Gene annotation
Transcriptome id Sobic.004G024100.1
Synonym Sb04g002140, ATAHL1, AHL1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
AT hook motif domain containing protein, expressed
UniProt A0A194YMD8
Pfam PF03479
Panther DB PTHR31500 PTHR31500:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G12080 : AT-hook motif nuclear-localized protein 1
RAP-DB (Rice) LOC_Os02g03270.1 : AT hook motif domain containing protein, expressed
MaizeGDB (Corn) Zm00025a018796
Brachypodium -
Barley HORVU0Hr1G015180.1 , HORVU0Hr1G015180.3 , HORVU0Hr1G015180.2
Wheat TraesCS6B02G114000 , TraesCS6D02G076900 , TraesCS6A02G083100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G404600 regulatory protein, putative, expressed -
2 Sobic.006G256900 dirigent-like protein pDIR17, putative, expressed -
3 Sobic.001G147900 cytochrome P450, putative, expressed -
4 Sobic.006G197100 DNA binding protein, putative, expressed -
5 Sobic.003G152200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.006G059700 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
7 Sobic.001G161000 AGG2, putative, expressed -
8 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
9 Sobic.010G110800 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.002G042200 gibberellin receptor GID1L2, putative, expressed -
11 Sobic.004G227800 CBS domain-containing protein, putative, expressed -
12 Sobic.004G262500 lectin-like protein kinase, putative, expressed -
13 Sobic.008G102800 expressed protein -
14 Sobic.002G001700 ZOS7-01 - C2H2 zinc finger protein, expressed -
15 Sobic.003G368600 terpene synthase, putative, expressed -
16 Sobic.005G065900 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
17 Sobic.010G272300 cysteine-rich receptor-like protein kinase 28 precursor, putative, expressed -
18 Sobic.004G262200 DNA binding protein, putative, expressed -
19 Sobic.003G184100 auxin-induced protein 5NG4, putative, expressed -
20 Sobic.009G221500 lipid phosphatase protein, putative, expressed -


Gene co-expression network
sample Sobic004G024100 Sobic004G024100 Sobic003G404600 Sobic003G404600 Sobic004G024100--Sobic003G404600 Sobic006G256900 Sobic006G256900 Sobic004G024100--Sobic006G256900 Sobic001G147900 Sobic001G147900 Sobic004G024100--Sobic001G147900 Sobic006G197100 Sobic006G197100 Sobic004G024100--Sobic006G197100 Sobic003G152200 Sobic003G152200 Sobic004G024100--Sobic003G152200 Sobic006G059700 Sobic006G059700 Sobic004G024100--Sobic006G059700 Sobic001G161000 Sobic001G161000 Sobic004G024100--Sobic001G161000 Sobic004G042000 Sobic004G042000 Sobic004G024100--Sobic004G042000 Sobic010G110800 Sobic010G110800 Sobic004G024100--Sobic010G110800 Sobic003G404600--Sobic006G059700 Sobic003G366600 Sobic003G366600 Sobic003G404600--Sobic003G366600 Sobic003G404600--Sobic001G147900 Sobic010G185000 Sobic010G185000 Sobic003G404600--Sobic010G185000 Sobic003G404600--Sobic006G197100 Sobic004G227800 Sobic004G227800 Sobic003G404600--Sobic004G227800 Sobic003G404600--Sobic004G024100 Sobic004G348400 Sobic004G348400 Sobic003G404600--Sobic004G348400 Sobic004G349125 Sobic004G349125 Sobic003G404600--Sobic004G349125 Sobic010G148800 Sobic010G148800 Sobic006G256900--Sobic010G148800 Sobic005G065900 Sobic005G065900 Sobic006G256900--Sobic005G065900 Sobic007G050200 Sobic007G050200 Sobic006G256900--Sobic007G050200 