Gene annotation
Transcriptome id Sobic.004G139300.1
Synonym Sb04g016970, CYP71B2
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
cytochrome P450 71D10, putative, expressed
UniProt C5Y125
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF58
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT1G13080 : cytochrome P450, family 71, subfamily B, polypeptide 2
RAP-DB (Rice) LOC_Os01g27890.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a031431 , Zm00025a019313 , Zm00025a019311
Brachypodium -
Barley HORVU7Hr1G116170.1 , HORVU7Hr1G116170.3 , HORVU7Hr1G116170.2 , HORVU7Hr1G116170.5 , HORVU7Hr1G116170.4
Wheat TraesCS6D02G303800 , TraesCS7D02G001900 , TraesCS4A02G496500 , TraesCS6D02G304000 , TraesCS4A02G498300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G216100 cytochrome P450, putative, expressed -
2 Sobic.002G042200 gibberellin receptor GID1L2, putative, expressed -
3 Sobic.002G001700 ZOS7-01 - C2H2 zinc finger protein, expressed -
4 Sobic.002G185800 transporter, putative, expressed -
5 Sobic.010G096400 proteins of unknown function domain containing protein, expressed -
6 Sobic.006G197100 DNA binding protein, putative, expressed -
7 Sobic.007G178900 CXE carboxylesterase, putative, expressed -
8 Sobic.007G176000 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
9 Sobic.003G351600 expressed protein -
10 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
11 Sobic.007G030501 - -
12 Sobic.004G348800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
13 Sobic.006G256900 dirigent-like protein pDIR17, putative, expressed -
14 Sobic.005G046700 LTPL114 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.005G065900 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
16 Sobic.001G430100 - -
17 Sobic.010G148800 WRKY31, expressed -
18 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
19 Sobic.007G176100 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
20 Sobic.002G404100 annexin, putative, expressed -


Gene co-expression network
sample Sobic004G139300 Sobic004G139300 Sobic002G216100 Sobic002G216100 Sobic004G139300--Sobic002G216100 Sobic002G042200 Sobic002G042200 Sobic004G139300--Sobic002G042200 Sobic002G001700 Sobic002G001700 Sobic004G139300--Sobic002G001700 Sobic002G185800 Sobic002G185800 Sobic004G139300--Sobic002G185800 Sobic010G096400 Sobic010G096400 Sobic004G139300--Sobic010G096400 Sobic006G197100 Sobic006G197100 Sobic004G139300--Sobic006G197100 Sobic007G178900 Sobic007G178900 Sobic004G139300--Sobic007G178900 Sobic007G176000 Sobic007G176000 Sobic004G139300--Sobic007G176000 Sobic003G351600 Sobic003G351600 Sobic004G139300--Sobic003G351600 Sobic002G216100--Sobic004G139300 Sobic002G404100 Sobic002G404100 Sobic002G216100--Sobic002G404100 Sobic002G216100--Sobic007G178900 Sobic010G113100 Sobic010G113100 Sobic002G216100--Sobic010G113100 Sobic002G216100--Sobic007G176000 Sobic002G216100--Sobic002G185800 Sobic001G360500 Sobic001G360500 Sobic002G216100--Sobic001G360500 Sobic005G046700 Sobic005G046700 Sobic002G216100--Sobic005G046700 Sobic002G216100--Sobic002G042200 Sobic002G042200--Sobic006G197100 Sobic002G042200--Sobic004G139300 Sobic002G261500 Sobic002G261500 Sobic002G042200--Sobic002G261500 Sobic005G065900 Sobic005G065900 Sobic002G042200--Sobic005G065900 Sobic010G148800 