Gene annotation
Transcriptome id Sobic.002G042200.1
Synonym Sb02g003620
Functional annotation gibberellin receptor GID1L2, putative, expressed
UniProt C5XA94
Pfam PF12695
Panther DB PTHR23024 PTHR23024:SF162
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G06570 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os07g06860.1 : gibberellin receptor GID1L2, putative, expressed
MaizeGDB (Corn) Zm00025a045069 , Zm00025a045071
Brachypodium PNT61001
Barley HORVU6Hr1G077260.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G197100 DNA binding protein, putative, expressed -
2 Sobic.004G139300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 71D10, putative, expressed -
3 Sobic.002G261500 AIR12, putative, expressed -
4 Sobic.005G065900 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
5 Sobic.010G148800 WRKY31, expressed -
6 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
7 Sobic.003G157600 expressed protein -
8 Sobic.006G251400 heavy metal-associated domain containing protein, expressed -
9 Sobic.004G209400 carbonyl reductase 3, putative, expressed -
10 Sobic.007G090469 - -
11 Sobic.007G050200 DNA binding protein, putative, expressed -
12 Sobic.006G122800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
13 Sobic.003G368600 terpene synthase, putative, expressed -
14 Sobic.002G216100 cytochrome P450, putative, expressed -
15 Sobic.003G351600 expressed protein -
16 Sobic.006G256900 dirigent-like protein pDIR17, putative, expressed -
17 Sobic.001G238300 expansin precursor, putative, expressed -
18 Sobic.009G199001 - -
19 Sobic.003G417100 esterase, putative, expressed -
20 Sobic.009G074500 expressed protein -


Gene co-expression network
sample Sobic002G042200 Sobic002G042200 Sobic006G197100 Sobic006G197100 Sobic002G042200--Sobic006G197100 Sobic004G139300 Sobic004G139300 Sobic002G042200--Sobic004G139300 Sobic002G261500 Sobic002G261500 Sobic002G042200--Sobic002G261500 Sobic005G065900 Sobic005G065900 Sobic002G042200--Sobic005G065900 Sobic010G148800 Sobic010G148800 Sobic002G042200--Sobic010G148800 Sobic004G202400 Sobic004G202400 Sobic002G042200--Sobic004G202400 Sobic003G157600 Sobic003G157600 Sobic002G042200--Sobic003G157600 Sobic006G251400 Sobic006G251400 Sobic002G042200--Sobic006G251400 Sobic004G209400 Sobic004G209400 Sobic002G042200--Sobic004G209400 Sobic002G003800 Sobic002G003800 Sobic006G197100--Sobic002G003800 Sobic004G042000 Sobic004G042000 Sobic006G197100--Sobic004G042000 Sobic004G349125 Sobic004G349125 Sobic006G197100--Sobic004G349125 Sobic001G416200 Sobic001G416200 Sobic006G197100--Sobic001G416200 Sobic006G197100--Sobic004G202400 Sobic001G264000 Sobic001G264000 Sobic006G197100--Sobic001G264000 Sobic003G311800 Sobic003G311800 Sobic006G197100--Sobic003G311800 Sobic006G197100--Sobic002G042200 Sobic003G368600 Sobic003G368600 Sobic006G197100--Sobic003G368600 Sobic002G216100 Sobic002G216100 Sobic004G139300--Sobic002G216100 Sobic004G139300--Sobic002G042200 Sobic002G001700 Sobic002G001700 Sobic004G139300--Sobic002G001700 Sobic002G185800 Sobic002G185800 Sobic004G139300--Sobic002G185800 Sobic010G096400 Sobic010G096400 Sobic004G139300--Sobic010G096400 Sobic004G139300--Sobic006G197100 Sobic007G178900 Sobic007G178900 Sobic004G139300--Sobic007G178900 Sobic007G176000 Sobic007G176000 