Gene annotation
Transcriptome id Sobic.003G363900.1
Synonym CHIA, ATCHIA, Sb03g040560
Functional annotation glycosyl hydrolase, putative, expressed
UniProt C5XQI8
Pfam PF00704
Panther DB PTHR11177
NCBI CDD -
KEGG Orthology K01183; chitinase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G24090 : chitinase A
RAP-DB (Rice) LOC_Os01g64100.1 : glycosyl hydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a026760 , Zm00025a026759
Brachypodium PNT72617 , KQK10704 , KQK10703 , KQK10702 , PNT72403
Barley HORVU3Hr1G084230.2 , HORVU3Hr1G084230.1 , HORVU3Hr1G084220.1 , HORVU3Hr1G084280.1 , HORVU3Hr1G084290.1 , HORVU3Hr1G087870.1 , HORVU0Hr1G006270.1 , HORVU3Hr1G084250.1 , HORVU3Hr1G084220.3 , HORVU3Hr1G084220.2 , HORVU3Hr1G083670.2
Wheat TraesCS3B02G408600 , TraesCS3A02G373600 , TraesCS3B02G294900 , TraesCS3B02G405900 , TraesCS3A02G261700 , TraesCS3D02G366400 , TraesCS3D02G261700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G016100 expressed protein -
2 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
3 Sobic.008G172600 ATCHX, putative, expressed -
4 Sobic.004G318700 OsSub22 - Putative Subtilisin homologue, expressed -
5 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
6 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
7 Sobic.001G237900 expansin precursor, putative, expressed -
8 Sobic.002G327300 expressed protein -
9 Sobic.009G187200 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
10 Sobic.001G128500 LTPL73 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.003G255200 expressed protein -
12 Sobic.010G158500 Zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
14 Sobic.001G063200 VQ domain containing protein, putative, expressed -
15 Sobic.003G053300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.006G158400 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
17 Sobic.008G144600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
18 Sobic.003G264600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.010G063000 - -
20 Sobic.004G046200 sulfotransferase domain containing protein, expressed -


Gene co-expression network
sample Sobic003G363900 Sobic003G363900 Sobic003G016100 Sobic003G016100 Sobic003G363900--Sobic003G016100 Sobic002G213600 Sobic002G213600 Sobic003G363900--Sobic002G213600 Sobic008G172600 Sobic008G172600 Sobic003G363900--Sobic008G172600 Sobic004G318700 Sobic004G318700 Sobic003G363900--Sobic004G318700 Sobic004G202400 Sobic004G202400 Sobic003G363900--Sobic004G202400 Sobic004G042000 Sobic004G042000 Sobic003G363900--Sobic004G042000 Sobic001G237900 Sobic001G237900 Sobic003G363900--Sobic001G237900 Sobic002G327300 Sobic002G327300 Sobic003G363900--Sobic002G327300 Sobic009G187200 Sobic009G187200 Sobic003G363900--Sobic009G187200 Sobic003G016100--Sobic002G213600 Sobic004G046200 Sobic004G046200 Sobic003G016100--Sobic004G046200 Sobic010G067400 Sobic010G067400 Sobic003G016100--Sobic010G067400 Sobic003G016100--Sobic009G187200 Sobic003G016100--Sobic004G042000 Sobic003G079400 Sobic003G079400 Sobic003G016100--Sobic003G079400 Sobic003G084400 Sobic003G084400 Sobic003G016100--Sobic003G084400 Sobic003G316000 Sobic003G316000 Sobic003G016100--Sobic003G316000 Sobic003G016100--Sobic004G318700 Sobic001G304100 Sobic001G304100 Sobic002G213600--Sobic001G304100 Sobic002G213600--Sobic004G042000 Sobic002G213600--Sobic003G016100 Sobic003G319500 Sobic003G319500 Sobic002G213600--Sobic003G319500 Sobic003G053300 