Sobic010G148800 Sobic002G042200--Sobic010G148800 Sobic004G202400 Sobic004G202400 Sobic002G042200--Sobic004G202400 Sobic003G157600 Sobic003G157600 Sobic002G042200--Sobic003G157600 Sobic006G251400 Sobic006G251400 Sobic002G042200--Sobic006G251400 Sobic004G209400 Sobic004G209400 Sobic002G042200--Sobic004G209400 Sobic002G001700--Sobic004G139300 Sobic002G001700--Sobic006G197100 Sobic001G430100 Sobic001G430100 Sobic002G001700--Sobic001G430100 Sobic006G256900 Sobic006G256900 Sobic002G001700--Sobic006G256900 Sobic010G110800 Sobic010G110800 Sobic002G001700--Sobic010G110800 Sobic001G264000 Sobic001G264000 Sobic002G001700--Sobic001G264000 Sobic008G102800 Sobic008G102800 Sobic002G001700--Sobic008G102800 Sobic001G049900 Sobic001G049900 Sobic002G001700--Sobic001G049900 Sobic002G001700--Sobic005G065900 Sobic002G185800--Sobic005G046700 Sobic002G185800--Sobic004G139300 Sobic002G185800--Sobic002G216100 Sobic002G185800--Sobic006G197100 Sobic002G185800--Sobic001G264000 Sobic002G185800--Sobic007G178900 Sobic007G176100 Sobic007G176100 Sobic002G185800--Sobic007G176100 Sobic002G185800--Sobic006G256900 Sobic002G185800--Sobic007G176000 Sobic008G055100 Sobic008G055100 Sobic010G096400--Sobic008G055100 Sobic010G096400--Sobic004G139300 Sobic002G365550 Sobic002G365550 Sobic010G096400--Sobic002G365550 Sobic002G365801 Sobic002G365801 Sobic010G096400--Sobic002G365801 Sobic009G088500 Sobic009G088500 Sobic010G096400--Sobic009G088500 Sobic010G096400--Sobic002G216100 Sobic010G096400--Sobic001G360500 Sobic002G368300 Sobic002G368300 Sobic010G096400--Sobic002G368300 Sobic010G096400--Sobic007G176000 Sobic002G003800 Sobic002G003800 Sobic006G197100--Sobic002G003800 Sobic004G042000 Sobic004G042000 Sobic006G197100--Sobic004G042000 Sobic004G349125 Sobic004G349125 Sobic006G197100--Sobic004G349125 Sobic001G416200 Sobic001G416200 Sobic006G197100--Sobic001G416200 Sobic006G197100--Sobic004G202400 Sobic006G197100--Sobic001G264000 Sobic003G311800 Sobic003G311800 Sobic006G197100--Sobic003G311800 Sobic006G197100--Sobic002G042200 Sobic003G368600 Sobic003G368600 Sobic006G197100--Sobic003G368600 Sobic007G178900--Sobic007G176000 Sobic007G178900--Sobic002G216100 Sobic007G178900--Sobic004G139300 Sobic007G178900--Sobic002G185800 Sobic007G178900--Sobic005G046700 Sobic007G178900--Sobic002G368300 Sobic007G178900--Sobic006G197100 Sobic007G178900--Sobic008G055100 Sobic007G178900--Sobic007G176100 Sobic007G176000--Sobic007G176100 Sobic007G176000--Sobic007G178900 Sobic007G030501 Sobic007G030501 Sobic007G176000--Sobic007G030501 Sobic007G176000--Sobic002G216100 Sobic007G176000--Sobic006G197100 Sobic005G061200 Sobic005G061200 Sobic007G176000--Sobic005G061200 Sobic007G176000--Sobic002G185800 Sobic007G176000--Sobic004G139300 Sobic007G176000--Sobic008G055100 Sobic003G351600--Sobic002G042200 Sobic007G050200 Sobic007G050200 Sobic003G351600--Sobic007G050200 Sobic003G351600--Sobic004G139300 Sobic003G351600--Sobic006G256900 Sobic001G058300 Sobic001G058300 Sobic003G351600--Sobic001G058300 Sobic003G351600--Sobic010G113100 Sobic004G322100 Sobic004G322100 Sobic003G351600--Sobic004G322100 Sobic003G351600--Sobic002G216100 Sobic002G101400 Sobic002G101400 Sobic003G351600--Sobic002G101400
Octagon: transcription factors


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