Gene annotation
Transcriptome id Sobic.002G228800.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QCY9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g28780.1 : expressed protein
MaizeGDB (Corn) Zm00025a047297
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G080400 1-aminocyclopropane-1-carboxylate oxidase 2, putative, expressed -
2 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
3 Sobic.007G021900 carrier, putative, expressed -
4 Sobic.001G232200 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
5 Sobic.006G003600 transporter family protein, putative, expressed -
6 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
7 Sobic.003G351600 expressed protein -
8 Sobic.005G166700 sulfotransferase domain containing protein, expressed -
9 Sobic.002G216100 cytochrome P450, putative, expressed -
10 Sobic.003G140700 peroxidase precursor, putative, expressed -
11 Sobic.003G280000 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.009G186500 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.004G322100 hypro1, putative, expressed -
14 Sobic.003G353200 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Laccase 2 LAC2 (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
15 Sobic.007G158800 patatin, putative, expressed -
16 Sobic.004G306900 amino acid transporter, putative, expressed -
17 Sobic.010G028100 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
18 Sobic.003G399600 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
20 Sobic.007G057400 - -


Gene co-expression network
sample Sobic002G228800 Sobic002G228800 Sobic005G080400 Sobic005G080400 Sobic002G228800--Sobic005G080400 Sobic001G058300 Sobic001G058300 Sobic002G228800--Sobic001G058300 Sobic007G021900 Sobic007G021900 Sobic002G228800--Sobic007G021900 Sobic001G232200 Sobic001G232200 Sobic002G228800--Sobic001G232200 Sobic006G003600 Sobic006G003600 Sobic002G228800--Sobic006G003600 Sobic003G000100 Sobic003G000100 Sobic002G228800--Sobic003G000100 Sobic003G351600 Sobic003G351600 Sobic002G228800--Sobic003G351600 Sobic005G166700 Sobic005G166700 Sobic002G228800--Sobic005G166700 Sobic002G216100 Sobic002G216100 Sobic002G228800--Sobic002G216100 Sobic005G203200 Sobic005G203200 Sobic005G080400--Sobic005G203200 Sobic005G080400--Sobic002G228800 Sobic004G038700 Sobic004G038700 Sobic005G080400--Sobic004G038700 Sobic005G202700 Sobic005G202700 Sobic005G080400--Sobic005G202700 Sobic007G057400 Sobic007G057400 Sobic005G080400--Sobic007G057400 Sobic009G035300 Sobic009G035300 Sobic005G080400--Sobic009G035300 Sobic002G326500 Sobic002G326500 Sobic005G080400--Sobic002G326500 Sobic005G080400--Sobic003G351600 Sobic005G080400--Sobic005G166700 Sobic001G238200 Sobic001G238200 Sobic001G058300--Sobic001G238200 Sobic001G438200 Sobic001G438200 Sobic001G058300--Sobic001G438200 Sobic003G140700 Sobic003G140700 Sobic001G058300--Sobic003G140700 Sobic003G319400 Sobic003G319400 Sobic001G058300--Sobic003G319400 Sobic004G306900 Sobic004G306900 Sobic001G058300--Sobic004G306900 Sobic005G202300 Sobic005G202300 Sobic001G058300--Sobic005G202300 Sobic003G282200 Sobic003G282200 Sobic001G058300--Sobic003G282200 Sobic006G106900 Sobic006G106900 Sobic001G058300--Sobic006G106900 Sobic006G174300 Sobic006G174300 Sobic001G058300--Sobic006G174300 Sobic007G021900--Sobic006G003600 Sobic007G021900--Sobic002G228800 Sobic001G360400 Sobic001G360400 