Gene annotation
Transcriptome id Sobic.003G351600.1
Synonym Sb03g039420
Functional annotation expressed protein
UniProt C5XPP0
Pfam -
Panther DB PTHR33544
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g62360.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS3A02G358700 , TraesCS3B02G391500 , TraesCS3D02G353000
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G042200 gibberellin receptor GID1L2, putative, expressed -
2 Sobic.007G050200 DNA binding protein, putative, expressed -
3 Sobic.004G139300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 71D10, putative, expressed -
4 Sobic.006G256900 dirigent-like protein pDIR17, putative, expressed -
5 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
6 Sobic.010G113100 cytokinin-O-glucosyltransferase 2, putative, expressed -
7 Sobic.004G322100 hypro1, putative, expressed -
8 Sobic.002G216100 cytochrome P450, putative, expressed -
9 Sobic.002G101400 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
10 Sobic.003G140700 peroxidase precursor, putative, expressed -
11 Sobic.002G185800 transporter, putative, expressed -
12 Sobic.009G199001 - -
13 Sobic.004G209400 carbonyl reductase 3, putative, expressed -
14 Sobic.006G197100 DNA binding protein, putative, expressed -
15 Sobic.005G080400 1-aminocyclopropane-1-carboxylate oxidase 2, putative, expressed -
16 Sobic.006G251400 heavy metal-associated domain containing protein, expressed -
17 Sobic.004G306900 amino acid transporter, putative, expressed -
18 Sobic.002G228800 expressed protein -
19 Sobic.010G148800 WRKY31, expressed -
20 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -


Gene co-expression network
sample Sobic003G351600 Sobic003G351600 Sobic002G042200 Sobic002G042200 Sobic003G351600--Sobic002G042200 Sobic007G050200 Sobic007G050200 Sobic003G351600--Sobic007G050200 Sobic004G139300 Sobic004G139300 Sobic003G351600--Sobic004G139300 Sobic006G256900 Sobic006G256900 Sobic003G351600--Sobic006G256900 Sobic001G058300 Sobic001G058300 Sobic003G351600--Sobic001G058300 Sobic010G113100 Sobic010G113100 Sobic003G351600--Sobic010G113100 Sobic004G322100 Sobic004G322100 Sobic003G351600--Sobic004G322100 Sobic002G216100 Sobic002G216100 Sobic003G351600--Sobic002G216100 Sobic002G101400 Sobic002G101400 Sobic003G351600--Sobic002G101400 Sobic006G197100 Sobic006G197100 Sobic002G042200--Sobic006G197100 Sobic002G042200--Sobic004G139300 Sobic002G261500 Sobic002G261500 Sobic002G042200--Sobic002G261500 Sobic005G065900 Sobic005G065900 Sobic002G042200--Sobic005G065900 Sobic010G148800 Sobic010G148800 Sobic002G042200--Sobic010G148800 Sobic004G202400 Sobic004G202400 Sobic002G042200--Sobic004G202400 Sobic003G157600 Sobic003G157600 Sobic002G042200--Sobic003G157600 Sobic006G251400 Sobic006G251400 Sobic002G042200--Sobic006G251400 Sobic004G209400 Sobic004G209400 Sobic002G042200--Sobic004G209400 Sobic007G050200--Sobic004G322100 Sobic004G323300 Sobic004G323300 Sobic007G050200--Sobic004G323300 Sobic009G221500 Sobic009G221500 Sobic007G050200--Sobic009G221500 Sobic003G140700 Sobic003G140700 Sobic007G050200--Sobic003G140700 Sobic001G430100 Sobic001G430100 Sobic007G050200--Sobic001G430100 Sobic007G050200--Sobic006G256900 Sobic007G050200--Sobic001G058300 Sobic009G199001 Sobic009G199001 Sobic007G050200--Sobic009G199001 