Gene annotation
Transcriptome id Sobic.010G031700.1
Synonym Sb10g002870
Functional annotation thaumatin, putative, expressed
UniProt C5Z3T8
Pfam PF00314
Panther DB PTHR31048:SF3 PTHR31048
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G36010 : Pathogenesis-related thaumatin superfamily protein
RAP-DB (Rice) LOC_Os10g05660.1 : thaumatin, putative, expressed
MaizeGDB (Corn) Zm00025a051051 , Zm00025a043524 , Zm00025a049345 , Zm00025a018494 , Zm00025a034213 , Zm00025a003787 , Zm00025a003782
Brachypodium KQJ91229
Barley HORVU7Hr1G057350.4 , HORVU7Hr1G057350.1 , HORVU7Hr1G057350.3 , HORVU7Hr1G057350.2 , HORVU2Hr1G034010.1 , HORVU2Hr1G034010.2 , HORVU2Hr1G034010.3 , HORVU5Hr1G112160.8 , HORVU5Hr1G112160.4 , HORVU5Hr1G112160.6 , HORVU5Hr1G112160.7 , HORVU5Hr1G112160.1 , HORVU5Hr1G112160.2 , HORVU5Hr1G112160.3 , HORVU5Hr1G083260.2 , HORVU5Hr1G083260.3 , HORVU5Hr1G083260.1 , HORVU5Hr1G083240.4 , HORVU5Hr1G083240.1 , HORVU5Hr1G083240.2 , HORVU5Hr1G083240.3 , HORVU5Hr1G112160.5
Wheat TraesCS7D02G272100 , TraesCS5D02G334300 , TraesCS5A02G472800 , TraesCS7B02G170200 , TraesCS5D02G485500 , TraesCS7A02G271800 , TraesCS2B02G207200 , TraesCS4B02G226800 , TraesCS2D02G188700 , TraesCS2A02G180000 , TraesCS2A02G180000 , TraesCS5B02G328500 , TraesCS5B02G485700 , TraesCS5A02G328500 , TraesCS5D02G334400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G053200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.007G037600 C4-dicarboxylate transporter/malic acid transport protein, expressed -
3 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
4 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.004G029400 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
6 Sobic.006G003100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1295 domain containing protein, putative, expressed -
7 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -
8 Sobic.002G233200 plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.003G353200 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Laccase 2 LAC2 (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
10 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
11 Sobic.005G202300 integral membrane protein TIGR01569 containing protein, expressed -
12 Sobic.002G146000 "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
13 Sobic.003G282300 POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
14 Sobic.003G319400 receptor protein kinase, putative, expressed -
15 Sobic.003G280000 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.004G121600 expansin precursor, putative, expressed -
17 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -
18 Sobic.003G095100 glycosyltransferase protein, putative, expressed -
19 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
20 Sobic.009G181600 indole-3-acetate beta-glucosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic010G031700 Sobic010G031700 Sobic003G053200 Sobic003G053200 Sobic010G031700--Sobic003G053200 Sobic007G037600 Sobic007G037600 Sobic010G031700--Sobic007G037600 Sobic003G441800 Sobic003G441800 Sobic010G031700--Sobic003G441800 Sobic004G106100 Sobic004G106100 Sobic010G031700--Sobic004G106100 Sobic004G029400 Sobic004G029400 Sobic010G031700--Sobic004G029400 Sobic006G003100 Sobic006G003100 Sobic010G031700--Sobic006G003100 Sobic006G205700 Sobic006G205700 Sobic010G031700--Sobic006G205700 Sobic002G233200 Sobic002G233200 Sobic010G031700--Sobic002G233200 Sobic003G353200 Sobic003G353200 Sobic010G031700--Sobic003G353200 Sobic003G053200--Sobic003G441800 Sobic003G441700 Sobic003G441700 Sobic003G053200--Sobic003G441700 Sobic001G301000 Sobic001G301000 