002G247600 Sobic002G247600 Sobic006G125100--Sobic002G247600 Sobic006G125100--Sobic002G125700 Sobic010G185000 Sobic010G185000 Sobic006G125100--Sobic010G185000 Sobic004G348400 Sobic004G348400 Sobic006G125100--Sobic004G348400 Sobic001G333400 Sobic001G333400 Sobic006G125100--Sobic001G333400 Sobic003G255500 Sobic003G255500 Sobic006G125100--Sobic003G255500 Sobic006G277600 Sobic006G277600 Sobic006G125100--Sobic006G277600
Octagon: transcription factors


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