Gene annotation
Transcriptome id Sobic.001G216500.1
Synonym Sb01g019070
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
nodulin, putative, expressed
UniProt C5WYC7
Pfam PF01145
Panther DB PTHR13806 PTHR13806:SF23
NCBI CDD KOG2668; Flotillins
KEGG Orthology K07192; flotillin
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G25260 : SPFH/Band 7/PHB domain-containing membrane-associated protein family
RAP-DB (Rice) LOC_Os10g34040.1 : nodulin, putative, expressed
MaizeGDB (Corn) Zm00025a017598
Brachypodium KQJ97143 , KQJ97142 , KQJ97144
Barley HORVU1Hr1G042180.1 , HORVU1Hr1G042180.2 , HORVU0Hr1G012100.1 , HORVU6Hr1G027930.2 , HORVU6Hr1G027930.1 , HORVU5Hr1G078930.1 , HORVU5Hr1G078930.2 , HORVU5Hr1G078930.3 , HORVU5Hr1G078930.4
Wheat TraesCS1B02G174900 , TraesCS1D02G156300 , TraesCS5A02G301900 , TraesCS3B02G584800 , TraesCS5B02G299800 , TraesCS5D02G306900 , TraesCS6B02G170400 , TraesCS5B02G300400 , TraesCS5D02G307500 , TraesCS3A02G517200 , TraesCS5A02G300700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G392100 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
3 Sobic.005G080600 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
4 Sobic.002G391400 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.001G319300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.005G216700 plant protein of unknown function domain containing protein, expressed -
7 Sobic.002G068000 expressed protein -
8 Sobic.001G182200 GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -
10 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -
11 Sobic.002G334000 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
12 Sobic.006G196400 U-box, putative, expressed -
13 Sobic.008G034900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
14 Sobic.010G234500 O-methyltransferase, putative, expressed -
15 Sobic.009G032900 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.003G167300 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
18 Sobic.005G217766 - -
19 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G216500 Sobic001G216500 Sobic002G392100 Sobic002G392100 Sobic001G216500--Sobic002G392100 Sobic007G206800 Sobic007G206800 Sobic001G216500--Sobic007G206800 Sobic005G080600 Sobic005G080600 Sobic001G216500--Sobic005G080600 Sobic002G391400 Sobic002G391400 Sobic001G216500--Sobic002G391400 Sobic001G319300 Sobic001G319300 Sobic001G216500--Sobic001G319300 Sobic005G216700 Sobic005G216700 Sobic001G216500--Sobic005G216700 Sobic002G068000 Sobic002G068000 Sobic001G216500--Sobic002G068000 Sobic001G182200 Sobic001G182200 Sobic001G216500--Sobic001G182200 Sobic006G205700 Sobic006G205700 Sobic001G216500--Sobic006G205700 Sobic002G392100--Sobic002G391400 Sobic002G392100--Sobic007G206800 Sobic002G334000 Sobic002G334000 Sobic002G392100--Sobic002G334000 Sobic007G086300 Sobic007G086300 Sobic002G392100--Sobic007G086300 Sobic002G392100--Sobic006G205700 Sobic008G034900 Sobic008G034900 Sobic002G392100--Sobic008G034900 Sobic003G167300 Sobic003G167300 Sobic002G392100--Sobic003G167300 Sobic010G241900 Sobic010G241900 Sobic002G392100--Sobic010G241900 Sobic001G499900 Sobic001G499900 Sobic002G392100--Sobic001G499900 Sobic007G206800--Sobic002G391400 Sobic007G206800--Sobic002G334000 Sobic007G220400 Sobic007G220400 Sobic007G206800--Sobic007G220400 