Gene annotation
Transcriptome id Sobic.001G182200.1
Synonym
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt A0A1B6QJL8
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF150
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT5G55050 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os03g38470.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G319300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.008G034900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
3 Sobic.002G068000 expressed protein -
4 Sobic.001G216500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@nodulin, putative, expressed K07192: flotillin
5 Sobic.004G083500 O-methyltransferase, putative, expressed -
6 Sobic.009G219200 expressed protein -
7 Sobic.010G162800 reticuline oxidase-like protein precursor, putative, expressed -
8 Sobic.003G064800 dirigent, putative, expressed -
9 Sobic.010G168400 ferroportin1 domain containing protein, expressed K14685: SLC40A1, solute carrier family 40 (iron-regulated transporter), member 1
10 Sobic.002G255000 AIR12, putative, expressed -
11 Sobic.004G110200 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.003G167300 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.009G032900 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.001G237800 expansin precursor, putative, expressed -
15 Sobic.002G392100 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.009G186500 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -
18 Sobic.001G438200 expressed protein -
19 Sobic.004G306900 amino acid transporter, putative, expressed -
20 Sobic.003G349400 expressed protein -


Gene co-expression network
sample Sobic001G182200 Sobic001G182200 Sobic001G319300 Sobic001G319300 Sobic001G182200--Sobic001G319300 Sobic008G034900 Sobic008G034900 Sobic001G182200--Sobic008G034900 Sobic002G068000 Sobic002G068000 Sobic001G182200--Sobic002G068000 Sobic001G216500 Sobic001G216500 Sobic001G182200--Sobic001G216500 Sobic004G083500 Sobic004G083500 Sobic001G182200--Sobic004G083500 Sobic009G219200 Sobic009G219200 Sobic001G182200--Sobic009G219200 Sobic010G162800 Sobic010G162800 Sobic001G182200--Sobic010G162800 Sobic003G064800 Sobic003G064800 Sobic001G182200--Sobic003G064800 Sobic010G168400 Sobic010G168400 Sobic001G182200--Sobic010G168400 Sobic009G186500 Sobic009G186500 Sobic001G319300--Sobic009G186500 Sobic007G086300 Sobic007G086300 Sobic001G319300--Sobic007G086300 Sobic002G255000 Sobic002G255000 Sobic001G319300--Sobic002G255000 Sobic001G319300--Sobic008G034900 Sobic004G110200 Sobic004G110200 Sobic001G319300--Sobic004G110200 Sobic001G319300--Sobic003G064800 Sobic002G392100 Sobic002G392100 Sobic001G319300--Sobic002G392100 Sobic003G400900 Sobic003G400900 Sobic001G319300--Sobic003G400900 Sobic001G319300--Sobic001G182200 Sobic008G034900--Sobic007G086300 Sobic008G034900--Sobic002G392100 Sobic009G065800 Sobic009G065800 Sobic008G034900--Sobic009G065800 Sobic008G034900--Sobic001G319300 Sobic008G020000 Sobic008G020000 Sobic008G034900--Sobic008G020000 Sobic008G022100 Sobic008G022100 Sobic008G034900--Sobic008G022100 Sobic008G034900--Sobic003G064800 Sobic003G167300 Sobic003G167300 Sobic008G034900--Sobic003G167300 Sobic008G034900--Sobic002G068000 Sobic009G032900 Sobic009G032900 Sobic002G068000--Sobic009G032900 Sobic003G349400 Sobic003G349400 Sobic002G068000--Sobic003G349400 Sobic010G158400 Sobic010G158400 Sobic002G068000--Sobic010G158400 Sobic010G234500 Sobic010G234500 Sobic002G068000--Sobic010G234500 Sobic005G080600 Sobic005G080600 Sobic002G068000--Sobic005G080600 Sobic009G259800 Sobic009G259800 Sobic002G068000--Sobic009G259800 Sobic003G426500 Sobic003G426500 Sobic002G068000--Sobic003G426500 Sobic005G216700 Sobic005G216700 Sobic002G068000--Sobic005G216700 Sobic010G066800 Sobic010G066800 Sobic002G068000--Sobic010G066800 Sobic001G216500--Sobic002G392100 Sobic007G206800 Sobic007G206800 Sobic001G216500--Sobic007G206800 Sobic001G216500--Sobic005G080600 Sobic002G391400 Sobic002G391400 Sobic001G216500--Sobic002G391400 Sobic001G216500--Sobic001G319300 Sobic001G216500--Sobic005G216700 Sobic001G216500--Sobic002G068000 Sobic001G216500--Sobic001G182200 Sobic006G205700 Sobic006G205700 Sobic001G216500--Sobic006G205700 Sobic003G353200 Sobic003G353200 Sobic004G083500--Sobic003G353200 Sobic004G083500--Sobic001G182200 Sobic004G083500--Sobic003G167300 Sobic004G083500--Sobic001G319300 Sobic002G377700 Sobic002G377700 Sobic004G083500--Sobic002G377700 Sobic004G083500--Sobic003G064800 Sobic003G319400 Sobic003G319400 Sobic004G083500--Sobic003G319400 Sobic004G083500--Sobic009G186500 Sobic003G257400 Sobic003G257400 Sobic004G083500--Sobic003G257400 Sobic003G140700 Sobic003G140700 Sobic009G219200--Sobic003G140700 Sobic001G438200 Sobic001G438200 Sobic009G219200--Sobic001G438200 Sobic001G237800 Sobic001G237800 Sobic009G219200--Sobic001G237800 Sobic009G219200--Sobic002G255000 Sobic009G219200--Sobic003G064800 Sobic004G306900 Sobic004G306900 Sobic009G219200--Sobic004G306900 Sobic006G079300 Sobic006G079300 Sobic009G219200--Sobic006G079300 Sobic001G238000 Sobic001G238000 Sobic009G219200--Sobic001G238000 Sobic001G238200 Sobic001G238200 Sobic009G219200--Sobic001G238200 Sobic010G162800--Sobic001G237800 Sobic010G162800--Sobic001G238000 Sobic010G162800--Sobic003G064800 Sobic010G162800--Sobic001G238200 Sobic010G162800--Sobic010G234500 Sobic010G162800--Sobic009G219200 Sobic005G127400 Sobic005G127400 Sobic010G162800--Sobic005G127400 Sobic010G162800--Sobic003G349400 Sobic010G162800--Sobic004G306900 Sobic003G064800--Sobic005G127400 Sobic003G064800--Sobic002G255000 Sobic003G064800--Sobic004G306900 Sobic003G064800--Sobic001G438200 Sobic006G106900 Sobic006G106900 Sobic003G064800--Sobic006G106900 Sobic003G064800--Sobic001G238200 Sobic003G064800--Sobic003G140700 Sobic003G064800--Sobic007G086300 Sobic003G064800--Sobic010G234500 Sobic001G209300 Sobic001G209300 Sobic010G168400--Sobic001G209300 Sobic004G119800 Sobic004G119800 Sobic010G168400--Sobic004G119800 Sobic002G195600 Sobic002G195600 Sobic010G168400--Sobic002G195600 Sobic010G168400--Sobic001G182200 Sobic010G168400--Sobic005G080600 Sobic010G241800 Sobic010G241800 Sobic010G168400--Sobic010G241800 Sobic005G067300 Sobic005G067300 Sobic010G168400--Sobic005G067300 Sobic010G168400--Sobic004G083500 Sobic006G196400 Sobic006G196400 Sobic010G168400--Sobic006G196400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.