Sobic009G199001 Sobic009G199001 Sobic006G256900--Sobic009G199001 Sobic006G256900--Sobic006G197100 Sobic009G221500 Sobic009G221500 Sobic006G256900--Sobic009G221500 Sobic003G140700 Sobic003G140700 Sobic006G256900--Sobic003G140700 Sobic004G322100 Sobic004G322100 Sobic006G256900--Sobic004G322100 Sobic001G058300 Sobic001G058300 Sobic006G256900--Sobic001G058300 Sobic003G368600 Sobic003G368600 Sobic001G147900--Sobic003G368600 Sobic001G147900--Sobic006G197100 Sobic001G147900--Sobic003G404600 Sobic006G243600 Sobic006G243600 Sobic001G147900--Sobic006G243600 Sobic002G003800 Sobic002G003800 Sobic001G147900--Sobic002G003800 Sobic001G147900--Sobic003G152200 Sobic001G147900--Sobic006G256900 Sobic001G147900--Sobic004G348400 Sobic001G147900--Sobic006G059700 Sobic006G197100--Sobic002G003800 Sobic006G197100--Sobic004G042000 Sobic006G197100--Sobic004G349125 Sobic001G416200 Sobic001G416200 Sobic006G197100--Sobic001G416200 Sobic004G202400 Sobic004G202400 Sobic006G197100--Sobic004G202400 Sobic001G264000 Sobic001G264000 Sobic006G197100--Sobic001G264000 Sobic003G311800 Sobic003G311800 Sobic006G197100--Sobic003G311800 Sobic002G042200 Sobic002G042200 Sobic006G197100--Sobic002G042200 Sobic006G197100--Sobic003G368600 Sobic003G152200--Sobic006G256900 Sobic003G152200--Sobic001G147900 Sobic003G152200--Sobic002G042200 Sobic003G152200--Sobic004G024100 Sobic003G152200--Sobic005G065900 Sobic003G152200--Sobic003G404600 Sobic003G015300 Sobic003G015300 Sobic003G152200--Sobic003G015300 Sobic003G152200--Sobic003G368600 Sobic003G152200--Sobic006G243600 Sobic006G059700--Sobic003G404600 Sobic004G262200 Sobic004G262200 Sobic006G059700--Sobic004G262200 Sobic003G280400 Sobic003G280400 Sobic006G059700--Sobic003G280400 Sobic010G272300 Sobic010G272300 Sobic006G059700--Sobic010G272300 Sobic010G001000 Sobic010G001000 Sobic006G059700--Sobic010G001000 Sobic006G059700--Sobic003G366600 Sobic006G059700--Sobic001G147900 Sobic006G125100 Sobic006G125100 Sobic006G059700--Sobic006G125100 Sobic002G312900 Sobic002G312900 Sobic006G059700--Sobic002G312900 Sobic001G161000--Sobic004G024100 Sobic001G161000--Sobic006G197100 Sobic001G161000--Sobic001G147900 Sobic002G185800 Sobic002G185800 Sobic001G161000--Sobic002G185800 Sobic007G165400 Sobic007G165400 Sobic001G161000--Sobic007G165400 Sobic003G079400 Sobic003G079400 Sobic001G161000--Sobic003G079400 Sobic001G161000--Sobic003G368600 Sobic001G082600 Sobic001G082600 Sobic001G161000--Sobic001G082600 Sobic007G176000 Sobic007G176000 Sobic001G161000--Sobic007G176000 Sobic004G042000--Sobic006G197100 Sobic004G042000--Sobic002G003800 Sobic004G042000--Sobic004G349125 Sobic004G042000--Sobic001G416200 Sobic002G213600 Sobic002G213600 Sobic004G042000--Sobic002G213600 Sobic001G302600 Sobic001G302600 Sobic004G042000--Sobic001G302600 Sobic004G042000--Sobic003G311800 Sobic001G304201 Sobic001G304201 Sobic004G042000--Sobic001G304201 Sobic004G042000--Sobic001G264000 Sobic010G110800--Sobic003G015300 Sobic002G001700 Sobic002G001700 Sobic010G110800--Sobic002G001700 Sobic010G110800--Sobic010G272300 Sobic010G110800--Sobic005G065900 Sobic010G110800--Sobic003G280400 Sobic010G110800--Sobic006G256900 Sobic010G110800--Sobic006G197100 Sobic010G110800--Sobic006G125100 Sobic010G110800--Sobic002G185800
Octagon: transcription factors


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