Gene annotation
Transcriptome id Sobic.004G083500.1
Synonym Sb04g006885
Functional annotation O-methyltransferase, putative, expressed
UniProt A0A194YPI3
Pfam PF08100 PF00891
Panther DB PTHR11746 PTHR11746:SF85
NCBI CDD KOG3178; Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases
KEGG Orthology -
Gene Ontology GO:0008171; O-methyltransferase activity


Orthologs (automatic annotation)
TAIR AT4G35160 : O-methyltransferase family protein
RAP-DB (Rice) LOC_Os08g19420.1 : O-methyltransferase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G353200 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Laccase 2 LAC2 (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
2 Sobic.001G182200 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.003G167300 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.001G319300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
5 Sobic.002G377700 caltractin, putative, expressed -
6 Sobic.003G064800 dirigent, putative, expressed -
7 Sobic.003G319400 receptor protein kinase, putative, expressed -
8 Sobic.009G186500 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.003G257400 "BG3(Ortholog in rice:Xiao et al., 20018)"(PubMedID : 31659870)@purine permease, putative, expressed -
10 Sobic.001G438200 expressed protein -
11 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -
12 Sobic.010G168400 ferroportin1 domain containing protein, expressed K14685: SLC40A1, solute carrier family 40 (iron-regulated transporter), member 1
13 Sobic.008G022100 nucleoside-triphosphatase, putative, expressed K14641: apyrase
14 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
15 Sobic.003G280000 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.010G031700 thaumatin, putative, expressed -
17 Sobic.005G202300 integral membrane protein TIGR01569 containing protein, expressed -
18 Sobic.007G037600 C4-dicarboxylate transporter/malic acid transport protein, expressed -
19 Sobic.002G255000 AIR12, putative, expressed -
20 Sobic.001G238000 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic004G083500 Sobic004G083500 Sobic003G353200 Sobic003G353200 Sobic004G083500--Sobic003G353200 Sobic001G182200 Sobic001G182200 Sobic004G083500--Sobic001G182200 Sobic003G167300 Sobic003G167300 Sobic004G083500--Sobic003G167300 Sobic001G319300 Sobic001G319300 Sobic004G083500--Sobic001G319300 Sobic002G377700 Sobic002G377700 Sobic004G083500--Sobic002G377700 Sobic003G064800 Sobic003G064800 Sobic004G083500--Sobic003G064800 Sobic003G319400 Sobic003G319400 Sobic004G083500--Sobic003G319400 Sobic009G186500 Sobic009G186500 Sobic004G083500--Sobic009G186500 Sobic003G257400 Sobic003G257400 Sobic004G083500--Sobic003G257400 Sobic007G037600 Sobic007G037600 Sobic003G353200--Sobic007G037600 Sobic003G280000 Sobic003G280000 Sobic003G353200--Sobic003G280000 Sobic002G146000 Sobic002G146000 Sobic003G353200--Sobic002G146000 Sobic010G031700 Sobic010G031700 Sobic003G353200--Sobic010G031700 Sobic005G202300 Sobic005G202300 Sobic003G353200--Sobic005G202300 Sobic003G053600 Sobic003G053600 Sobic003G353200--Sobic003G053600 Sobic006G106900 Sobic006G106900 Sobic003G353200--Sobic006G106900 Sobic001G218400 Sobic001G218400 Sobic003G353200--Sobic001G218400 Sobic009G162300 Sobic009G162300 Sobic003G353200--Sobic009G162300 Sobic001G182200--Sobic001G319300 Sobic008G034900 Sobic008G034900 Sobic001G182200--Sobic008G034900 Sobic002G068000 Sobic002G068000 Sobic001G182200--Sobic002G068000 Sobic001G216500 Sobic001G216500 Sobic001G182200--Sobic001G216500 