Gene annotation
Transcriptome id Sobic.005G097600.1
Synonym Sb05g008460
Functional annotation gibberellin 20 oxidase 2, putative, expressed
UniProt C5Y1M4
Pfam PF03171 PF14226
Panther DB PTHR10209 PTHR10209:SF152
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT2G36690 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os08g44590.1 : gibberellin 20 oxidase 2, putative, expressed
MaizeGDB (Corn) Zm00025a033959
Brachypodium -
Barley HORVU4Hr1G000050.5 , HORVU4Hr1G000050.4 , HORVU4Hr1G000050.7 , HORVU4Hr1G000050.1 , HORVU4Hr1G000050.3 , HORVU4Hr1G000050.2 , HORVU4Hr1G000050.8 , HORVU4Hr1G000050.11 , HORVU4Hr1G000050.10 , HORVU4Hr1G000050.12
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G263300 glycosyltransferase, putative, expressed K18207: POMGNT2, protein O-mannose beta-1,4-N-acetylglucosaminyltransferase
2 Sobic.002G003700 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.002G115600 membrane protein, putative, expressed -
4 Sobic.004G351200 -(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
5 Sobic.010G158400 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.003G240400 leaf senescence related protein, putative, expressed -
7 Sobic.005G175900 expressed protein -
8 Sobic.004G248500 GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.002G118900 auxin-induced protein 5NG4, putative, expressed -
10 Sobic.005G216700 plant protein of unknown function domain containing protein, expressed -
11 Sobic.007G109600 expressed protein -
12 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
13 Sobic.003G269900 OsSub12 - Putative Subtilisin homologue, expressed -
14 Sobic.001G212451 - -
15 Sobic.004G110700 DNA binding protein, putative, expressed -
16 Sobic.002G003400 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.004G271800 WRKY66, expressed -
18 Sobic.001G229000 xyloglucan galactosyltransferase KATAMARI1, putative, expressed -
19 Sobic.010G139100 serine/threonine-protein kinase, putative, expressed -
20 Sobic.001G514700 "Cytochrome P450, family 78,"("PubMedID : 26759170,PubMedID : 24597475")@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic005G097600 Sobic005G097600 Sobic001G263300 Sobic001G263300 Sobic005G097600--Sobic001G263300 Sobic002G003700 Sobic002G003700 Sobic005G097600--Sobic002G003700 Sobic002G115600 Sobic002G115600 Sobic005G097600--Sobic002G115600 Sobic004G351200 Sobic004G351200 Sobic005G097600--Sobic004G351200 Sobic010G158400 Sobic010G158400 Sobic005G097600--Sobic010G158400 Sobic003G240400 Sobic003G240400 Sobic005G097600--Sobic003G240400 Sobic005G175900 Sobic005G175900 Sobic005G097600--Sobic005G175900 Sobic004G248500 Sobic004G248500 Sobic005G097600--Sobic004G248500 Sobic002G118900 Sobic002G118900 Sobic005G097600--Sobic002G118900 Sobic001G263300--Sobic003G240400 Sobic001G263300--Sobic005G175900 Sobic003G215300 Sobic003G215300 Sobic001G263300--Sobic003G215300 Sobic001G263300--Sobic002G115600 Sobic007G090600 Sobic007G090600 Sobic001G263300--Sobic007G090600 Sobic006G196400 Sobic006G196400 Sobic001G263300--Sobic006G196400 Sobic001G263300--Sobic005G097600 Sobic006G031100 Sobic006G031100 Sobic001G263300--Sobic006G031100 Sobic004G322000 Sobic004G322000 Sobic001G263300--Sobic004G322000 Sobic006G150100 Sobic006G150100 Sobic002G003700--Sobic006G150100 Sobic004G110700 Sobic004G110700 Sobic002G003700--Sobic004G110700 Sobic005G127400 Sobic005G127400 Sobic002G003700--Sobic005G127400 Sobic006G170600 Sobic006G170600 Sobic002G003700--Sobic006G170600 