Gene annotation
Transcriptome id Sobic.004G351200.1,Sobic.004G351200.3,Sobic.004G351200.2
Synonym PIP1E, PIP aquaporin, Sb04g037800, SbPIP1;5;plasma membrane intrinsic protein/aquaporin, PIP1, 4, TMP-C, PIP1;5
Functional annotation - (PubMedID : 24879770)
Up-regulated by osmotic stress. (PubMedID : 24879770)
aquaporin protein, putative, expressed
UniProt C5XW23
Pfam PF00230
Panther DB PTHR19139 PTHR19139:SF146
NCBI CDD KOG0223; Aquaporin (major intrinsic protein family)
KEGG Orthology K09872; aquaporin PIP
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT4G00430 : plasma membrane intrinsic protein 1;4
RAP-DB (Rice) LOC_Os02g57720.1 : aquaporin protein, putative, expressed
MaizeGDB (Corn) Zm00025a021083 , Zm00025a021439 , Zm00025a045837 , Zm00025a032250 , Zm00025a022816 , Zm00025a049510 , Zm00025a032042 , Zm00025a010237 , Zm00025a032750 , Zm00025a010642 , Zm00025a013555 , Zm00025a013554 , Zm00025a017913
Brachypodium KQK03428 , KQJ84016 , KQJ83644 , KQK01461 , KQK11942 , KQK00428 , KQK00718 , KQK16443 , KQK16441
Barley HORVU5Hr1G029550.1 , HORVU5Hr1G029550.2 , HORVU5Hr1G029550.3 , HORVU5Hr1G029550.4 , HORVU5Hr1G029550.5 , HORVU5Hr1G029550.6 , HORVU5Hr1G029550.7 , HORVU2Hr1G010990.4 , HORVU2Hr1G010990.3 , HORVU2Hr1G010990.2 , HORVU2Hr1G010990.1 , HORVU6Hr1G092960.12 , HORVU6Hr1G092960.13 , HORVU6Hr1G092960.10 , HORVU0Hr1G011280.6 , HORVU0Hr1G011280.4 , HORVU0Hr1G011280.5 , HORVU0Hr1G011280.2 , HORVU0Hr1G011280.3 , HORVU0Hr1G011280.1 , HORVU2Hr1G089940.14 , HORVU2Hr1G089940.15 , HORVU2Hr1G089940.16 , HORVU2Hr1G089940.17 , HORVU2Hr1G089940.10 , HORVU2Hr1G089940.11 , HORVU2Hr1G089940.12 , HORVU2Hr1G089940.13 , HORVU5Hr1G027240.4 , HORVU5Hr1G027240.5 , HORVU5Hr1G027240.2 , HORVU5Hr1G027240.3 , HORVU5Hr1G027240.1 , HORVU5Hr1G055200.7 , HORVU5Hr1G055200.6 , HORVU5Hr1G055200.5 , HORVU5Hr1G055200.4 , HORVU5Hr1G055200.3 , HORVU5Hr1G055200.2 , HORVU5Hr1G055200.1 , HORVU5Hr1G055200.8 , HORVU2Hr1G089940.20 , HORVU6Hr1G092960.4 , HORVU6Hr1G092960.5 , HORVU6Hr1G092960.6 , HORVU6Hr1G092960.7 , HORVU2Hr1G038740.16 , HORVU6Hr1G092960.1 , HORVU2Hr1G096360.15 , HORVU2Hr1G096360.16 , HORVU2Hr1G096360.10 , HORVU2Hr1G096360.11 , HORVU2Hr1G096360.12 , HORVU2Hr1G096360.13 , HORVU6Hr1G092970.3 , HORVU6Hr1G092970.2 , HORVU6Hr1G092970.4 , HORVU2Hr1G089940.18 , HORVU2Hr1G089940.19 , HORVU2Hr1G096360.6 , HORVU2Hr1G096360.7 , HORVU2Hr1G096360.4 , HORVU2Hr1G096360.5 , HORVU2Hr1G096360.2 , HORVU2Hr1G096360.3 , HORVU2Hr1G096360.1 , HORVU2Hr1G096360.8 , HORVU2Hr1G096360.9 , HORVU2Hr1G089940.6 , HORVU2Hr1G089940.7 , HORVU2Hr1G089940.4 , HORVU2Hr1G089940.5 , HORVU2Hr1G089940.2 , HORVU2Hr1G089940.3 , HORVU2Hr1G089940.1 , HORVU2Hr1G089940.8 , HORVU2Hr1G038740.8 , HORVU2Hr1G038740.1 , HORVU6Hr1G064140.5 , HORVU2Hr1G038740.3 , HORVU6Hr1G064140.3 , HORVU6Hr1G064140.2 , HORVU6Hr1G064140.1 , HORVU2Hr1G038740.12 , HORVU2Hr1G038740.10 , HORVU2Hr1G038740.11 , HORVU2Hr1G038740.2 , HORVU6Hr1G064140.4 , HORVU2Hr1G038740.14 , HORVU2Hr1G038740.15 , HORVU2Hr1G038740.18 , HORVU6Hr1G092960.9