Sobic003G053300 Sobic002G213600--Sobic003G053300 Sobic002G003800 Sobic002G003800 Sobic002G213600--Sobic002G003800 Sobic002G213600--Sobic004G318700 Sobic010G063000 Sobic010G063000 Sobic002G213600--Sobic010G063000 Sobic001G304201 Sobic001G304201 Sobic002G213600--Sobic001G304201 Sobic008G172600--Sobic009G187200 Sobic003G255200 Sobic003G255200 Sobic008G172600--Sobic003G255200 Sobic002G004900 Sobic002G004900 Sobic008G172600--Sobic002G004900 Sobic008G172600--Sobic004G046200 Sobic006G044100 Sobic006G044100 Sobic008G172600--Sobic006G044100 Sobic003G280200 Sobic003G280200 Sobic008G172600--Sobic003G280200 Sobic001G325400 Sobic001G325400 Sobic008G172600--Sobic001G325400 Sobic001G503100 Sobic001G503100 Sobic008G172600--Sobic001G503100 Sobic002G125700 Sobic002G125700 Sobic008G172600--Sobic002G125700 Sobic001G416200 Sobic001G416200 Sobic004G318700--Sobic001G416200 Sobic001G238400 Sobic001G238400 Sobic004G318700--Sobic001G238400 Sobic004G318700--Sobic001G304100 Sobic001G161500 Sobic001G161500 Sobic004G318700--Sobic001G161500 Sobic004G318700--Sobic002G213600 Sobic009G188000 Sobic009G188000 Sobic004G318700--Sobic009G188000 Sobic004G318700--Sobic001G237900 Sobic004G349125 Sobic004G349125 Sobic004G318700--Sobic004G349125 Sobic004G318700--Sobic004G202400 Sobic006G197100 Sobic006G197100 Sobic004G202400--Sobic006G197100 Sobic004G202400--Sobic001G416200 Sobic004G202400--Sobic001G237900 SobicK026900 SobicK026900 Sobic004G202400--SobicK026900 Sobic003G157600 Sobic003G157600 Sobic004G202400--Sobic003G157600 Sobic004G202400--Sobic004G349125 Sobic004G202400--Sobic004G042000 Sobic002G042200 Sobic002G042200 Sobic004G202400--Sobic002G042200 Sobic003G311800 Sobic003G311800 Sobic004G202400--Sobic003G311800 Sobic004G042000--Sobic006G197100 Sobic004G042000--Sobic002G003800 Sobic004G042000--Sobic004G349125 Sobic004G042000--Sobic001G416200 Sobic004G042000--Sobic002G213600 Sobic001G302600 Sobic001G302600 Sobic004G042000--Sobic001G302600 Sobic004G042000--Sobic003G311800 Sobic004G042000--Sobic001G304201 Sobic001G264000 Sobic001G264000 Sobic004G042000--Sobic001G264000 Sobic001G237900--Sobic001G238400 Sobic010G158500 Sobic010G158500 Sobic001G237900--Sobic010G158500 Sobic001G237900--Sobic003G053300 Sobic006G158400 Sobic006G158400 Sobic001G237900--Sobic006G158400 Sobic002G425000 Sobic002G425000 Sobic001G237900--Sobic002G425000 Sobic001G237900--Sobic004G202400 Sobic001G237900--Sobic001G304100 Sobic001G237900--Sobic010G063000 Sobic001G237900--Sobic002G213600 Sobic010G008400 Sobic010G008400 Sobic002G327300--Sobic010G008400 Sobic003G264600 Sobic003G264600 Sobic002G327300--Sobic003G264600 Sobic002G327300--Sobic004G046200 Sobic002G327300--Sobic003G084400 Sobic003G228200 Sobic003G228200 Sobic002G327300--Sobic003G228200 Sobic002G327300--Sobic003G319500 Sobic002G327100 Sobic002G327100 Sobic002G327300--Sobic002G327100 Sobic001G500000 Sobic001G500000 Sobic002G327300--Sobic001G500000 Sobic002G017800 Sobic002G017800 Sobic002G327300--Sobic002G017800 Sobic009G187200--Sobic008G172600 Sobic009G187200--Sobic004G046200 Sobic009G187200--Sobic006G044100 Sobic001G128500 Sobic001G128500 Sobic009G187200--Sobic001G128500 Sobic009G187200--Sobic010G067400 Sobic009G187200--Sobic003G016100 Sobic009G187200--Sobic003G255200 Sobic009G187200--Sobic001G503100 Sobic003G255500 Sobic003G255500 Sobic009G187200--Sobic003G255500
Octagon: transcription factors


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