Gene annotation
Transcriptome id Sobic.002G101400.1
Synonym Sb02g008670
Functional annotation erythronate-4-phosphate dehydrogenase domain containing protein, expressed
UniProt A0A1B6QAA7
Pfam PF00389 PF02826
Panther DB PTHR10996 PTHR10996:SF108
NCBI CDD KOG0069; Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily)
KEGG Orthology -
Gene Ontology GO:0016616; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G72190 : D-isomer specific 2-hydroxyacid dehydrogenase family protein
RAP-DB (Rice) LOC_Os07g16040.1 : erythronate-4-phosphate dehydrogenase domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK20201 , KQK20200
Barley -
Wheat TraesCS5B02G158700 , TraesCS5B02G158700 , TraesCS5B02G158700 , TraesCS5A02G161300 , TraesCS5A02G161300 , TraesCS5D02G166200 , TraesCS5D02G166200 , TraesCS5D02G166200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G113100 cytokinin-O-glucosyltransferase 2, putative, expressed -
2 Sobic.001G360500 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.005G046700 LTPL114 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
5 Sobic.007G170300 beta,beta-carotene 9,10-dioxygenase, putative, expressed K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
6 Sobic.003G053600 hydrolase, alpha/beta fold family protein, putative, expressed -
7 Sobic.007G073000 - -
8 Sobic.007G057400 - -
9 Sobic.010G028100 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
10 Sobic.002G216100 cytochrome P450, putative, expressed -
11 Sobic.007G090472 - -
12 Sobic.006G135300 expressed protein -
13 Sobic.002G404100 annexin, putative, expressed -
14 Sobic.005G063400 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
15 Sobic.008G164450 - -
16 Sobic.007G050200 DNA binding protein, putative, expressed -
17 Sobic.004G322100 hypro1, putative, expressed -
18 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
19 Sobic.003G351600 expressed protein -
20 Sobic.002G185800 transporter, putative, expressed -


Gene co-expression network
sample Sobic002G101400 Sobic002G101400 Sobic010G113100 Sobic010G113100 Sobic002G101400--Sobic010G113100 Sobic001G360500 Sobic001G360500 Sobic002G101400--Sobic001G360500 Sobic005G046700 Sobic005G046700 Sobic002G101400--Sobic005G046700 Sobic006G092700 Sobic006G092700 Sobic002G101400--Sobic006G092700 Sobic007G170300 Sobic007G170300 Sobic002G101400--Sobic007G170300 Sobic003G053600 Sobic003G053600 Sobic002G101400--Sobic003G053600 Sobic007G073000 Sobic007G073000 Sobic002G101400--Sobic007G073000 Sobic007G057400 Sobic007G057400 Sobic002G101400--Sobic007G057400 Sobic010G028100 Sobic010G028100 Sobic002G101400--Sobic010G028100 Sobic010G113100--Sobic002G101400 Sobic010G113100--Sobic010G028100 Sobic010G113100--Sobic006G092700 Sobic008G164450 Sobic008G164450 Sobic010G113100--Sobic008G164450 Sobic006G135300 Sobic006G135300 Sobic010G113100--Sobic006G135300 Sobic010G113100--Sobic007G057400 Sobic002G216100 Sobic002G216100 Sobic010G113100--Sobic002G216100 Sobic001G506800 Sobic001G506800 Sobic010G113100--Sobic001G506800 Sobic010G113100--Sobic001G360500 Sobic007G090472 Sobic007G090472 Sobic001G360500--Sobic007G090472 Sobic010G082000 Sobic010G082000 Sobic001G360500--Sobic010G082000 Sobic001G360500--Sobic007G073000 Sobic001G360500--Sobic002G101400 Sobic001G360500--Sobic007G057400 