Gene annotation
Transcriptome id Sobic.001G503000.1
Synonym lateral organ boundaries, SbLBD10, ASL16, Sb01g046990, LBD29
Functional annotation "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment" (PubMedID : 20499123)
DUF260 domain containing protein, putative, expressed
UniProt C5WXW9
Pfam PF03195
Panther DB PTHR31529 PTHR31529:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G42440 : Lateral organ boundaries (LOB) domain family protein
RAP-DB (Rice) LOC_Os03g05510.1 : DUF260 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a052884 , Zm00025a000663 , Zm00025a053423 , Zm00025a000662 , Zm00025a003841 , Zm00025a032775 , Zm00025a023282 , Zm00025a001561
Brachypodium KQK02883 , KQK02882 , KQK02881 , KQK02880 , KQK02884 , KQK06241 , KQK06240 , KQK22581 , KQK01414 , KQK23639 , KQK23638
Barley HORVU4Hr1G080150.1 , HORVU4Hr1G080150.2 , HORVU0Hr1G017670.1 , HORVU4Hr1G080160.1 , HORVU4Hr1G080160.3 , HORVU4Hr1G080160.2 , HORVU0Hr1G017670.3 , HORVU0Hr1G017670.2 , HORVU0Hr1G017670.5 , HORVU0Hr1G017670.4 , HORVU4Hr1G063160.6 , HORVU4Hr1G063160.4 , HORVU4Hr1G063160.5 , HORVU4Hr1G063160.3 , HORVU4Hr1G063160.1
Wheat TraesCS4B02G224600 , TraesCS4D02G225200 , TraesCS4A02G067300 , TraesCS6D02G382600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G506600 exostosin family domain containing protein, expressed -
2 Sobic.010G096700 leaf senescence related protein, putative, expressed -
3 Sobic.005G115300 expressed protein -
4 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
5 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -
7 Sobic.008G138900 MLA12, putative, expressed -
8 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
9 Sobic.004G322000 hypro1, putative, expressed -
10 Sobic.001G263300 glycosyltransferase, putative, expressed K18207: POMGNT2, protein O-mannose beta-1,4-N-acetylglucosaminyltransferase
11 Sobic.007G073000 - -
12 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -
13 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
14 Sobic.004G312200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@WRKY32, expressed -
15 Sobic.007G090472 - -
16 Sobic.002G019100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
17 Sobic.006G196400 U-box, putative, expressed -
18 Sobic.001G506700 exostosin family domain containing protein, expressed -
19 Sobic.005G175900 expressed protein -
20 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -


Gene co-expression network
sample Sobic001G503000 Sobic001G503000 Sobic001G506600 Sobic001G506600 Sobic001G503000--Sobic001G506600 Sobic010G096700 Sobic010G096700 Sobic001G503000--Sobic010G096700 Sobic005G115300 Sobic005G115300 Sobic001G503000--Sobic005G115300 Sobic003G215300 Sobic003G215300 Sobic001G503000--Sobic003G215300 Sobic005G104200 Sobic005G104200 Sobic001G503000--Sobic005G104200 Sobic006G209000 Sobic006G209000 Sobic001G503000--Sobic006G209000 Sobic008G138900 Sobic008G138900 Sobic001G503000--Sobic008G138900 Sobic010G082000 Sobic010G082000 Sobic001G503000--Sobic010G082000 Sobic004G322000 Sobic004G322000 Sobic001G503000--Sobic004G322000 Sobic001G506600--Sobic010G096700 Sobic001G506600--Sobic001G503000 Sobic001G506600--Sobic005G104200 Sobic002G029600 Sobic002G029600 Sobic001G506600--Sobic002G029600 Sobic002G411000 Sobic002G411000 Sobic001G506600--Sobic002G411000 Sobic002G019100 Sobic002G019100 Sobic001G506600--Sobic002G019100 Sobic001G506600--Sobic004G322000 Sobic001G506600--Sobic006G209000 Sobic001G506600--Sobic003G215300 Sobic010G096700--Sobic001G506600 Sobic010G096700--Sobic001G503000 