Sobic003G053200--Sobic001G301000 Sobic004G121600 Sobic004G121600 Sobic003G053200--Sobic004G121600 Sobic003G053200--Sobic010G031700 Sobic005G119900 Sobic005G119900 Sobic003G053200--Sobic005G119900 Sobic003G053200--Sobic004G029400 Sobic001G231800 Sobic001G231800 Sobic003G053200--Sobic001G231800 Sobic003G053200--Sobic007G037600 Sobic007G037600--Sobic003G441800 Sobic007G037600--Sobic003G353200 Sobic007G037600--Sobic010G031700 Sobic002G146000 Sobic002G146000 Sobic007G037600--Sobic002G146000 Sobic007G037600--Sobic003G053200 Sobic007G037600--Sobic004G029400 Sobic001G181600 Sobic001G181600 Sobic007G037600--Sobic001G181600 Sobic007G037600--Sobic001G301000 Sobic007G037600--Sobic006G205700 Sobic003G441800--Sobic003G053200 Sobic003G441800--Sobic003G441700 Sobic003G441601 Sobic003G441601 Sobic003G441800--Sobic003G441601 Sobic005G046400 Sobic005G046400 Sobic003G441800--Sobic005G046400 Sobic003G441800--Sobic006G205700 Sobic003G441800--Sobic004G121600 Sobic003G441800--Sobic005G119900 Sobic003G441800--Sobic007G037600 Sobic009G065700 Sobic009G065700 Sobic003G441800--Sobic009G065700 Sobic007G086300 Sobic007G086300 Sobic004G106100--Sobic007G086300 Sobic004G106100--Sobic006G205700 Sobic004G306900 Sobic004G306900 Sobic004G106100--Sobic004G306900 Sobic003G000100 Sobic003G000100 Sobic004G106100--Sobic003G000100 Sobic004G106100--Sobic010G031700 Sobic003G282300 Sobic003G282300 Sobic004G106100--Sobic003G282300 Sobic002G391400 Sobic002G391400 Sobic004G106100--Sobic002G391400 Sobic004G106100--Sobic002G233200 Sobic010G152400 Sobic010G152400 Sobic004G106100--Sobic010G152400 Sobic004G029400--Sobic003G441800 Sobic004G029400--Sobic003G053200 Sobic004G029400--Sobic010G031700 Sobic004G029400--Sobic004G121600 Sobic004G029400--Sobic007G037600 Sobic001G539200 Sobic001G539200 Sobic004G029400--Sobic001G539200 Sobic009G181600 Sobic009G181600 Sobic004G029400--Sobic009G181600 Sobic004G029400--Sobic003G282300 Sobic004G029400--Sobic005G119900 Sobic006G003100--Sobic003G000100 Sobic006G003100--Sobic010G152400 Sobic006G003100--Sobic010G031700 Sobic006G003100--Sobic004G106100 Sobic006G003100--Sobic007G086300 Sobic006G003100--Sobic002G233200 Sobic004G322100 Sobic004G322100 Sobic006G003100--Sobic004G322100 Sobic006G003100--Sobic004G306900 Sobic007G158800 Sobic007G158800 Sobic006G003100--Sobic007G158800 Sobic006G205700--Sobic002G391400 Sobic006G205700--Sobic003G441800 Sobic006G205700--Sobic004G106100 Sobic003G167300 Sobic003G167300 Sobic006G205700--Sobic003G167300 Sobic010G241900 Sobic010G241900 Sobic006G205700--Sobic010G241900 Sobic006G205700--Sobic005G046400 Sobic007G206800 Sobic007G206800 Sobic006G205700--Sobic007G206800 Sobic006G205700--Sobic003G441601 Sobic003G095100 Sobic003G095100 Sobic006G205700--Sobic003G095100 Sobic002G233200--Sobic004G106100 Sobic002G233200--Sobic010G031700 Sobic002G233200--Sobic003G000100 Sobic002G233200--Sobic006G003100 Sobic002G233200--Sobic007G086300 Sobic003G240400 Sobic003G240400 Sobic002G233200--Sobic003G240400 Sobic002G233200--Sobic010G152400 Sobic002G233200--Sobic006G205700 Sobic002G233200--Sobic002G146000 Sobic003G353200--Sobic007G037600 Sobic003G280000 Sobic003G280000 Sobic003G353200--Sobic003G280000 Sobic003G353200--Sobic002G146000 Sobic003G353200--Sobic010G031700 Sobic005G202300 Sobic005G202300 Sobic003G353200--Sobic005G202300 Sobic003G053600 Sobic003G053600 Sobic003G353200--Sobic003G053600 Sobic006G106900 Sobic006G106900 Sobic003G353200--Sobic006G106900 Sobic001G218400 Sobic001G218400 Sobic003G353200--Sobic001G218400 Sobic009G162300 Sobic009G162300 Sobic003G353200--Sobic009G162300
Octagon: transcription factors


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