Gene annotation
Transcriptome id Sobic.003G322100.1
Synonym Sb03g036870
Functional annotation polyphenol oxidase, putative, expressed
UniProt C5XMC9
Pfam PF12142 PF00264 PF12143
Panther DB PTHR11474 PTHR11474:SF33
NCBI CDD -
KEGG Orthology K00422; polyphenol oxidase
Gene Ontology GO:0004097; catechol oxidase activity GO:0016491oxidoreductase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g58100.1 : polyphenol oxidase, putative, expressed
MaizeGDB (Corn) Zm00025a027236 , Zm00025a056786 , Zm00025a057062
Brachypodium KQK10135
Barley HORVU2Hr1G103000.6 , HORVU2Hr1G103000.7 , HORVU2Hr1G103000.4 , HORVU2Hr1G103000.5 , HORVU2Hr1G103000.2 , HORVU2Hr1G103000.3 , HORVU2Hr1G103000.1 , HORVU2Hr1G103000.8 , HORVU2Hr1G103000.9 , HORVU2Hr1G103040.2 , HORVU2Hr1G103040.3 , HORVU2Hr1G103040.1 , HORVU2Hr1G103040.4 , HORVU2Hr1G103040.5
Wheat TraesCS2B02G491100 , TraesCS2B02G491400 , TraesCS2B02G491000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G073000 - -
2 Sobic.010G152400 glycosyltransferase, putative, expressed -
3 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
4 Sobic.005G177400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
5 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
6 Sobic.006G135300 expressed protein -
7 Sobic.003G240400 leaf senescence related protein, putative, expressed -
8 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
9 Sobic.004G322000 hypro1, putative, expressed -
10 Sobic.005G069500 OsWAK92 - OsWAK receptor-like protein kinase, expressed -
11 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
12 Sobic.002G146000 "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
13 Sobic.004G029400 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
14 Sobic.010G031700 thaumatin, putative, expressed -
15 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
16 Sobic.003G282300 POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
17 Sobic.006G085700 OsPDIL1-2 protein disulfide isomerase PDIL1-2, expressed K09580: PDIA1, protein disulfide-isomerase A1
18 Sobic.001G274400 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
19 Sobic.001G360500 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.008G035800 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase


Gene co-expression network
sample Sobic003G322100 Sobic003G322100 Sobic007G073000 Sobic007G073000 Sobic003G322100--Sobic007G073000 Sobic010G152400 Sobic010G152400 Sobic003G322100--Sobic010G152400 Sobic010G082000 Sobic010G082000 Sobic003G322100--Sobic010G082000 Sobic005G177400 Sobic005G177400 Sobic003G322100--Sobic005G177400 Sobic006G092700 Sobic006G092700 Sobic003G322100--Sobic006G092700 Sobic006G135300 Sobic006G135300 Sobic003G322100--Sobic006G135300 Sobic003G240400 Sobic003G240400 Sobic003G322100--Sobic003G240400 Sobic003G215300 Sobic003G215300 Sobic003G322100--Sobic003G215300 Sobic004G322000 Sobic004G322000 Sobic003G322100--Sobic004G322000 Sobic007G073000--Sobic006G092700 Sobic007G073000--Sobic003G322100 Sobic007G073000--Sobic003G215300 Sobic002G146000 Sobic002G146000 Sobic007G073000--Sobic002G146000 Sobic007G073000--Sobic006G135300 Sobic002G195600 Sobic002G195600 Sobic007G073000--Sobic002G195600 Sobic007G073000--Sobic010G082000 Sobic007G090472 Sobic007G090472 Sobic007G073000--Sobic007G090472 