Sobic010G096700--Sobic006G209000 Sobic010G096700--Sobic004G322000 Sobic010G096700--Sobic003G215300 Sobic010G096700--Sobic005G104200 Sobic005G066300 Sobic005G066300 Sobic010G096700--Sobic005G066300 Sobic001G274400 Sobic001G274400 Sobic010G096700--Sobic001G274400 Sobic010G096700--Sobic005G115300 Sobic005G115300--Sobic001G503000 Sobic004G312200 Sobic004G312200 Sobic005G115300--Sobic004G312200 Sobic004G248500 Sobic004G248500 Sobic005G115300--Sobic004G248500 Sobic005G115300--Sobic005G104200 Sobic005G115300--Sobic001G506600 Sobic006G229100 Sobic006G229100 Sobic005G115300--Sobic006G229100 Sobic001G348800 Sobic001G348800 Sobic005G115300--Sobic001G348800 Sobic005G115300--Sobic010G096700 Sobic005G115300--Sobic010G082000 Sobic007G090600 Sobic007G090600 Sobic003G215300--Sobic007G090600 Sobic006G031100 Sobic006G031100 Sobic003G215300--Sobic006G031100 Sobic002G115600 Sobic002G115600 Sobic003G215300--Sobic002G115600 Sobic003G240400 Sobic003G240400 Sobic003G215300--Sobic003G240400 Sobic006G196400 Sobic006G196400 Sobic003G215300--Sobic006G196400 Sobic001G263300 Sobic001G263300 Sobic003G215300--Sobic001G263300 Sobic007G073000 Sobic007G073000 Sobic003G215300--Sobic007G073000 Sobic003G215300--Sobic001G503000 Sobic003G215300--Sobic002G029600 Sobic001G238500 Sobic001G238500 Sobic005G104200--Sobic001G238500 Sobic005G104200--Sobic001G506600 Sobic005G104200--Sobic002G019100 Sobic005G104200--Sobic001G503000 Sobic006G117500 Sobic006G117500 Sobic005G104200--Sobic006G117500 Sobic004G126500 Sobic004G126500 Sobic005G104200--Sobic004G126500 Sobic006G009700 Sobic006G009700 Sobic005G104200--Sobic006G009700 Sobic005G104200--Sobic002G411000 Sobic005G104200--Sobic001G348800 Sobic007G154100 Sobic007G154100 Sobic006G209000--Sobic007G154100 Sobic006G108300 Sobic006G108300 Sobic006G209000--Sobic006G108300 Sobic005G071900 Sobic005G071900 Sobic006G209000--Sobic005G071900 Sobic004G312500 Sobic004G312500 Sobic006G209000--Sobic004G312500 Sobic006G209000--Sobic001G503000 Sobic006G209000--Sobic002G029600 Sobic006G209000--Sobic010G096700 Sobic006G209000--Sobic001G506600 Sobic009G106100 Sobic009G106100 Sobic006G209000--Sobic009G106100 Sobic005G182800 Sobic005G182800 Sobic008G138900--Sobic005G182800 Sobic008G138900--Sobic001G503000 Sobic003G079100 Sobic003G079100 Sobic008G138900--Sobic003G079100 Sobic004G014600 Sobic004G014600 Sobic008G138900--Sobic004G014600 Sobic005G065700 Sobic005G065700 Sobic008G138900--Sobic005G065700 Sobic002G195600 Sobic002G195600 Sobic008G138900--Sobic002G195600 Sobic008G138900--Sobic002G029600 Sobic008G138900--Sobic007G154100 Sobic008G138900--Sobic001G506600 Sobic006G092700 Sobic006G092700 Sobic010G082000--Sobic006G092700 Sobic010G082000--Sobic003G240400 Sobic006G135300 Sobic006G135300 Sobic010G082000--Sobic006G135300 Sobic010G152400 Sobic010G152400 Sobic010G082000--Sobic010G152400 Sobic006G028500 Sobic006G028500 Sobic010G082000--Sobic006G028500 Sobic010G082000--Sobic003G215300 Sobic006G019700 Sobic006G019700 Sobic010G082000--Sobic006G019700 Sobic010G082000--Sobic007G073000 Sobic010G082000--Sobic006G196400 Sobic004G322000--Sobic007G090600 Sobic004G322000--Sobic003G215300 Sobic004G322000--Sobic006G031100 Sobic003G140200 Sobic003G140200 Sobic004G322000--Sobic003G140200 Sobic003G282300 Sobic003G282300 Sobic004G322000--Sobic003G282300 Sobic004G322000--Sobic003G240400 Sobic008G035800 Sobic008G035800 Sobic004G322000--Sobic008G035800 Sobic004G322000--Sobic010G082000 Sobic004G322000--Sobic004G014600
Octagon: transcription factors


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