Wheat TraesCS2D02G376100 , TraesCS5D02G185400 , TraesCS6B02G398000 , TraesCS2A02G198500 , TraesCS6B02G259000 , TraesCS2B02G605900 , TraesCS2D02G206300 , TraesCS6B02G279200 , TraesCS6D02G389400 , TraesCS6D02G227500 , TraesCS3D02G163400 , TraesCS6D02G212900 , TraesCS5B02G178700 , TraesCS6A02G405700 , TraesCS6B02G450000 , TraesCS2D02G404800 , TraesCS2B02G425600 , TraesCS5D02G112500 , TraesCS5A02G181000 , TraesCS2D02G376000 , TraesCS2D02G376000 , TraesCS5A02G100000 , TraesCS2A02G379900 , TraesCS2D02G404800 , TraesCS6B02G450200 , TraesCS6A02G222100 , TraesCS6A02G245100 , TraesCS2B02G396800 , TraesCS2B02G225900 , TraesCS2A02G407700 , TraesCS2A02G407700 , TraesCS2A02G065700 , TraesCS6A02G405600 , TraesCS6D02G389500 , TraesCS2D02G063900 , TraesCS2A02G379800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G216700 plant protein of unknown function domain containing protein, expressed -
2 Sobic.009G032900 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.010G139100 serine/threonine-protein kinase, putative, expressed -
4 Sobic.002G334000 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
5 Sobic.002G068000 expressed protein -
6 Sobic.010G158400 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
8 Sobic.002G392100 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.006G150100 Down-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
10 Sobic.001G238100 expansin precursor, putative, expressed -
11 Sobic.003G269900 OsSub12 - Putative Subtilisin homologue, expressed -
12 Sobic.005G080600 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
13 Sobic.003G046700 expressed protein -
14 Sobic.002G118900 auxin-induced protein 5NG4, putative, expressed -
15 Sobic.002G391400 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.009G259800 zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
17 Sobic.005G120900 expressed protein -
18 Sobic.003G349400 expressed protein -
19 Sobic.005G097600 gibberellin 20 oxidase 2, putative, expressed -
20 Sobic.002G115600 membrane protein, putative, expressed -


Gene co-expression network
sample Sobic004G351200 Sobic004G351200 Sobic005G216700 Sobic005G216700 Sobic004G351200--Sobic005G216700 Sobic009G032900 Sobic009G032900 Sobic004G351200--Sobic009G032900 Sobic010G139100 Sobic010G139100 Sobic004G351200--Sobic010G139100 Sobic002G334000 Sobic002G334000 Sobic004G351200--Sobic002G334000 Sobic002G068000 Sobic002G068000 Sobic004G351200--Sobic002G068000 Sobic010G158400 Sobic010G158400 Sobic004G351200--Sobic010G158400 Sobic007G206800 Sobic007G206800 Sobic004G351200--Sobic007G206800 Sobic002G392100 Sobic002G392100 Sobic004G351200--Sobic002G392100 Sobic006G150100 Sobic006G150100 Sobic004G351200--Sobic006G150100 Sobic005G216700--Sobic004G351200 Sobic005G216700--Sobic009G032900 Sobic005G216700--Sobic010G139100 Sobic005G216700--Sobic002G068000 Sobic005G216700--Sobic002G334000 Sobic005G216700--Sobic007G206800 Sobic005G216700--Sobic010G158400 Sobic005G080600 Sobic005G080600 Sobic005G216700--Sobic005G080600 Sobic003G046700 Sobic003G046700 Sobic005G216700--Sobic003G046700 Sobic009G032900--Sobic002G068000 Sobic009G032900--Sobic004G351200 Sobic009G032900--Sobic005G216700 Sobic009G032900--Sobic010G158400 Sobic009G032900--Sobic002G334000 Sobic009G032900--Sobic010G139100 Sobic009G032900--Sobic007G206800 Sobic009G032900--Sobic003G046700 