Sobic007G073000--Sobic003G240400 Sobic003G000100 Sobic003G000100 Sobic010G152400--Sobic003G000100 Sobic004G322100 Sobic004G322100 Sobic010G152400--Sobic004G322100 Sobic010G152400--Sobic003G240400 Sobic004G306900 Sobic004G306900 Sobic010G152400--Sobic004G306900 Sobic010G152400--Sobic006G092700 Sobic010G152400--Sobic010G082000 Sobic006G003100 Sobic006G003100 Sobic010G152400--Sobic006G003100 Sobic004G106100 Sobic004G106100 Sobic010G152400--Sobic004G106100 Sobic006G019700 Sobic006G019700 Sobic010G152400--Sobic006G019700 Sobic010G082000--Sobic006G092700 Sobic010G082000--Sobic003G240400 Sobic010G082000--Sobic006G135300 Sobic010G082000--Sobic010G152400 Sobic006G028500 Sobic006G028500 Sobic010G082000--Sobic006G028500 Sobic010G082000--Sobic003G215300 Sobic010G082000--Sobic006G019700 Sobic010G082000--Sobic007G073000 Sobic006G196400 Sobic006G196400 Sobic010G082000--Sobic006G196400 Sobic005G177400--Sobic003G322100 Sobic005G177400--Sobic007G073000 Sobic001G503000 Sobic001G503000 Sobic005G177400--Sobic001G503000 Sobic004G193500 Sobic004G193500 Sobic005G177400--Sobic004G193500 Sobic001G274400 Sobic001G274400 Sobic005G177400--Sobic001G274400 Sobic005G177400--Sobic010G082000 Sobic001G360500 Sobic001G360500 Sobic005G177400--Sobic001G360500 Sobic010G096700 Sobic010G096700 Sobic005G177400--Sobic010G096700 Sobic005G177400--Sobic006G092700 Sobic006G092700--Sobic006G135300 Sobic006G092700--Sobic010G082000 Sobic010G028100 Sobic010G028100 Sobic006G092700--Sobic010G028100 Sobic006G092700--Sobic003G000100 Sobic006G092700--Sobic007G073000 Sobic006G092700--Sobic010G152400 Sobic006G092700--Sobic002G146000 Sobic006G092700--Sobic004G306900 Sobic006G092700--Sobic006G019700 Sobic006G135300--Sobic006G092700 Sobic006G135300--Sobic010G082000 Sobic006G135300--Sobic007G073000 Sobic006G135300--Sobic010G028100 Sobic006G135300--Sobic006G019700 Sobic006G135300--Sobic010G152400 Sobic006G135300--Sobic003G322100 Sobic006G135300--Sobic004G306900 Sobic006G135300--Sobic002G146000 Sobic003G240400--Sobic010G082000 Sobic003G240400--Sobic003G215300 Sobic001G263300 Sobic001G263300 Sobic003G240400--Sobic001G263300 Sobic003G240400--Sobic006G196400 Sobic007G090600 Sobic007G090600 Sobic003G240400--Sobic007G090600 Sobic003G240400--Sobic010G152400 Sobic003G240400--Sobic006G028500 Sobic003G240400--Sobic003G000100 Sobic008G035800 Sobic008G035800 Sobic003G240400--Sobic008G035800 Sobic003G215300--Sobic007G090600 Sobic006G031100 Sobic006G031100 Sobic003G215300--Sobic006G031100 Sobic002G115600 Sobic002G115600 Sobic003G215300--Sobic002G115600 Sobic003G215300--Sobic003G240400 Sobic003G215300--Sobic006G196400 Sobic003G215300--Sobic001G263300 Sobic003G215300--Sobic007G073000 Sobic003G215300--Sobic001G503000 Sobic002G029600 Sobic002G029600 Sobic003G215300--Sobic002G029600 Sobic004G322000--Sobic007G090600 Sobic004G322000--Sobic003G215300 Sobic004G322000--Sobic006G031100 Sobic003G140200 Sobic003G140200 Sobic004G322000--Sobic003G140200 Sobic003G282300 Sobic003G282300 Sobic004G322000--Sobic003G282300 Sobic004G322000--Sobic003G240400 Sobic004G322000--Sobic008G035800 Sobic004G322000--Sobic010G082000 Sobic004G014600 Sobic004G014600 Sobic004G322000--Sobic004G014600
Octagon: transcription factors


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