Sobic003G349400 Sobic003G349400 Sobic002G003700--Sobic003G349400 Sobic002G122400 Sobic002G122400 Sobic002G003700--Sobic002G122400 Sobic001G229000 Sobic001G229000 Sobic002G003700--Sobic001G229000 Sobic003G132400 Sobic003G132400 Sobic002G003700--Sobic003G132400 Sobic006G028500 Sobic006G028500 Sobic002G003700--Sobic006G028500 Sobic002G115600--Sobic003G215300 Sobic002G115600--Sobic006G196400 Sobic002G115600--Sobic001G263300 Sobic002G115600--Sobic007G090600 Sobic005G052700 Sobic005G052700 Sobic002G115600--Sobic005G052700 Sobic002G391400 Sobic002G391400 Sobic002G115600--Sobic002G391400 Sobic002G115600--Sobic002G118900 Sobic006G205700 Sobic006G205700 Sobic002G115600--Sobic006G205700 Sobic002G115600--Sobic005G175900 Sobic005G216700 Sobic005G216700 Sobic004G351200--Sobic005G216700 Sobic009G032900 Sobic009G032900 Sobic004G351200--Sobic009G032900 Sobic010G139100 Sobic010G139100 Sobic004G351200--Sobic010G139100 Sobic002G334000 Sobic002G334000 Sobic004G351200--Sobic002G334000 Sobic002G068000 Sobic002G068000 Sobic004G351200--Sobic002G068000 Sobic004G351200--Sobic010G158400 Sobic007G206800 Sobic007G206800 Sobic004G351200--Sobic007G206800 Sobic002G392100 Sobic002G392100 Sobic004G351200--Sobic002G392100 Sobic004G351200--Sobic006G150100 Sobic010G158400--Sobic002G068000 Sobic010G158400--Sobic009G032900 Sobic003G426500 Sobic003G426500 Sobic010G158400--Sobic003G426500 Sobic010G158400--Sobic003G349400 Sobic010G158400--Sobic004G351200 Sobic003G185300 Sobic003G185300 Sobic010G158400--Sobic003G185300 Sobic010G158400--Sobic005G216700 Sobic009G259800 Sobic009G259800 Sobic010G158400--Sobic009G259800 Sobic010G158400--Sobic006G150100 Sobic010G082000 Sobic010G082000 Sobic003G240400--Sobic010G082000 Sobic003G240400--Sobic003G215300 Sobic003G240400--Sobic001G263300 Sobic003G240400--Sobic006G196400 Sobic003G240400--Sobic007G090600 Sobic010G152400 Sobic010G152400 Sobic003G240400--Sobic010G152400 Sobic003G240400--Sobic006G028500 Sobic003G000100 Sobic003G000100 Sobic003G240400--Sobic003G000100 Sobic008G035800 Sobic008G035800 Sobic003G240400--Sobic008G035800 Sobic005G175900--Sobic001G263300 Sobic005G175900--Sobic006G196400 Sobic005G175900--Sobic002G115600 Sobic005G175900--Sobic003G215300 Sobic005G175900--Sobic007G090600 Sobic005G175900--Sobic006G031100 Sobic002G003400 Sobic002G003400 Sobic005G175900--Sobic002G003400 Sobic005G175900--Sobic010G082000 Sobic005G175900--Sobic003G240400 Sobic005G115300 Sobic005G115300 Sobic004G248500--Sobic005G115300 Sobic001G503000 Sobic001G503000 Sobic004G248500--Sobic001G503000 Sobic001G464300 Sobic001G464300 Sobic004G248500--Sobic001G464300 Sobic007G109600 Sobic007G109600 Sobic004G248500--Sobic007G109600 Sobic004G312200 Sobic004G312200 Sobic004G248500--Sobic004G312200 Sobic001G348800 Sobic001G348800 Sobic004G248500--Sobic001G348800 Sobic006G183900 Sobic006G183900 Sobic004G248500--Sobic006G183900 Sobic005G104200 Sobic005G104200 Sobic004G248500--Sobic005G104200 Sobic004G248500--Sobic001G263300 Sobic003G269900 Sobic003G269900 Sobic002G118900--Sobic003G269900 Sobic002G118900--Sobic002G115600 Sobic002G118900--Sobic001G263300 Sobic005G216500 Sobic005G216500 Sobic002G118900--Sobic005G216500 Sobic002G118900--Sobic002G003400 Sobic002G118900--Sobic006G196400 Sobic002G118900--Sobic009G032900 Sobic003G046700 Sobic003G046700 Sobic002G118900--Sobic003G046700 Sobic005G080600 Sobic005G080600 Sobic002G118900--Sobic005G080600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.