Gene annotation
Transcriptome id Sobic.003G404600.1
Synonym Sb03g044020
Functional annotation regulatory protein, putative, expressed
UniProt C5XGA5
Pfam PF03407
Panther DB PTHR24015 PTHR24015:SF759
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14590 : Nucleotide-diphospho-sugar transferase family protein
RAP-DB (Rice) LOC_Os01g69140.1 : regulatory protein, putative, expressed
MaizeGDB (Corn) Zm00025a039293 , Zm00025a039294 , Zm00025a039296 , Zm00025a009026 , Zm00025a026259 , Zm00025a000409
Brachypodium KQK12124 , KQK11244 , KQK11243 , KQK11254 , PNT73794 , PNT73795
Barley HORVU4Hr1G082520.3 , HORVU4Hr1G082520.2 , HORVU5Hr1G121600.3 , HORVU5Hr1G121600.2 , HORVU5Hr1G121600.1 , HORVU5Hr1G121600.6 , HORVU5Hr1G121600.5 , HORVU5Hr1G121600.4 , HORVU5Hr1G121440.9 , HORVU5Hr1G121440.8 , HORVU5Hr1G121440.5 , HORVU5Hr1G121440.4 , HORVU5Hr1G121440.7 , HORVU5Hr1G121440.6 , HORVU5Hr1G121440.3 , HORVU5Hr1G121440.2 , HORVU1Hr1G092200.4 , HORVU1Hr1G092200.3 , HORVU4Hr1G082520.5 , HORVU4Hr1G082520.4 , HORVU4Hr1G082520.1 , HORVU3Hr1G094140.1 , HORVU3Hr1G094140.2 , HORVU3Hr1G094380.1 , HORVU5Hr1G121450.1 , HORVU1Hr1G092200.1 , HORVU3Hr1G094340.3 , HORVU3Hr1G094340.2 , HORVU3Hr1G094340.1 , HORVU1Hr1G092200.5 , HORVU1Hr1G092200.2 , HORVU3Hr1G094250.8 , HORVU3Hr1G094340.4 , HORVU3Hr1G094250.5 , HORVU3Hr1G094250.4 , HORVU3Hr1G094250.7 , HORVU3Hr1G094250.6 , HORVU3Hr1G094250.1 , HORVU3Hr1G094250.3 , HORVU3Hr1G094250.2 , HORVU3Hr1G094320.5 , HORVU3Hr1G094320.4 , HORVU3Hr1G094320.7 , HORVU3Hr1G094320.6 , HORVU3Hr1G094320.1 , HORVU3Hr1G094320.3 , HORVU3Hr1G094320.2
Wheat TraesCS3D02G422900 , TraesCS3D02G422900 , TraesCS4A02G339800 , TraesCS3D02G424000 , TraesCS3B02G466300 , TraesCS3B02G465700 , TraesCS4D02G320100 , TraesCS3D02G424300 , TraesCS1D02G328100 , TraesCS3A02G428700 , TraesCS5D02G536200 , TraesCS3A02G428300 , TraesCS5D02G536400 , TraesCS5D02G536400 , TraesCS3B02G465400 , TraesCS3A02G428200 , TraesCS5A02G495700 , TraesCS5B02G549400 , TraesCS3D02G424000 , TraesCS3B02G465900 , TraesCS5B02G549300 , TraesCS3D02G423600 , TraesCS3A02G427400 , TraesCS4B02G323100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G059700 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
2 Sobic.003G366600 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
3 Sobic.001G147900 cytochrome P450, putative, expressed -
4 Sobic.010G185000 VQ domain containing protein, putative, expressed -
5 Sobic.006G197100 DNA binding protein, putative, expressed -
6 Sobic.004G227800 CBS domain-containing protein, putative, expressed -
7 Sobic.004G024100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
8 Sobic.004G348400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
9 Sobic.004G349125 - -
10 Sobic.010G001000 expressed protein -
11 Sobic.003G368600 terpene synthase, putative, expressed -
12 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
13 Sobic.006G157900 C2 domain containing protein, putative, expressed -
14 Sobic.006G256900 dirigent-like protein pDIR17, putative, expressed -
15 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.003G184100 auxin-induced protein 5NG4, putative, expressed -
17 Sobic.010G252500 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSAUR28 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
18 Sobic.006G125100 ubiquitin family protein, putative, expressed -
19 Sobic.009G072900 calmodulin-binding protein, putative, expressed -
