Gene annotation
Transcriptome id Sobic.001G263300.1
Synonym Sb01g025290
Functional annotation glycosyltransferase, putative, expressed
UniProt C5WNC2
Pfam PF04577
Panther DB PTHR20961 PTHR20961:SF31
NCBI CDD KOG4698; Uncharacterized conserved protein
KEGG Orthology K18207; POMGNT2, protein O-mannose beta-1,4-N-acetylglucosaminyltransferase
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups


Orthologs (automatic annotation)
TAIR AT3G18180 : Glycosyltransferase family 61 protein
RAP-DB (Rice) LOC_Os06g20570.1 : glycosyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a003874
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G240400 leaf senescence related protein, putative, expressed -
2 Sobic.005G175900 expressed protein -
3 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
4 Sobic.002G115600 membrane protein, putative, expressed -
5 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
6 Sobic.006G196400 U-box, putative, expressed -
7 Sobic.005G097600 gibberellin 20 oxidase 2, putative, expressed -
8 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -
9 Sobic.004G322000 hypro1, putative, expressed -
10 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
11 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
12 Sobic.002G118900 auxin-induced protein 5NG4, putative, expressed -
13 Sobic.008G035800 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
14 Sobic.001G506600 exostosin family domain containing protein, expressed -
15 Sobic.002G003400 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.003G140200 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
18 Sobic.005G052700 ZOS11-01 - C2H2 zinc finger protein, expressed -
19 Sobic.004G271800 WRKY66, expressed -
20 Sobic.003G282300 POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed -


Gene co-expression network
sample Sobic001G263300 Sobic001G263300 Sobic003G240400 Sobic003G240400 Sobic001G263300--Sobic003G240400 Sobic005G175900 Sobic005G175900 Sobic001G263300--Sobic005G175900 Sobic003G215300 Sobic003G215300 Sobic001G263300--Sobic003G215300 Sobic002G115600 Sobic002G115600 Sobic001G263300--Sobic002G115600 Sobic007G090600 Sobic007G090600 Sobic001G263300--Sobic007G090600 Sobic006G196400 Sobic006G196400 Sobic001G263300--Sobic006G196400 Sobic005G097600 Sobic005G097600 Sobic001G263300--Sobic005G097600 Sobic006G031100 Sobic006G031100 Sobic001G263300--Sobic006G031100 Sobic004G322000 Sobic004G322000 Sobic001G263300--Sobic004G322000 Sobic010G082000 Sobic010G082000 Sobic003G240400--Sobic010G082000 Sobic003G240400--Sobic003G215300 Sobic003G240400--Sobic001G263300 Sobic003G240400--Sobic006G196400 Sobic003G240400--Sobic007G090600 Sobic010G152400 Sobic010G152400 Sobic003G240400--Sobic010G152400 Sobic006G028500 Sobic006G028500 Sobic003G240400--Sobic006G028500 Sobic003G000100 Sobic003G000100 Sobic003G240400--Sobic003G000100 Sobic008G035800 Sobic008G035800 Sobic003G240400--Sobic008G035800 Sobic005G175900--Sobic001G263300 Sobic005G175900--Sobic006G196400 Sobic005G175900--Sobic002G115600 Sobic005G175900--Sobic003G215300 Sobic005G175900--Sobic007G090600 Sobic005G175900--Sobic006G031100 Sobic002G003400 Sobic002G003400 Sobic005G175900--Sobic002G003400 Sobic005G175900--Sobic010G082000 Sobic005G175900--Sobic003G240400 Sobic003G215300--Sobic007G090600 Sobic003G215300--Sobic006G031100 Sobic003G215300--Sobic002G115600 Sobic003G215300--Sobic003G240400 Sobic003G215300--Sobic006G196400 Sobic003G215300--Sobic001G263300 Sobic007G073000 Sobic007G073000 Sobic003G215300--Sobic007G073000 Sobic001G503000 Sobic001G503000 Sobic003G215300--Sobic001G503000 Sobic002G029600 Sobic002G029600 Sobic003G215300--Sobic002G029600 Sobic002G115600--Sobic003G215300 Sobic002G115600--Sobic006G196400 Sobic002G115600--Sobic001G263300 Sobic002G115600--Sobic007G090600 Sobic005G052700 Sobic005G052700 Sobic002G115600--Sobic005G052700 Sobic002G391400 Sobic002G391400 Sobic002G115600--Sobic002G391400 Sobic002G118900 Sobic002G118900 Sobic002G115600--Sobic002G118900 Sobic006G205700 Sobic006G205700 Sobic002G115600--Sobic006G205700 Sobic002G115600--Sobic005G175900 Sobic007G090600--Sobic006G031100 Sobic003G282300 Sobic003G282300 Sobic007G090600--Sobic003G282300 Sobic007G090600--Sobic004G322000 Sobic007G090600--Sobic003G215300 Sobic004G014600 Sobic004G014600 Sobic007G090600--Sobic004G014600 Sobic007G090600--Sobic006G196400 Sobic007G090600--Sobic006G205700 Sobic007G090600--Sobic003G240400 Sobic007G090600--Sobic002G115600 Sobic006G196400--Sobic006G031100 Sobic006G196400--Sobic007G090600 Sobic005G080600 Sobic005G080600 Sobic006G196400--Sobic005G080600 Sobic006G196400--Sobic003G240400 Sobic006G196400--Sobic003G215300 Sobic006G196400--Sobic002G115600 Sobic006G196400--Sobic005G175900 Sobic006G196400--Sobic010G082000 Sobic006G196400--Sobic006G205700 Sobic005G097600--Sobic001G263300 Sobic002G003700 Sobic002G003700 Sobic005G097600--Sobic002G003700 Sobic005G097600--Sobic002G115600 Sobic004G351200 Sobic004G351200 Sobic005G097600--Sobic004G351200 Sobic010G158400 Sobic010G158400 Sobic005G097600--Sobic010G158400 Sobic005G097600--Sobic003G240400 Sobic005G097600--Sobic005G175900 Sobic004G248500 Sobic004G248500 Sobic005G097600--Sobic004G248500 Sobic005G097600--Sobic002G118900 Sobic006G031100--Sobic007G090600 Sobic006G031100--Sobic003G215300 Sobic006G031100--Sobic006G196400 Sobic006G031100--Sobic002G029600 Sobic006G031100--Sobic004G014600 Sobic005G182800 Sobic005G182800 Sobic006G031100--Sobic005G182800 Sobic006G085700 Sobic006G085700 Sobic006G031100--Sobic006G085700 Sobic006G031100--Sobic004G322000 Sobic006G031100--Sobic006G205700 Sobic004G322000--Sobic007G090600 Sobic004G322000--Sobic003G215300 Sobic004G322000--Sobic006G031100 Sobic003G140200 Sobic003G140200 Sobic004G322000--Sobic003G140200 Sobic004G322000--Sobic003G282300 Sobic004G322000--Sobic003G240400 Sobic004G322000--Sobic008G035800 Sobic004G322000--Sobic010G082000 Sobic004G322000--Sobic004G014600
Octagon: transcription factors


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