Gene annotation
Transcriptome id Sobic.007G170300.5,Sobic.007G170300.4,Sobic.007G170300.3,Sobic.007G170300.1
Synonym ATCCD8, Sb07g024250, CCD8, MAX4
Functional annotation beta,beta-carotene 9,10-dioxygenase, putative, expressed
UniProt A0A1Z5RBA0 , A0A1Z5RBG1 , C5YN82 , A0A1Z5RAH9
Pfam PF03055
Panther DB PTHR10543 PTHR10543:SF50
NCBI CDD KOG1285; Beta, beta-carotene 15,15'-dioxygenase and related enzymes
KEGG Orthology K17913; carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G32810 : carotenoid cleavage dioxygenase 8
RAP-DB (Rice) LOC_Os01g38580.1 : beta,beta-carotene 9,10-dioxygenase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU3Hr1G071170.5 , HORVU3Hr1G071170.4 , HORVU3Hr1G071170.1 , HORVU3Hr1G071170.3 , HORVU3Hr1G071170.2
Wheat TraesCS3D02G273500 , TraesCS3D02G273500 , TraesCS3B02G308000 , TraesCS3B02G308000 , TraesCS3A02G274300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G015200 cytochrome P450, putative, expressed -
2 Sobic.002G101400 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
3 Sobic.005G046700 LTPL114 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.003G203600 aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
5 Sobic.006G028400 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
6 Sobic.006G183900 cytochrome P450, putative, expressed -
7 Sobic.007G073000 - -
8 Sobic.002G185800 transporter, putative, expressed -
9 Sobic.003G287200 WRKY23, expressed -
10 Sobic.001G360500 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.007G090472 - -
12 Sobic.002G404100 annexin, putative, expressed -
13 Sobic.003G015300 expressed protein -
14 Sobic.002G185600 transporter, putative, expressed -
15 Sobic.006G229100 receptor-like kinase, putative, expressed -
16 Sobic.003G028300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
17 Sobic.001G455100 expressed protein -
18 Sobic.007G178900 CXE carboxylesterase, putative, expressed -
19 Sobic.002G195600 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
20 Sobic.003G322100 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase


Gene co-expression network
sample Sobic007G170300 Sobic007G170300 Sobic007G015200 Sobic007G015200 Sobic007G170300--Sobic007G015200 Sobic002G101400 Sobic002G101400 Sobic007G170300--Sobic002G101400 Sobic005G046700 Sobic005G046700 Sobic007G170300--Sobic005G046700 Sobic003G203600 Sobic003G203600 Sobic007G170300--Sobic003G203600 Sobic006G028400 Sobic006G028400 Sobic007G170300--Sobic006G028400 Sobic006G183900 Sobic006G183900 Sobic007G170300--Sobic006G183900 Sobic007G073000 Sobic007G073000 Sobic007G170300--Sobic007G073000 Sobic002G185800 Sobic002G185800 Sobic007G170300--Sobic002G185800 Sobic003G287200 Sobic003G287200 Sobic007G170300--Sobic003G287200 Sobic007G015200--Sobic007G170300 Sobic004G009400 Sobic004G009400 Sobic007G015200--Sobic004G009400 Sobic007G015200--Sobic007G073000 Sobic007G015200--Sobic002G101400 Sobic002G195600 Sobic002G195600 Sobic007G015200--Sobic002G195600 Sobic003G053600 Sobic003G053600 Sobic007G015200--Sobic003G053600 Sobic001G360500 Sobic001G360500 Sobic007G015200--Sobic001G360500 Sobic007G015200--Sobic003G203600 Sobic003G228700 Sobic003G228700 Sobic007G015200--Sobic003G228700 Sobic010G113100 Sobic010G113100 Sobic002G101400--Sobic010G113100 Sobic002G101400--Sobic001G360500 Sobic002G101400--Sobic005G046700 Sobic006G092700 Sobic006G092700 Sobic002G101400--Sobic006G092700 