Gene annotation
Transcriptome id Sobic.005G177400.1
Synonym ATCHIA, CHIA, Sb05g023690
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence (PubMedID : 27586543)
glycosyl hydrolase, putative, expressed
UniProt C5Y5U8
Pfam PF00704
Panther DB PTHR11177 PTHR11177:SF214
NCBI CDD -
KEGG Orthology K01183; chitinase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G24090 : chitinase A
RAP-DB (Rice) LOC_Os05g15770.1 : glycosyl hydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a029435
Brachypodium -
Barley HORVU5Hr1G081460.2 , HORVU5Hr1G081460.3 , HORVU5Hr1G081460.1 , HORVU5Hr1G081460.4
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G322100 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
2 Sobic.007G073000 - -
3 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
4 Sobic.004G193500 expressed protein -
5 Sobic.001G274400 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
6 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
7 Sobic.001G360500 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.010G096700 leaf senescence related protein, putative, expressed -
9 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
10 Sobic.008G138900 MLA12, putative, expressed -
11 Sobic.005G069500 OsWAK92 - OsWAK receptor-like protein kinase, expressed -
12 Sobic.004G322000 hypro1, putative, expressed -
13 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
14 Sobic.005G182800 NB-ARC domain containing protein, expressed -
15 Sobic.006G135300 expressed protein -
16 Sobic.006G229100 receptor-like kinase, putative, expressed -
17 Sobic.002G146000 "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
18 Sobic.006G085700 OsPDIL1-2 protein disulfide isomerase PDIL1-2, expressed K09580: PDIA1, protein disulfide-isomerase A1
19 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -
20 Sobic.001G506600 exostosin family domain containing protein, expressed -


Gene co-expression network
sample Sobic005G177400 Sobic005G177400 Sobic003G322100 Sobic003G322100 Sobic005G177400--Sobic003G322100 Sobic007G073000 Sobic007G073000 Sobic005G177400--Sobic007G073000 Sobic001G503000 Sobic001G503000 Sobic005G177400--Sobic001G503000 Sobic004G193500 Sobic004G193500 Sobic005G177400--Sobic004G193500 Sobic001G274400 Sobic001G274400 Sobic005G177400--Sobic001G274400 Sobic010G082000 Sobic010G082000 Sobic005G177400--Sobic010G082000 Sobic001G360500 Sobic001G360500 Sobic005G177400--Sobic001G360500 Sobic010G096700 Sobic010G096700 Sobic005G177400--Sobic010G096700 Sobic006G092700 Sobic006G092700 Sobic005G177400--Sobic006G092700 Sobic003G322100--Sobic007G073000 Sobic010G152400 Sobic010G152400 Sobic003G322100--Sobic010G152400 Sobic003G322100--Sobic010G082000 Sobic003G322100--Sobic005G177400 Sobic003G322100--Sobic006G092700 Sobic006G135300 Sobic006G135300 Sobic003G322100--Sobic006G135300 Sobic003G240400 Sobic003G240400 Sobic003G322100--Sobic003G240400 Sobic003G215300 Sobic003G215300 Sobic003G322100--Sobic003G215300 Sobic004G322000 Sobic004G322000 Sobic003G322100--Sobic004G322000 Sobic007G073000--Sobic006G092700 Sobic007G073000--Sobic003G322100 Sobic007G073000--Sobic003G215300 Sobic002G146000 Sobic002G146000 Sobic007G073000--Sobic002G146000 Sobic007G073000--Sobic006G135300 