20 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic003G404600 Sobic003G404600 Sobic006G059700 Sobic006G059700 Sobic003G404600--Sobic006G059700 Sobic003G366600 Sobic003G366600 Sobic003G404600--Sobic003G366600 Sobic001G147900 Sobic001G147900 Sobic003G404600--Sobic001G147900 Sobic010G185000 Sobic010G185000 Sobic003G404600--Sobic010G185000 Sobic006G197100 Sobic006G197100 Sobic003G404600--Sobic006G197100 Sobic004G227800 Sobic004G227800 Sobic003G404600--Sobic004G227800 Sobic004G024100 Sobic004G024100 Sobic003G404600--Sobic004G024100 Sobic004G348400 Sobic004G348400 Sobic003G404600--Sobic004G348400 Sobic004G349125 Sobic004G349125 Sobic003G404600--Sobic004G349125 Sobic006G059700--Sobic003G404600 Sobic004G262200 Sobic004G262200 Sobic006G059700--Sobic004G262200 Sobic003G280400 Sobic003G280400 Sobic006G059700--Sobic003G280400 Sobic010G272300 Sobic010G272300 Sobic006G059700--Sobic010G272300 Sobic010G001000 Sobic010G001000 Sobic006G059700--Sobic010G001000 Sobic006G059700--Sobic003G366600 Sobic006G059700--Sobic001G147900 Sobic006G125100 Sobic006G125100 Sobic006G059700--Sobic006G125100 Sobic002G312900 Sobic002G312900 Sobic006G059700--Sobic002G312900 Sobic003G366600--Sobic004G348400 Sobic006G044100 Sobic006G044100 Sobic003G366600--Sobic006G044100 Sobic006G157900 Sobic006G157900 Sobic003G366600--Sobic006G157900 Sobic003G366600--Sobic010G185000 Sobic003G366600--Sobic003G404600 Sobic001G481400 Sobic001G481400 Sobic003G366600--Sobic001G481400 Sobic001G403000 Sobic001G403000 Sobic003G366600--Sobic001G403000 Sobic009G072900 Sobic009G072900 Sobic003G366600--Sobic009G072900 Sobic003G366600--Sobic006G059700 Sobic003G368600 Sobic003G368600 Sobic001G147900--Sobic003G368600 Sobic001G147900--Sobic006G197100 Sobic001G147900--Sobic003G404600 Sobic006G243600 Sobic006G243600 Sobic001G147900--Sobic006G243600 Sobic002G003800 Sobic002G003800 Sobic001G147900--Sobic002G003800 Sobic003G152200 Sobic003G152200 Sobic001G147900--Sobic003G152200 Sobic006G256900 Sobic006G256900 Sobic001G147900--Sobic006G256900 Sobic001G147900--Sobic004G348400 Sobic001G147900--Sobic006G059700 Sobic002G247600 Sobic002G247600 Sobic010G185000--Sobic002G247600 Sobic005G018700 Sobic005G018700 Sobic010G185000--Sobic005G018700 Sobic007G227300 Sobic007G227300 Sobic010G185000--Sobic007G227300 Sobic009G240600 Sobic009G240600 Sobic010G185000--Sobic009G240600 Sobic010G185000--Sobic004G348400 Sobic002G375400 Sobic002G375400 Sobic010G185000--Sobic002G375400 Sobic010G185000--Sobic001G481400 Sobic005G206601 Sobic005G206601 Sobic010G185000--Sobic005G206601 Sobic007G151300 Sobic007G151300 Sobic010G185000--Sobic007G151300 Sobic006G197100--Sobic002G003800 Sobic004G042000 Sobic004G042000 Sobic006G197100--Sobic004G042000 Sobic006G197100--Sobic004G349125 Sobic001G416200 Sobic001G416200 Sobic006G197100--Sobic001G416200 Sobic004G202400 Sobic004G202400 Sobic006G197100--Sobic004G202400 Sobic001G264000 Sobic001G264000 Sobic006G197100--Sobic001G264000 Sobic003G311800 Sobic003G311800 Sobic006G197100--Sobic003G311800 Sobic002G042200 Sobic002G042200 Sobic006G197100--Sobic002G042200 Sobic006G197100--Sobic003G368600 Sobic004G227800--Sobic004G349125 Sobic004G227800--Sobic003G404600 Sobic004G227800--Sobic004G042000 Sobic001G161500 Sobic001G161500 Sobic004G227800--Sobic001G161500 Sobic004G227800--Sobic006G197100 Sobic001G302600 Sobic001G302600 Sobic004G227800--Sobic001G302600 Sobic004G227800--Sobic001G416200 Sobic003G228600 Sobic003G228600 Sobic004G227800--Sobic003G228600 Sobic004G227800--Sobic006G125100 Sobic004G024100--Sobic003G404600 Sobic004G024100--Sobic006G256900 Sobic004G024100--Sobic001G147900 Sobic004G024100--Sobic006G197100 Sobic004G024100--Sobic003G152200 Sobic004G024100--Sobic006G059700 Sobic001G161000 Sobic001G161000 Sobic004G024100--Sobic001G161000 Sobic004G024100--Sobic004G042000 Sobic010G110800 Sobic010G110800 Sobic004G024100--Sobic010G110800 Sobic003G011600 Sobic003G011600 Sobic004G348400--Sobic003G011600 Sobic004G348400--Sobic003G366600 Sobic004G348400--Sobic003G368600 Sobic004G348400--Sobic002G247600 Sobic004G348400--Sobic010G185000 Sobic004G348400--Sobic002G375400 Sobic004G176600 Sobic004G176600 Sobic004G348400--Sobic004G176600 Sobic004G348400--Sobic006G044100 Sobic004G348400--Sobic006G243600 Sobic004G349125--Sobic001G416200 Sobic004G349125--Sobic006G197100 Sobic004G349125--Sobic001G302600 Sobic004G349125--Sobic001G161500 Sobic004G349125--Sobic004G042000 Sobic004G349125--Sobic003G228600 Sobic004G349125--Sobic002G003800 Sobic004G349125--Sobic004G202400 Sobic004G349125--Sobic003G311800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.