Gene annotation
Transcriptome id Sobic.010G110800.1
Synonym Sb10g009630
Functional annotation plastocyanin-like domain containing protein, putative, expressed
UniProt C5Z8E7
Pfam PF02298
Panther DB PTHR33021 PTHR33021:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT5G26330 : Cupredoxin superfamily protein
RAP-DB (Rice) LOC_Os06g15600.1 : plastocyanin-like domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a050407
Brachypodium -
Barley HORVU4Hr1G021320.2 , HORVU4Hr1G021320.1
Wheat TraesCS4A02G199100 , TraesCS4B02G116300 , TraesCS4D02G113900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G015300 expressed protein -
2 Sobic.002G001700 ZOS7-01 - C2H2 zinc finger protein, expressed -
3 Sobic.010G272300 cysteine-rich receptor-like protein kinase 28 precursor, putative, expressed -
4 Sobic.005G065900 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
5 Sobic.003G280400 hexokinase, putative, expressed K00844: hexokinase
6 Sobic.006G256900 dirigent-like protein pDIR17, putative, expressed -
7 Sobic.006G197100 DNA binding protein, putative, expressed -
8 Sobic.006G125100 ubiquitin family protein, putative, expressed -
9 Sobic.002G185800 transporter, putative, expressed -
10 Sobic.004G139300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 71D10, putative, expressed -
11 Sobic.007G165400 DNA binding protein, putative, expressed -
12 Sobic.001G264000 dehydrogenase, putative, expressed K00001: E1.1.1.1, alcohol dehydrogenase
13 Sobic.010G148800 WRKY31, expressed -
14 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
15 Sobic.001G147900 cytochrome P450, putative, expressed -
16 Sobic.003G404600 regulatory protein, putative, expressed -
17 Sobic.004G024100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
18 Sobic.007G204700 expressed protein -
19 Sobic.003G152200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.003G184100 auxin-induced protein 5NG4, putative, expressed -


Gene co-expression network
sample Sobic010G110800 Sobic010G110800 Sobic003G015300 Sobic003G015300 Sobic010G110800--Sobic003G015300 Sobic002G001700 Sobic002G001700 Sobic010G110800--Sobic002G001700 Sobic010G272300 Sobic010G272300 Sobic010G110800--Sobic010G272300 Sobic005G065900 Sobic005G065900 Sobic010G110800--Sobic005G065900 Sobic003G280400 Sobic003G280400 Sobic010G110800--Sobic003G280400 Sobic006G256900 Sobic006G256900 Sobic010G110800--Sobic006G256900 Sobic006G197100 Sobic006G197100 Sobic010G110800--Sobic006G197100 Sobic006G125100 Sobic006G125100 Sobic010G110800--Sobic006G125100 Sobic002G185800 Sobic002G185800 Sobic010G110800--Sobic002G185800 Sobic003G015300--Sobic010G110800 Sobic003G015300--Sobic005G065900 Sobic007G165400 Sobic007G165400 Sobic003G015300--Sobic007G165400 Sobic005G046700 Sobic005G046700 Sobic003G015300--Sobic005G046700 Sobic007G170300 Sobic007G170300 Sobic003G015300--Sobic007G170300 Sobic003G152200 Sobic003G152200 Sobic003G015300--Sobic003G152200 Sobic003G015300--Sobic002G001700 Sobic004G009500 Sobic004G009500 Sobic003G015300--Sobic004G009500 Sobic003G028300 Sobic003G028300 Sobic003G015300--Sobic003G028300 Sobic004G139300 Sobic004G139300 Sobic002G001700--Sobic004G139300 Sobic002G001700--Sobic006G197100 Sobic001G430100 Sobic001G430100 Sobic002G001700--Sobic001G430100 Sobic002G001700--Sobic006G256900 Sobic002G001700--Sobic010G110800 Sobic001G264000 Sobic001G264000 Sobic002G001700--Sobic001G264000 Sobic008G102800 Sobic008G102800 Sobic002G001700--Sobic008G102800 Sobic001G049900 Sobic001G049900 Sobic002G001700--Sobic001G049900 