Sobic004G139300--Sobic007G176000 Sobic003G351600 Sobic003G351600 Sobic004G139300--Sobic003G351600 Sobic001G238300 Sobic001G238300 Sobic002G261500--Sobic001G238300 Sobic002G425000 Sobic002G425000 Sobic002G261500--Sobic002G425000 Sobic004G297900 Sobic004G297900 Sobic002G261500--Sobic004G297900 Sobic010G212500 Sobic010G212500 Sobic002G261500--Sobic010G212500 Sobic002G261500--Sobic002G042200 Sobic003G053400 Sobic003G053400 Sobic002G261500--Sobic003G053400 Sobic007G050200 Sobic007G050200 Sobic002G261500--Sobic007G050200 Sobic001G379400 Sobic001G379400 Sobic002G261500--Sobic001G379400 Sobic006G260200 Sobic006G260200 Sobic002G261500--Sobic006G260200 Sobic005G065900--Sobic010G148800 Sobic005G066432 Sobic005G066432 Sobic005G065900--Sobic005G066432 Sobic006G256900 Sobic006G256900 Sobic005G065900--Sobic006G256900 Sobic005G065900--Sobic002G042200 Sobic009G199001 Sobic009G199001 Sobic005G065900--Sobic009G199001 Sobic002G404100 Sobic002G404100 Sobic005G065900--Sobic002G404100 Sobic004G322800 Sobic004G322800 Sobic005G065900--Sobic004G322800 Sobic005G066100 Sobic005G066100 Sobic005G065900--Sobic005G066100 Sobic005G065900--Sobic007G050200 Sobic010G148800--Sobic005G065900 Sobic010G148800--Sobic004G322800 Sobic010G148800--Sobic006G256900 Sobic010G148800--Sobic005G066432 Sobic010G148800--Sobic009G199001 Sobic010G148800--Sobic002G404100 Sobic010G148800--Sobic002G042200 Sobic009G219200 Sobic009G219200 Sobic010G148800--Sobic009G219200 Sobic006G079300 Sobic006G079300 Sobic010G148800--Sobic006G079300 Sobic004G202400--Sobic006G197100 Sobic004G202400--Sobic001G416200 Sobic001G237900 Sobic001G237900 Sobic004G202400--Sobic001G237900 SobicK026900 SobicK026900 Sobic004G202400--SobicK026900 Sobic004G202400--Sobic003G157600 Sobic004G202400--Sobic004G349125 Sobic004G202400--Sobic004G042000 Sobic004G202400--Sobic002G042200 Sobic004G202400--Sobic003G311800 Sobic003G157600--Sobic004G202400 Sobic003G157600--Sobic002G042200 Sobic003G157600--Sobic006G197100 Sobic003G184100 Sobic003G184100 Sobic003G157600--Sobic003G184100 Sobic003G384700 Sobic003G384700 Sobic003G157600--Sobic003G384700 Sobic003G157600--Sobic001G416200 Sobic003G157600--Sobic002G261500 Sobic006G122800 Sobic006G122800 Sobic003G157600--Sobic006G122800 Sobic003G157600--Sobic004G349125 Sobic006G251400--Sobic002G042200 Sobic006G251400--Sobic006G122800 Sobic001G058300 Sobic001G058300 Sobic006G251400--Sobic001G058300 Sobic006G174300 Sobic006G174300 Sobic006G251400--Sobic006G174300 Sobic006G251400--Sobic007G050200 Sobic006G251400--Sobic003G351600 Sobic002G101400 Sobic002G101400 Sobic006G251400--Sobic002G101400 Sobic004G164300 Sobic004G164300 Sobic006G251400--Sobic004G164300 Sobic010G113100 Sobic010G113100 Sobic006G251400--Sobic010G113100 Sobic003G140700 Sobic003G140700 Sobic004G209400--Sobic003G140700 Sobic001G438200 Sobic001G438200 Sobic004G209400--Sobic001G438200 Sobic004G209400--Sobic009G219200 Sobic002G183700 Sobic002G183700 Sobic004G209400--Sobic002G183700 Sobic002G255000 Sobic002G255000 Sobic004G209400--Sobic002G255000 Sobic004G209400--Sobic001G058300 Sobic007G090469 Sobic007G090469 Sobic004G209400--Sobic007G090469 Sobic004G209400--Sobic002G042200 Sobic003G282200 Sobic003G282200 Sobic004G209400--Sobic003G282200
Octagon: transcription factors


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