Gene annotation
Transcriptome id Sobic.004G209400.2,Sobic.004G209400.1
Synonym Sb04g025500
Functional annotation carbonyl reductase 3, putative, expressed
UniProt A0A194YQX6 , C5XX91
Pfam PF08659 PF00106
Panther DB PTHR24322 PTHR24322:SF461
NCBI CDD KOG1208; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G59710 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os02g39490.1 : carbonyl reductase 3, putative, expressed
MaizeGDB (Corn) Zm00025a031905 , Zm00025a056385 , Zm00025a010829
Brachypodium KQJ83369 , PNT69033
Barley HORVU6Hr1G055660.4 , HORVU6Hr1G055660.5 , HORVU6Hr1G055660.2 , HORVU6Hr1G055660.3 , HORVU6Hr1G055660.8 , HORVU2Hr1G085650.1 , HORVU6Hr1G055660.7 , HORVU6Hr1G055660.1 , HORVU2Hr1G085650.2 , HORVU2Hr1G085650.3 , HORVU2Hr1G085650.4 , HORVU2Hr1G085650.5 , HORVU6Hr1G055660.6
Wheat TraesCS2B02G371400 , TraesCS2B02G371400 , TraesCS6D02G200400 , TraesCS6B02G247400 , TraesCS6B02G247400 , TraesCS2A02G353500 , TraesCS2A02G353500 , TraesCS2D02G350600 , TraesCS6A02G218000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G140700 peroxidase precursor, putative, expressed -
2 Sobic.001G438200 expressed protein -
3 Sobic.009G219200 expressed protein -
4 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
5 Sobic.002G255000 AIR12, putative, expressed -
6 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
7 Sobic.007G090469 - -
8 Sobic.002G042200 gibberellin receptor GID1L2, putative, expressed -
9 Sobic.003G282200 POEI44 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
10 Sobic.009G199001 - -
11 Sobic.007G158800 patatin, putative, expressed -
12 Sobic.006G079300 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.006G225500 plastocyanin-like domain containing protein, putative, expressed -
14 Sobic.004G322800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.001G242100 expressed protein -
16 Sobic.004G348800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
17 Sobic.001G062500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde oxidase, putative, expressed K11817: indole-3-acetaldehyde oxidase
18 Sobic.007G050200 DNA binding protein, putative, expressed -
19 Sobic.002G301900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
20 Sobic.001G238200 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic004G209400 Sobic004G209400 Sobic003G140700 Sobic003G140700 Sobic004G209400--Sobic003G140700 Sobic001G438200 Sobic001G438200 Sobic004G209400--Sobic001G438200 Sobic009G219200 Sobic009G219200 Sobic004G209400--Sobic009G219200 Sobic002G183700 Sobic002G183700 Sobic004G209400--Sobic002G183700 Sobic002G255000 Sobic002G255000 Sobic004G209400--Sobic002G255000 Sobic001G058300 Sobic001G058300 Sobic004G209400--Sobic001G058300 Sobic007G090469 Sobic007G090469 Sobic004G209400--Sobic007G090469 Sobic002G042200 Sobic002G042200 Sobic004G209400--Sobic002G042200 Sobic003G282200 Sobic003G282200 Sobic004G209400--Sobic003G282200 Sobic003G140700--Sobic009G219200 Sobic003G064800 Sobic003G064800 Sobic003G140700--Sobic003G064800 Sobic006G225500 Sobic006G225500 Sobic003G140700--Sobic006G225500 Sobic004G322100 Sobic004G322100 Sobic003G140700--Sobic004G322100 Sobic003G140700--Sobic001G438200 Sobic003G140700--Sobic002G255000 Sobic001G238200 Sobic001G238200 Sobic003G140700--Sobic001G238200 Sobic005G127400 Sobic005G127400 Sobic003G140700--Sobic005G127400 Sobic004G110700 Sobic004G110700 Sobic003G140700--Sobic004G110700 Sobic001G438200--Sobic003G064800 Sobic001G438200--Sobic002G255000 Sobic001G438200--Sobic003G140700 