Sobic002G195600 Sobic002G195600 Sobic007G073000--Sobic002G195600 Sobic007G073000--Sobic010G082000 Sobic007G090472 Sobic007G090472 Sobic007G073000--Sobic007G090472 Sobic007G073000--Sobic003G240400 Sobic001G506600 Sobic001G506600 Sobic001G503000--Sobic001G506600 Sobic001G503000--Sobic010G096700 Sobic005G115300 Sobic005G115300 Sobic001G503000--Sobic005G115300 Sobic001G503000--Sobic003G215300 Sobic005G104200 Sobic005G104200 Sobic001G503000--Sobic005G104200 Sobic006G209000 Sobic006G209000 Sobic001G503000--Sobic006G209000 Sobic008G138900 Sobic008G138900 Sobic001G503000--Sobic008G138900 Sobic001G503000--Sobic010G082000 Sobic001G503000--Sobic004G322000 Sobic004G193500--Sobic002G146000 Sobic004G193500--Sobic001G274400 Sobic004G193500--Sobic007G073000 Sobic004G193500--Sobic005G177400 Sobic008G164450 Sobic008G164450 Sobic004G193500--Sobic008G164450 Sobic003G255600 Sobic003G255600 Sobic004G193500--Sobic003G255600 Sobic004G193500--Sobic006G135300 Sobic004G193500--Sobic006G092700 Sobic006G224500 Sobic006G224500 Sobic004G193500--Sobic006G224500 Sobic004G014600 Sobic004G014600 Sobic001G274400--Sobic004G014600 Sobic009G165100 Sobic009G165100 Sobic001G274400--Sobic009G165100 Sobic010G152500 Sobic010G152500 Sobic001G274400--Sobic010G152500 Sobic001G274400--Sobic004G322000 Sobic003G382200 Sobic003G382200 Sobic001G274400--Sobic003G382200 Sobic007G090600 Sobic007G090600 Sobic001G274400--Sobic007G090600 Sobic002G029600 Sobic002G029600 Sobic001G274400--Sobic002G029600 Sobic006G031100 Sobic006G031100 Sobic001G274400--Sobic006G031100 Sobic001G274400--Sobic006G135300 Sobic010G082000--Sobic006G092700 Sobic010G082000--Sobic003G240400 Sobic010G082000--Sobic006G135300 Sobic010G082000--Sobic010G152400 Sobic006G028500 Sobic006G028500 Sobic010G082000--Sobic006G028500 Sobic010G082000--Sobic003G215300 Sobic006G019700 Sobic006G019700 Sobic010G082000--Sobic006G019700 Sobic010G082000--Sobic007G073000 Sobic006G196400 Sobic006G196400 Sobic010G082000--Sobic006G196400 Sobic001G360500--Sobic007G090472 Sobic001G360500--Sobic010G082000 Sobic001G360500--Sobic007G073000 Sobic002G101400 Sobic002G101400 Sobic001G360500--Sobic002G101400 Sobic007G057400 Sobic007G057400 Sobic001G360500--Sobic007G057400 Sobic001G360500--Sobic006G092700 Sobic006G229100 Sobic006G229100 Sobic001G360500--Sobic006G229100 Sobic006G003600 Sobic006G003600 Sobic001G360500--Sobic006G003600 Sobic001G360500--Sobic003G322100 Sobic010G096700--Sobic001G506600 Sobic010G096700--Sobic001G503000 Sobic010G096700--Sobic006G209000 Sobic010G096700--Sobic004G322000 Sobic010G096700--Sobic003G215300 Sobic010G096700--Sobic005G104200 Sobic005G066300 Sobic005G066300 Sobic010G096700--Sobic005G066300 Sobic010G096700--Sobic001G274400 Sobic010G096700--Sobic005G115300 Sobic006G092700--Sobic006G135300 Sobic006G092700--Sobic010G082000 Sobic010G028100 Sobic010G028100 Sobic006G092700--Sobic010G028100 Sobic003G000100 Sobic003G000100 Sobic006G092700--Sobic003G000100 Sobic006G092700--Sobic007G073000 Sobic006G092700--Sobic010G152400 Sobic006G092700--Sobic002G146000 Sobic004G306900 Sobic004G306900 Sobic006G092700--Sobic004G306900 Sobic006G092700--Sobic006G019700
Octagon: transcription factors


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