Sobic009G219200 Sobic009G219200 Sobic007G050200--Sobic009G219200 Sobic004G139300--Sobic002G216100 Sobic004G139300--Sobic002G042200 Sobic002G001700 Sobic002G001700 Sobic004G139300--Sobic002G001700 Sobic002G185800 Sobic002G185800 Sobic004G139300--Sobic002G185800 Sobic010G096400 Sobic010G096400 Sobic004G139300--Sobic010G096400 Sobic004G139300--Sobic006G197100 Sobic007G178900 Sobic007G178900 Sobic004G139300--Sobic007G178900 Sobic007G176000 Sobic007G176000 Sobic004G139300--Sobic007G176000 Sobic004G139300--Sobic003G351600 Sobic006G256900--Sobic010G148800 Sobic006G256900--Sobic005G065900 Sobic006G256900--Sobic007G050200 Sobic006G256900--Sobic009G199001 Sobic006G256900--Sobic006G197100 Sobic006G256900--Sobic009G221500 Sobic006G256900--Sobic003G140700 Sobic006G256900--Sobic004G322100 Sobic006G256900--Sobic001G058300 Sobic001G238200 Sobic001G238200 Sobic001G058300--Sobic001G238200 Sobic001G438200 Sobic001G438200 Sobic001G058300--Sobic001G438200 Sobic001G058300--Sobic003G140700 Sobic003G319400 Sobic003G319400 Sobic001G058300--Sobic003G319400 Sobic004G306900 Sobic004G306900 Sobic001G058300--Sobic004G306900 Sobic005G202300 Sobic005G202300 Sobic001G058300--Sobic005G202300 Sobic003G282200 Sobic003G282200 Sobic001G058300--Sobic003G282200 Sobic006G106900 Sobic006G106900 Sobic001G058300--Sobic006G106900 Sobic006G174300 Sobic006G174300 Sobic001G058300--Sobic006G174300 Sobic010G113100--Sobic002G101400 Sobic010G028100 Sobic010G028100 Sobic010G113100--Sobic010G028100 Sobic006G092700 Sobic006G092700 Sobic010G113100--Sobic006G092700 Sobic008G164450 Sobic008G164450 Sobic010G113100--Sobic008G164450 Sobic006G135300 Sobic006G135300 Sobic010G113100--Sobic006G135300 Sobic007G057400 Sobic007G057400 Sobic010G113100--Sobic007G057400 Sobic010G113100--Sobic002G216100 Sobic001G506800 Sobic001G506800 Sobic010G113100--Sobic001G506800 Sobic001G360500 Sobic001G360500 Sobic010G113100--Sobic001G360500 Sobic003G000100 Sobic003G000100 Sobic004G322100--Sobic003G000100 Sobic010G152400 Sobic010G152400 Sobic004G322100--Sobic010G152400 Sobic004G322100--Sobic003G140700 Sobic004G322100--Sobic004G323300 Sobic004G322100--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic004G322100--Sobic006G019700 Sobic004G029100 Sobic004G029100 Sobic004G322100--Sobic004G029100 Sobic006G028500 Sobic006G028500 Sobic004G322100--Sobic006G028500 Sobic004G110700 Sobic004G110700 Sobic004G322100--Sobic004G110700 Sobic002G216100--Sobic004G139300 Sobic002G404100 Sobic002G404100 Sobic002G216100--Sobic002G404100 Sobic002G216100--Sobic007G178900 Sobic002G216100--Sobic010G113100 Sobic002G216100--Sobic007G176000 Sobic002G216100--Sobic002G185800 Sobic002G216100--Sobic001G360500 Sobic005G046700 Sobic005G046700 Sobic002G216100--Sobic005G046700 Sobic002G216100--Sobic002G042200 Sobic002G101400--Sobic010G113100 Sobic002G101400--Sobic001G360500 Sobic002G101400--Sobic005G046700 Sobic002G101400--Sobic006G092700 Sobic007G170300 Sobic007G170300 Sobic002G101400--Sobic007G170300 Sobic003G053600 Sobic003G053600 Sobic002G101400--Sobic003G053600 Sobic007G073000 Sobic007G073000 Sobic002G101400--Sobic007G073000 Sobic002G101400--Sobic007G057400 Sobic002G101400--Sobic010G028100
Octagon: transcription factors


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