Sobic003G319400 Sobic003G319400 Sobic001G438200--Sobic003G319400 Sobic001G438200--Sobic009G219200 Sobic006G106900 Sobic006G106900 Sobic001G438200--Sobic006G106900 Sobic004G306900 Sobic004G306900 Sobic001G438200--Sobic004G306900 Sobic006G273300 Sobic006G273300 Sobic001G438200--Sobic006G273300 Sobic001G438200--Sobic004G322100 Sobic009G219200--Sobic003G140700 Sobic009G219200--Sobic001G438200 Sobic001G237800 Sobic001G237800 Sobic009G219200--Sobic001G237800 Sobic009G219200--Sobic002G255000 Sobic009G219200--Sobic003G064800 Sobic009G219200--Sobic004G306900 Sobic006G079300 Sobic006G079300 Sobic009G219200--Sobic006G079300 Sobic001G238000 Sobic001G238000 Sobic009G219200--Sobic001G238000 Sobic009G219200--Sobic001G238200 Sobic007G158800 Sobic007G158800 Sobic002G183700--Sobic007G158800 Sobic004G029100 Sobic004G029100 Sobic002G183700--Sobic004G029100 Sobic001G502000 Sobic001G502000 Sobic002G183700--Sobic001G502000 Sobic002G183700--Sobic003G140700 Sobic006G089000 Sobic006G089000 Sobic002G183700--Sobic006G089000 Sobic006G274933 Sobic006G274933 Sobic002G183700--Sobic006G274933 Sobic002G183700--Sobic006G225500 Sobic002G183700--Sobic004G322100 Sobic003G311800 Sobic003G311800 Sobic002G183700--Sobic003G311800 Sobic002G255000--Sobic003G064800 Sobic007G008600 Sobic007G008600 Sobic002G255000--Sobic007G008600 Sobic002G255000--Sobic001G438200 Sobic002G255000--Sobic003G140700 Sobic002G255000--Sobic005G127400 Sobic009G186500 Sobic009G186500 Sobic002G255000--Sobic009G186500 Sobic002G255000--Sobic006G225500 Sobic002G255000--Sobic001G238200 Sobic007G100700 Sobic007G100700 Sobic002G255000--Sobic007G100700 Sobic001G058300--Sobic001G238200 Sobic001G058300--Sobic001G438200 Sobic001G058300--Sobic003G140700 Sobic001G058300--Sobic003G319400 Sobic001G058300--Sobic004G306900 Sobic005G202300 Sobic005G202300 Sobic001G058300--Sobic005G202300 Sobic001G058300--Sobic003G282200 Sobic001G058300--Sobic006G106900 Sobic006G174300 Sobic006G174300 Sobic001G058300--Sobic006G174300 Sobic006G172601 Sobic006G172601 Sobic007G090469--Sobic006G172601 Sobic004G297900 Sobic004G297900 Sobic007G090469--Sobic004G297900 Sobic007G090469--Sobic003G311800 SobicK026900 SobicK026900 Sobic007G090469--SobicK026900 Sobic001G238300 Sobic001G238300 Sobic007G090469--Sobic001G238300 Sobic007G090469--Sobic004G209400 Sobic004G295100 Sobic004G295100 Sobic007G090469--Sobic004G295100 Sobic005G156500 Sobic005G156500 Sobic007G090469--Sobic005G156500 Sobic001G300500 Sobic001G300500 Sobic007G090469--Sobic001G300500 Sobic006G197100 Sobic006G197100 Sobic002G042200--Sobic006G197100 Sobic004G139300 Sobic004G139300 Sobic002G042200--Sobic004G139300 Sobic002G261500 Sobic002G261500 Sobic002G042200--Sobic002G261500 Sobic005G065900 Sobic005G065900 Sobic002G042200--Sobic005G065900 Sobic010G148800 Sobic010G148800 Sobic002G042200--Sobic010G148800 Sobic004G202400 Sobic004G202400 Sobic002G042200--Sobic004G202400 Sobic003G157600 Sobic003G157600 Sobic002G042200--Sobic003G157600 Sobic006G251400 Sobic006G251400 Sobic002G042200--Sobic006G251400 Sobic002G042200--Sobic004G209400 Sobic009G065800 Sobic009G065800 Sobic003G282200--Sobic009G065800 Sobic003G282200--Sobic003G319400 Sobic003G282200--Sobic001G438200 Sobic003G282200--Sobic001G058300 Sobic003G282200--Sobic006G106900 Sobic007G086300 Sobic007G086300 Sobic003G282200--Sobic007G086300 Sobic003G282200--Sobic005G202300 Sobic003G282200--Sobic002G255000 Sobic003G282200--Sobic004G306900
Octagon: transcription factors


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