Sobic007G021900--Sobic001G360400 Sobic006G103300 Sobic006G103300 Sobic007G021900--Sobic006G103300 Sobic007G021900--Sobic003G140700 Sobic007G100700 Sobic007G100700 Sobic007G021900--Sobic007G100700 Sobic003G140600 Sobic003G140600 Sobic007G021900--Sobic003G140600 Sobic007G021900--Sobic004G038700 Sobic004G119800 Sobic004G119800 Sobic007G021900--Sobic004G119800 Sobic001G232200--Sobic005G166700 Sobic001G487800 Sobic001G487800 Sobic001G232200--Sobic001G487800 Sobic010G267200 Sobic010G267200 Sobic001G232200--Sobic010G267200 Sobic009G150500 Sobic009G150500 Sobic001G232200--Sobic009G150500 Sobic005G224300 Sobic005G224300 Sobic001G232200--Sobic005G224300 Sobic001G232200--Sobic005G202300 Sobic003G353200 Sobic003G353200 Sobic001G232200--Sobic003G353200 Sobic003G280000 Sobic003G280000 Sobic001G232200--Sobic003G280000 Sobic001G232200--Sobic002G228800 Sobic006G092700 Sobic006G092700 Sobic006G003600--Sobic006G092700 Sobic010G028100 Sobic010G028100 Sobic006G003600--Sobic010G028100 Sobic010G082000 Sobic010G082000 Sobic006G003600--Sobic010G082000 Sobic008G164450 Sobic008G164450 Sobic006G003600--Sobic008G164450 Sobic006G003600--Sobic004G119800 Sobic006G135300 Sobic006G135300 Sobic006G003600--Sobic006G135300 Sobic001G360500 Sobic001G360500 Sobic006G003600--Sobic001G360500 Sobic004G333000 Sobic004G333000 Sobic006G003600--Sobic004G333000 Sobic002G146000 Sobic002G146000 Sobic006G003600--Sobic002G146000 Sobic010G152400 Sobic010G152400 Sobic003G000100--Sobic010G152400 Sobic004G322100 Sobic004G322100 Sobic003G000100--Sobic004G322100 Sobic006G003100 Sobic006G003100 Sobic003G000100--Sobic006G003100 Sobic003G000100--Sobic004G306900 Sobic003G000100--Sobic006G092700 Sobic004G106100 Sobic004G106100 Sobic003G000100--Sobic004G106100 Sobic004G271800 Sobic004G271800 Sobic003G000100--Sobic004G271800 Sobic003G240400 Sobic003G240400 Sobic003G000100--Sobic003G240400 Sobic007G086300 Sobic007G086300 Sobic003G000100--Sobic007G086300 Sobic002G042200 Sobic002G042200 Sobic003G351600--Sobic002G042200 Sobic007G050200 Sobic007G050200 Sobic003G351600--Sobic007G050200 Sobic004G139300 Sobic004G139300 Sobic003G351600--Sobic004G139300 Sobic006G256900 Sobic006G256900 Sobic003G351600--Sobic006G256900 Sobic003G351600--Sobic001G058300 Sobic010G113100 Sobic010G113100 Sobic003G351600--Sobic010G113100 Sobic003G351600--Sobic004G322100 Sobic003G351600--Sobic002G216100 Sobic002G101400 Sobic002G101400 Sobic003G351600--Sobic002G101400 Sobic005G166700--Sobic001G232200 Sobic007G008600 Sobic007G008600 Sobic005G166700--Sobic007G008600 Sobic005G166700--Sobic009G150500 Sobic005G166700--Sobic003G280000 Sobic005G166700--Sobic006G106900 Sobic005G166700--Sobic003G353200 Sobic005G166700--Sobic006G103300 Sobic003G257400 Sobic003G257400 Sobic005G166700--Sobic003G257400 Sobic005G166700--Sobic005G202300 Sobic002G216100--Sobic004G139300 Sobic002G404100 Sobic002G404100 Sobic002G216100--Sobic002G404100 Sobic007G178900 Sobic007G178900 Sobic002G216100--Sobic007G178900 Sobic002G216100--Sobic010G113100 Sobic007G176000 Sobic007G176000 Sobic002G216100--Sobic007G176000 Sobic002G185800 Sobic002G185800 Sobic002G216100--Sobic002G185800 Sobic002G216100--Sobic001G360500 Sobic005G046700 Sobic005G046700 Sobic002G216100--Sobic005G046700 Sobic002G216100--Sobic002G042200
Octagon: transcription factors


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