Sobic007G206800--Sobic010G241900 Sobic010G191700 Sobic010G191700 Sobic007G206800--Sobic010G191700 Sobic007G206800--Sobic006G205700 Sobic007G206800--Sobic005G080600 Sobic002G111900 Sobic002G111900 Sobic007G206800--Sobic002G111900 Sobic007G206800--Sobic002G392100 Sobic005G080600--Sobic007G206800 Sobic006G196400 Sobic006G196400 Sobic005G080600--Sobic006G196400 Sobic005G080600--Sobic007G220400 Sobic005G080600--Sobic002G391400 Sobic009G259800 Sobic009G259800 Sobic005G080600--Sobic009G259800 Sobic004G119800 Sobic004G119800 Sobic005G080600--Sobic004G119800 Sobic005G080600--Sobic002G334000 Sobic005G080600--Sobic002G068000 Sobic005G080600--Sobic010G241900 Sobic002G391400--Sobic007G206800 Sobic002G391400--Sobic010G241900 Sobic002G391400--Sobic006G205700 Sobic002G391400--Sobic010G191700 Sobic002G391400--Sobic007G220400 Sobic002G391400--Sobic002G334000 Sobic002G391400--Sobic002G392100 Sobic002G391400--Sobic002G111900 Sobic010G191600 Sobic010G191600 Sobic002G391400--Sobic010G191600 Sobic009G186500 Sobic009G186500 Sobic001G319300--Sobic009G186500 Sobic001G319300--Sobic007G086300 Sobic002G255000 Sobic002G255000 Sobic001G319300--Sobic002G255000 Sobic001G319300--Sobic008G034900 Sobic004G110200 Sobic004G110200 Sobic001G319300--Sobic004G110200 Sobic003G064800 Sobic003G064800 Sobic001G319300--Sobic003G064800 Sobic001G319300--Sobic002G392100 Sobic003G400900 Sobic003G400900 Sobic001G319300--Sobic003G400900 Sobic001G319300--Sobic001G182200 Sobic004G351200 Sobic004G351200 Sobic005G216700--Sobic004G351200 Sobic009G032900 Sobic009G032900 Sobic005G216700--Sobic009G032900 Sobic010G139100 Sobic010G139100 Sobic005G216700--Sobic010G139100 Sobic005G216700--Sobic002G068000 Sobic005G216700--Sobic002G334000 Sobic005G216700--Sobic007G206800 Sobic010G158400 Sobic010G158400 Sobic005G216700--Sobic010G158400 Sobic005G216700--Sobic005G080600 Sobic003G046700 Sobic003G046700 Sobic005G216700--Sobic003G046700 Sobic002G068000--Sobic009G032900 Sobic003G349400 Sobic003G349400 Sobic002G068000--Sobic003G349400 Sobic002G068000--Sobic010G158400 Sobic010G234500 Sobic010G234500 Sobic002G068000--Sobic010G234500 Sobic002G068000--Sobic005G080600 Sobic002G068000--Sobic009G259800 Sobic003G426500 Sobic003G426500 Sobic002G068000--Sobic003G426500 Sobic002G068000--Sobic005G216700 Sobic010G066800 Sobic010G066800 Sobic002G068000--Sobic010G066800 Sobic001G182200--Sobic001G319300 Sobic001G182200--Sobic008G034900 Sobic001G182200--Sobic002G068000 Sobic001G182200--Sobic001G216500 Sobic004G083500 Sobic004G083500 Sobic001G182200--Sobic004G083500 Sobic009G219200 Sobic009G219200 Sobic001G182200--Sobic009G219200 Sobic010G162800 Sobic010G162800 Sobic001G182200--Sobic010G162800 Sobic001G182200--Sobic003G064800 Sobic010G168400 Sobic010G168400 Sobic001G182200--Sobic010G168400 Sobic006G205700--Sobic002G391400 Sobic003G441800 Sobic003G441800 Sobic006G205700--Sobic003G441800 Sobic004G106100 Sobic004G106100 Sobic006G205700--Sobic004G106100 Sobic006G205700--Sobic003G167300 Sobic006G205700--Sobic010G241900 Sobic005G046400 Sobic005G046400 Sobic006G205700--Sobic005G046400 Sobic006G205700--Sobic007G206800 Sobic003G441601 Sobic003G441601 Sobic006G205700--Sobic003G441601 Sobic003G095100 Sobic003G095100 Sobic006G205700--Sobic003G095100
Octagon: transcription factors


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