Sobic003G269900 Sobic003G269900 Sobic009G032900--Sobic003G269900 Sobic010G139100--Sobic009G032900 Sobic010G139100--Sobic004G351200 Sobic010G139100--Sobic003G269900 Sobic010G139100--Sobic005G216700 Sobic006G135500 Sobic006G135500 Sobic010G139100--Sobic006G135500 Sobic004G323000 Sobic004G323000 Sobic010G139100--Sobic004G323000 Sobic010G115000 Sobic010G115000 Sobic010G139100--Sobic010G115000 Sobic010G174100 Sobic010G174100 Sobic010G139100--Sobic010G174100 Sobic010G139100--Sobic010G158400 Sobic002G334000--Sobic007G206800 Sobic002G334000--Sobic003G046700 Sobic010G191700 Sobic010G191700 Sobic002G334000--Sobic010G191700 Sobic002G391400 Sobic002G391400 Sobic002G334000--Sobic002G391400 Sobic010G241900 Sobic010G241900 Sobic002G334000--Sobic010G241900 Sobic007G220400 Sobic007G220400 Sobic002G334000--Sobic007G220400 Sobic001G238100 Sobic001G238100 Sobic002G334000--Sobic001G238100 Sobic005G226350 Sobic005G226350 Sobic002G334000--Sobic005G226350 Sobic010G128300 Sobic010G128300 Sobic002G334000--Sobic010G128300 Sobic002G068000--Sobic009G032900 Sobic003G349400 Sobic003G349400 Sobic002G068000--Sobic003G349400 Sobic002G068000--Sobic010G158400 Sobic010G234500 Sobic010G234500 Sobic002G068000--Sobic010G234500 Sobic002G068000--Sobic005G080600 Sobic009G259800 Sobic009G259800 Sobic002G068000--Sobic009G259800 Sobic003G426500 Sobic003G426500 Sobic002G068000--Sobic003G426500 Sobic002G068000--Sobic005G216700 Sobic010G066800 Sobic010G066800 Sobic002G068000--Sobic010G066800 Sobic010G158400--Sobic002G068000 Sobic010G158400--Sobic009G032900 Sobic010G158400--Sobic003G426500 Sobic010G158400--Sobic003G349400 Sobic010G158400--Sobic004G351200 Sobic003G185300 Sobic003G185300 Sobic010G158400--Sobic003G185300 Sobic010G158400--Sobic005G216700 Sobic010G158400--Sobic009G259800 Sobic010G158400--Sobic006G150100 Sobic007G206800--Sobic002G391400 Sobic007G206800--Sobic002G334000 Sobic007G206800--Sobic007G220400 Sobic007G206800--Sobic010G241900 Sobic007G206800--Sobic010G191700 Sobic006G205700 Sobic006G205700 Sobic007G206800--Sobic006G205700 Sobic007G206800--Sobic005G080600 Sobic002G111900 Sobic002G111900 Sobic007G206800--Sobic002G111900 Sobic007G206800--Sobic002G392100 Sobic002G392100--Sobic002G391400 Sobic002G392100--Sobic007G206800 Sobic002G392100--Sobic002G334000 Sobic007G086300 Sobic007G086300 Sobic002G392100--Sobic007G086300 Sobic002G392100--Sobic006G205700 Sobic008G034900 Sobic008G034900 Sobic002G392100--Sobic008G034900 Sobic003G167300 Sobic003G167300 Sobic002G392100--Sobic003G167300 Sobic002G392100--Sobic010G241900 Sobic001G499900 Sobic001G499900 Sobic002G392100--Sobic001G499900 Sobic006G150100--Sobic003G349400 Sobic005G127400 Sobic005G127400 Sobic006G150100--Sobic005G127400 Sobic002G003700 Sobic002G003700 Sobic006G150100--Sobic002G003700 Sobic004G110700 Sobic004G110700 Sobic006G150100--Sobic004G110700 Sobic006G170600 Sobic006G170600 Sobic006G150100--Sobic006G170600 Sobic006G150100--Sobic002G068000 Sobic006G150100--Sobic010G234500 Sobic006G150100--Sobic010G158400 Sobic006G225500 Sobic006G225500 Sobic006G150100--Sobic006G225500
Octagon: transcription factors


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