Gene annotation
Transcriptome id Sobic.001G232200.1
Synonym Sb01g020350
Functional annotation glycine-rich cell wall structural protein 2 precursor, putative, expressed
UniProt C5WZJ2
Pfam -
Panther DB PTHR33548 PTHR33548:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g31540.1 : glycine-rich cell wall structural protein 2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a006741
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G166700 sulfotransferase domain containing protein, expressed -
2 Sobic.001G487800 expressed protein -
3 Sobic.010G267200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD40-like Beta Propeller Repeat family protein, expressed -
4 Sobic.009G150500 expressed protein -
5 Sobic.005G224300 O-methyltransferase, putative, expressed -
6 Sobic.005G202300 integral membrane protein TIGR01569 containing protein, expressed -
7 Sobic.003G353200 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Laccase 2 LAC2 (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
8 Sobic.003G280000 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.002G228800 expressed protein -
10 Sobic.009G162300 similar to Putative laccase-11(PubMedID : 29862293)@Laccase LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
11 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
12 Sobic.004G083500 O-methyltransferase, putative, expressed -
13 Sobic.010G028100 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
14 Sobic.001G351500 ICE-like protease p20 domain containing protein, putative, expressed -
15 Sobic.010G168400 ferroportin1 domain containing protein, expressed K14685: SLC40A1, solute carrier family 40 (iron-regulated transporter), member 1
16 Sobic.005G080400 1-aminocyclopropane-1-carboxylate oxidase 2, putative, expressed -
17 Sobic.006G174300 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
18 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
19 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
20 Sobic.002G080200 receptor protein kinase, putative, expressed -


Gene co-expression network
sample Sobic001G232200 Sobic001G232200 Sobic005G166700 Sobic005G166700 Sobic001G232200--Sobic005G166700 Sobic001G487800 Sobic001G487800 Sobic001G232200--Sobic001G487800 Sobic010G267200 Sobic010G267200 Sobic001G232200--Sobic010G267200 Sobic009G150500 Sobic009G150500 Sobic001G232200--Sobic009G150500 Sobic005G224300 Sobic005G224300 Sobic001G232200--Sobic005G224300 Sobic005G202300 Sobic005G202300 Sobic001G232200--Sobic005G202300 Sobic003G353200 Sobic003G353200 Sobic001G232200--Sobic003G353200 Sobic003G280000 Sobic003G280000 Sobic001G232200--Sobic003G280000 Sobic002G228800 Sobic002G228800 Sobic001G232200--Sobic002G228800 Sobic005G166700--Sobic001G232200 Sobic007G008600 Sobic007G008600 Sobic005G166700--Sobic007G008600 Sobic005G166700--Sobic009G150500 Sobic005G166700--Sobic003G280000 Sobic006G106900 Sobic006G106900 Sobic005G166700--Sobic006G106900 Sobic005G166700--Sobic003G353200 Sobic006G103300 Sobic006G103300 Sobic005G166700--Sobic006G103300 Sobic003G257400 Sobic003G257400 Sobic005G166700--Sobic003G257400 Sobic005G166700--Sobic005G202300 Sobic001G487800--Sobic001G232200 Sobic001G487800--Sobic005G202300 Sobic010G168400 Sobic010G168400 Sobic001G487800--Sobic010G168400 Sobic003G282200 Sobic003G282200 Sobic001G487800--Sobic003G282200 Sobic001G058300 