Sobic001G360500--Sobic006G092700 Sobic006G229100 Sobic006G229100 Sobic001G360500--Sobic006G229100 Sobic006G003600 Sobic006G003600 Sobic001G360500--Sobic006G003600 Sobic003G322100 Sobic003G322100 Sobic001G360500--Sobic003G322100 Sobic002G185800 Sobic002G185800 Sobic005G046700--Sobic002G185800 Sobic005G046700--Sobic002G101400 Sobic005G046700--Sobic007G170300 Sobic007G178900 Sobic007G178900 Sobic005G046700--Sobic007G178900 Sobic005G046700--Sobic002G216100 Sobic007G176100 Sobic007G176100 Sobic005G046700--Sobic007G176100 Sobic002G404100 Sobic002G404100 Sobic005G046700--Sobic002G404100 Sobic007G176000 Sobic007G176000 Sobic005G046700--Sobic007G176000 Sobic004G139300 Sobic004G139300 Sobic005G046700--Sobic004G139300 Sobic006G092700--Sobic006G135300 Sobic006G092700--Sobic010G082000 Sobic006G092700--Sobic010G028100 Sobic003G000100 Sobic003G000100 Sobic006G092700--Sobic003G000100 Sobic006G092700--Sobic007G073000 Sobic010G152400 Sobic010G152400 Sobic006G092700--Sobic010G152400 Sobic002G146000 Sobic002G146000 Sobic006G092700--Sobic002G146000 Sobic004G306900 Sobic004G306900 Sobic006G092700--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic006G092700--Sobic006G019700 Sobic007G015200 Sobic007G015200 Sobic007G170300--Sobic007G015200 Sobic007G170300--Sobic002G101400 Sobic007G170300--Sobic005G046700 Sobic003G203600 Sobic003G203600 Sobic007G170300--Sobic003G203600 Sobic006G028400 Sobic006G028400 Sobic007G170300--Sobic006G028400 Sobic006G183900 Sobic006G183900 Sobic007G170300--Sobic006G183900 Sobic007G170300--Sobic007G073000 Sobic007G170300--Sobic002G185800 Sobic003G287200 Sobic003G287200 Sobic007G170300--Sobic003G287200 Sobic003G353200 Sobic003G353200 Sobic003G053600--Sobic003G353200 Sobic005G063400 Sobic005G063400 Sobic003G053600--Sobic005G063400 Sobic006G174300 Sobic006G174300 Sobic003G053600--Sobic006G174300 Sobic010G031700 Sobic010G031700 Sobic003G053600--Sobic010G031700 Sobic006G277700 Sobic006G277700 Sobic003G053600--Sobic006G277700 Sobic003G053600--Sobic002G146000 Sobic003G053600--Sobic007G057400 Sobic005G206000 Sobic005G206000 Sobic003G053600--Sobic005G206000 Sobic003G053600--Sobic008G164450 Sobic007G073000--Sobic006G092700 Sobic007G073000--Sobic003G322100 Sobic003G215300 Sobic003G215300 Sobic007G073000--Sobic003G215300 Sobic007G073000--Sobic002G146000 Sobic007G073000--Sobic006G135300 Sobic002G195600 Sobic002G195600 Sobic007G073000--Sobic002G195600 Sobic007G073000--Sobic010G082000 Sobic007G073000--Sobic007G090472 Sobic003G240400 Sobic003G240400 Sobic007G073000--Sobic003G240400 Sobic007G057400--Sobic001G360500 Sobic007G057400--Sobic010G113100 Sobic007G057400--Sobic003G053600 Sobic009G088500 Sobic009G088500 Sobic007G057400--Sobic009G088500 Sobic007G057400--Sobic002G101400 Sobic007G057400--Sobic005G063400 Sobic007G057400--Sobic006G003600 Sobic007G057400--Sobic006G092700 Sobic007G057400--Sobic008G164450 Sobic010G028100--Sobic006G092700 Sobic010G028100--Sobic006G135300 Sobic010G028100--Sobic003G000100 Sobic010G028100--Sobic007G090472 Sobic010G028100--Sobic010G082000 Sobic010G028100--Sobic002G146000 Sobic010G028100--Sobic010G113100 Sobic010G028100--Sobic006G003600 Sobic003G182200 Sobic003G182200 Sobic010G028100--Sobic003G182200
Octagon: transcription factors


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