Sobic002G101400--Sobic007G170300 Sobic002G101400--Sobic003G053600 Sobic002G101400--Sobic007G073000 Sobic007G057400 Sobic007G057400 Sobic002G101400--Sobic007G057400 Sobic010G028100 Sobic010G028100 Sobic002G101400--Sobic010G028100 Sobic005G046700--Sobic002G185800 Sobic005G046700--Sobic002G101400 Sobic005G046700--Sobic007G170300 Sobic007G178900 Sobic007G178900 Sobic005G046700--Sobic007G178900 Sobic002G216100 Sobic002G216100 Sobic005G046700--Sobic002G216100 Sobic007G176100 Sobic007G176100 Sobic005G046700--Sobic007G176100 Sobic002G404100 Sobic002G404100 Sobic005G046700--Sobic002G404100 Sobic007G176000 Sobic007G176000 Sobic005G046700--Sobic007G176000 Sobic004G139300 Sobic004G139300 Sobic005G046700--Sobic004G139300 Sobic001G067100 Sobic001G067100 Sobic003G203600--Sobic001G067100 Sobic003G203600--Sobic002G195600 Sobic006G135300 Sobic006G135300 Sobic003G203600--Sobic006G135300 Sobic010G082000 Sobic010G082000 Sobic003G203600--Sobic010G082000 Sobic003G426500 Sobic003G426500 Sobic003G203600--Sobic003G426500 Sobic003G203600--Sobic006G028400 Sobic003G203600--Sobic006G092700 Sobic003G203600--Sobic007G170300 Sobic004G038700 Sobic004G038700 Sobic003G203600--Sobic004G038700 Sobic006G028400--Sobic006G183900 Sobic006G028400--Sobic003G203600 Sobic006G028400--Sobic007G170300 Sobic007G109600 Sobic007G109600 Sobic006G028400--Sobic007G109600 Sobic006G028400--Sobic007G178900 Sobic006G028400--Sobic002G185800 Sobic002G365500 Sobic002G365500 Sobic006G028400--Sobic002G365500 Sobic004G071000 Sobic004G071000 Sobic006G028400--Sobic004G071000 Sobic002G365550 Sobic002G365550 Sobic006G028400--Sobic002G365550 Sobic006G183900--Sobic003G287200 Sobic006G183900--Sobic007G109600 Sobic006G183900--Sobic006G028400 Sobic007G090472 Sobic007G090472 Sobic006G183900--Sobic007G090472 Sobic008G034700 Sobic008G034700 Sobic006G183900--Sobic008G034700 Sobic004G248500 Sobic004G248500 Sobic006G183900--Sobic004G248500 Sobic006G183900--Sobic007G170300 Sobic002G365600 Sobic002G365600 Sobic006G183900--Sobic002G365600 Sobic006G183900--Sobic002G365500 Sobic007G073000--Sobic006G092700 Sobic003G322100 Sobic003G322100 Sobic007G073000--Sobic003G322100 Sobic003G215300 Sobic003G215300 Sobic007G073000--Sobic003G215300 Sobic002G146000 Sobic002G146000 Sobic007G073000--Sobic002G146000 Sobic007G073000--Sobic006G135300 Sobic007G073000--Sobic002G195600 Sobic007G073000--Sobic010G082000 Sobic007G073000--Sobic007G090472 Sobic003G240400 Sobic003G240400 Sobic007G073000--Sobic003G240400 Sobic002G185800--Sobic005G046700 Sobic002G185800--Sobic004G139300 Sobic002G185800--Sobic002G216100 Sobic006G197100 Sobic006G197100 Sobic002G185800--Sobic006G197100 Sobic001G264000 Sobic001G264000 Sobic002G185800--Sobic001G264000 Sobic002G185800--Sobic007G178900 Sobic002G185800--Sobic007G176100 Sobic006G256900 Sobic006G256900 Sobic002G185800--Sobic006G256900 Sobic002G185800--Sobic007G176000 Sobic003G287200--Sobic006G183900 Sobic006G229100 Sobic006G229100 Sobic003G287200--Sobic006G229100 Sobic001G002800 Sobic001G002800 Sobic003G287200--Sobic001G002800 Sobic003G287200--Sobic001G360500 Sobic001G503000 Sobic001G503000 Sobic003G287200--Sobic001G503000 Sobic003G287200--Sobic007G090472 Sobic010G096700 Sobic010G096700 Sobic003G287200--Sobic010G096700 Sobic003G287200--Sobic007G170300 Sobic006G117500 Sobic006G117500 Sobic003G287200--Sobic006G117500
Octagon: transcription factors


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