Sobic001G058300 Sobic001G487800--Sobic001G058300 Sobic001G487800--Sobic002G228800 Sobic006G003600 Sobic006G003600 Sobic001G487800--Sobic006G003600 Sobic004G119800 Sobic004G119800 Sobic001G487800--Sobic004G119800 Sobic001G487800--Sobic010G267200 Sobic010G267200--Sobic005G202300 Sobic010G267200--Sobic001G232200 Sobic006G174300 Sobic006G174300 Sobic010G267200--Sobic006G174300 Sobic003G319400 Sobic003G319400 Sobic010G267200--Sobic003G319400 Sobic010G267200--Sobic001G058300 Sobic010G267200--Sobic006G106900 Sobic010G267200--Sobic003G353200 Sobic009G181600 Sobic009G181600 Sobic010G267200--Sobic009G181600 Sobic010G267200--Sobic003G280000 Sobic009G150500--Sobic005G166700 Sobic004G029100 Sobic004G029100 Sobic009G150500--Sobic004G029100 Sobic008G016000 Sobic008G016000 Sobic009G150500--Sobic008G016000 Sobic009G150500--Sobic001G232200 Sobic009G150500--Sobic007G008600 Sobic010G028100 Sobic010G028100 Sobic009G150500--Sobic010G028100 Sobic009G052800 Sobic009G052800 Sobic009G150500--Sobic009G052800 Sobic009G150500--Sobic006G103300 Sobic002G183700 Sobic002G183700 Sobic009G150500--Sobic002G183700 Sobic009G071300 Sobic009G071300 Sobic005G224300--Sobic009G071300 Sobic005G224300--Sobic001G232200 Sobic001G351500 Sobic001G351500 Sobic005G224300--Sobic001G351500 Sobic003G266300 Sobic003G266300 Sobic005G224300--Sobic003G266300 Sobic005G046801 Sobic005G046801 Sobic005G224300--Sobic005G046801 Sobic005G224300--Sobic001G487800 Sobic001G018600 Sobic001G018600 Sobic005G224300--Sobic001G018600 Sobic001G232400 Sobic001G232400 Sobic005G224300--Sobic001G232400 Sobic007G066824 Sobic007G066824 Sobic005G224300--Sobic007G066824 Sobic005G202300--Sobic006G106900 Sobic005G202300--Sobic003G319400 Sobic005G202300--Sobic003G280000 Sobic005G202300--Sobic009G181600 Sobic003G053200 Sobic003G053200 Sobic005G202300--Sobic003G053200 Sobic010G031700 Sobic010G031700 Sobic005G202300--Sobic010G031700 Sobic005G202300--Sobic003G353200 Sobic004G029400 Sobic004G029400 Sobic005G202300--Sobic004G029400 Sobic005G202300--Sobic001G058300 Sobic007G037600 Sobic007G037600 Sobic003G353200--Sobic007G037600 Sobic003G353200--Sobic003G280000 Sobic002G146000 Sobic002G146000 Sobic003G353200--Sobic002G146000 Sobic003G353200--Sobic010G031700 Sobic003G353200--Sobic005G202300 Sobic003G053600 Sobic003G053600 Sobic003G353200--Sobic003G053600 Sobic003G353200--Sobic006G106900 Sobic001G218400 Sobic001G218400 Sobic003G353200--Sobic001G218400 Sobic009G162300 Sobic009G162300 Sobic003G353200--Sobic009G162300 Sobic003G280000--Sobic005G202300 Sobic003G280000--Sobic003G353200 Sobic003G280000--Sobic006G106900 Sobic003G280000--Sobic003G319400 Sobic003G280000--Sobic010G031700 Sobic003G280000--Sobic003G053200 Sobic003G280000--Sobic003G257400 Sobic003G280000--Sobic009G181600 Sobic003G280000--Sobic001G218400 Sobic005G080400 Sobic005G080400 Sobic002G228800--Sobic005G080400 Sobic002G228800--Sobic001G058300 Sobic007G021900 Sobic007G021900 Sobic002G228800--Sobic007G021900 Sobic002G228800--Sobic001G232200 Sobic002G228800--Sobic006G003600 Sobic003G000100 Sobic003G000100 Sobic002G228800--Sobic003G000100 Sobic003G351600 Sobic003G351600 Sobic002G228800--Sobic003G351600 Sobic002G228800--Sobic005G166700 Sobic002G216100 Sobic002G216100 Sobic002G228800--Sobic002G216100
Octagon: transcription factors


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