Sobic001G182200--Sobic004G083500 Sobic009G219200 Sobic009G219200 Sobic001G182200--Sobic009G219200 Sobic010G162800 Sobic010G162800 Sobic001G182200--Sobic010G162800 Sobic001G182200--Sobic003G064800 Sobic010G168400 Sobic010G168400 Sobic001G182200--Sobic010G168400 Sobic001G499900 Sobic001G499900 Sobic003G167300--Sobic001G499900 Sobic006G205700 Sobic006G205700 Sobic003G167300--Sobic006G205700 Sobic008G022100 Sobic008G022100 Sobic003G167300--Sobic008G022100 Sobic009G065700 Sobic009G065700 Sobic003G167300--Sobic009G065700 Sobic003G441800 Sobic003G441800 Sobic003G167300--Sobic003G441800 Sobic002G391400 Sobic002G391400 Sobic003G167300--Sobic002G391400 Sobic010G241900 Sobic010G241900 Sobic003G167300--Sobic010G241900 Sobic001G348400 Sobic001G348400 Sobic003G167300--Sobic001G348400 Sobic003G095100 Sobic003G095100 Sobic003G167300--Sobic003G095100 Sobic001G319300--Sobic009G186500 Sobic007G086300 Sobic007G086300 Sobic001G319300--Sobic007G086300 Sobic002G255000 Sobic002G255000 Sobic001G319300--Sobic002G255000 Sobic001G319300--Sobic008G034900 Sobic004G110200 Sobic004G110200 Sobic001G319300--Sobic004G110200 Sobic001G319300--Sobic003G064800 Sobic002G392100 Sobic002G392100 Sobic001G319300--Sobic002G392100 Sobic003G400900 Sobic003G400900 Sobic001G319300--Sobic003G400900 Sobic001G319300--Sobic001G182200 Sobic001G238000 Sobic001G238000 Sobic002G377700--Sobic001G238000 Sobic001G238200 Sobic001G238200 Sobic002G377700--Sobic001G238200 Sobic006G174300 Sobic006G174300 Sobic002G377700--Sobic006G174300 Sobic001G058300 Sobic001G058300 Sobic002G377700--Sobic001G058300 Sobic002G377700--Sobic010G162800 Sobic002G377700--Sobic003G319400 Sobic002G377700--Sobic009G219200 Sobic004G306900 Sobic004G306900 Sobic002G377700--Sobic004G306900 Sobic006G079300 Sobic006G079300 Sobic002G377700--Sobic006G079300 Sobic005G127400 Sobic005G127400 Sobic003G064800--Sobic005G127400 Sobic003G064800--Sobic002G255000 Sobic003G064800--Sobic004G306900 Sobic001G438200 Sobic001G438200 Sobic003G064800--Sobic001G438200 Sobic003G064800--Sobic006G106900 Sobic003G064800--Sobic001G238200 Sobic003G140700 Sobic003G140700 Sobic003G064800--Sobic003G140700 Sobic003G064800--Sobic007G086300 Sobic010G234500 Sobic010G234500 Sobic003G064800--Sobic010G234500 Sobic003G319400--Sobic006G106900 Sobic003G319400--Sobic005G202300 Sobic003G319400--Sobic004G306900 Sobic003G319400--Sobic001G438200 Sobic009G181600 Sobic009G181600 Sobic003G319400--Sobic009G181600 Sobic003G319400--Sobic007G086300 Sobic003G282200 Sobic003G282200 Sobic003G319400--Sobic003G282200 Sobic003G319400--Sobic003G064800 Sobic003G319400--Sobic003G280000 Sobic006G225500 Sobic006G225500 Sobic009G186500--Sobic006G225500 Sobic009G186500--Sobic002G255000 Sobic009G186500--Sobic001G319300 Sobic009G186500--Sobic005G127400 Sobic009G186500--Sobic010G234500 Sobic009G186500--Sobic003G064800 Sobic009G186500--Sobic003G140700 Sobic009G186500--Sobic001G238200 Sobic003G349400 Sobic003G349400 Sobic009G186500--Sobic003G349400 Sobic003G000100 Sobic003G000100 Sobic003G257400--Sobic003G000100 Sobic003G257400--Sobic007G086300 Sobic004G106100 Sobic004G106100 Sobic003G257400--Sobic004G106100 Sobic003G257400--Sobic006G106900 Sobic001G414800 Sobic001G414800 Sobic003G257400--Sobic001G414800 Sobic003G257400--Sobic003G353200 Sobic003G257400--Sobic003G280000 Sobic006G003100 Sobic006G003100 Sobic003G257400--Sobic006G003100 Sobic003G257400--Sobic004G306900
Octagon: transcription factors


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