Sobic002G001700--Sobic005G065900 Sobic010G272300--Sobic010G110800 Sobic006G059700 Sobic006G059700 Sobic010G272300--Sobic006G059700 Sobic001G147900 Sobic001G147900 Sobic010G272300--Sobic001G147900 Sobic005G043000 Sobic005G043000 Sobic010G272300--Sobic005G043000 Sobic010G272300--Sobic003G280400 Sobic010G272300--Sobic006G256900 Sobic001G082600 Sobic001G082600 Sobic010G272300--Sobic001G082600 Sobic003G011600 Sobic003G011600 Sobic010G272300--Sobic003G011600 Sobic003G404600 Sobic003G404600 Sobic010G272300--Sobic003G404600 Sobic010G148800 Sobic010G148800 Sobic005G065900--Sobic010G148800 Sobic005G066432 Sobic005G066432 Sobic005G065900--Sobic005G066432 Sobic005G065900--Sobic006G256900 Sobic002G042200 Sobic002G042200 Sobic005G065900--Sobic002G042200 Sobic009G199001 Sobic009G199001 Sobic005G065900--Sobic009G199001 Sobic002G404100 Sobic002G404100 Sobic005G065900--Sobic002G404100 Sobic004G322800 Sobic004G322800 Sobic005G065900--Sobic004G322800 Sobic005G066100 Sobic005G066100 Sobic005G065900--Sobic005G066100 Sobic007G050200 Sobic007G050200 Sobic005G065900--Sobic007G050200 Sobic007G161400 Sobic007G161400 Sobic003G280400--Sobic007G161400 Sobic003G280400--Sobic006G059700 Sobic003G280400--Sobic010G110800 Sobic007G204700 Sobic007G204700 Sobic003G280400--Sobic007G204700 Sobic003G280400--Sobic010G272300 Sobic003G280400--Sobic001G264000 Sobic003G280400--Sobic005G065900 Sobic003G280400--Sobic006G197100 Sobic003G280400--Sobic006G256900 Sobic006G256900--Sobic010G148800 Sobic006G256900--Sobic005G065900 Sobic006G256900--Sobic007G050200 Sobic006G256900--Sobic009G199001 Sobic006G256900--Sobic006G197100 Sobic009G221500 Sobic009G221500 Sobic006G256900--Sobic009G221500 Sobic003G140700 Sobic003G140700 Sobic006G256900--Sobic003G140700 Sobic004G322100 Sobic004G322100 Sobic006G256900--Sobic004G322100 Sobic001G058300 Sobic001G058300 Sobic006G256900--Sobic001G058300 Sobic002G003800 Sobic002G003800 Sobic006G197100--Sobic002G003800 Sobic004G042000 Sobic004G042000 Sobic006G197100--Sobic004G042000 Sobic004G349125 Sobic004G349125 Sobic006G197100--Sobic004G349125 Sobic001G416200 Sobic001G416200 Sobic006G197100--Sobic001G416200 Sobic004G202400 Sobic004G202400 Sobic006G197100--Sobic004G202400 Sobic006G197100--Sobic001G264000 Sobic003G311800 Sobic003G311800 Sobic006G197100--Sobic003G311800 Sobic006G197100--Sobic002G042200 Sobic003G368600 Sobic003G368600 Sobic006G197100--Sobic003G368600 Sobic001G503100 Sobic001G503100 Sobic006G125100--Sobic001G503100 Sobic010G063000 Sobic010G063000 Sobic006G125100--Sobic010G063000 Sobic002G247600 Sobic002G247600 Sobic006G125100--Sobic002G247600 Sobic002G125700 Sobic002G125700 Sobic006G125100--Sobic002G125700 Sobic010G185000 Sobic010G185000 Sobic006G125100--Sobic010G185000 Sobic004G348400 Sobic004G348400 Sobic006G125100--Sobic004G348400 Sobic001G333400 Sobic001G333400 Sobic006G125100--Sobic001G333400 Sobic003G255500 Sobic003G255500 Sobic006G125100--Sobic003G255500 Sobic006G277600 Sobic006G277600 Sobic006G125100--Sobic006G277600 Sobic002G185800--Sobic005G046700 Sobic002G185800--Sobic004G139300 Sobic002G216100 Sobic002G216100 Sobic002G185800--Sobic002G216100 Sobic002G185800--Sobic006G197100 Sobic002G185800--Sobic001G264000 Sobic007G178900 Sobic007G178900 Sobic002G185800--Sobic007G178900 Sobic007G176100 Sobic007G176100 Sobic002G185800--Sobic007G176100 Sobic002G185800--Sobic006G256900 Sobic007G176000 Sobic007G176000 Sobic002G185800--Sobic007G176000
Octagon: transcription factors


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