Gene annotation
Transcriptome id Sobic.005G120900.1
Synonym Sb05g017920
Functional annotation expressed protein
UniProt A0A1Z5RIG9
Pfam PF04578 PF13968
Panther DB PTHR31325 PTHR31325:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G45530 : Protein of unknown function (DUF594)
RAP-DB (Rice) LOC_Os02g33890.1 : expressed protein
MaizeGDB (Corn) Zm00025a015641 , Zm00025a015642
Brachypodium PNT65657 , KQJ90126
Barley HORVU6Hr1G002020.1
Wheat TraesCS6D02G006900 , TraesCS6B02G009700 , TraesCS6A02G004700 , TraesCS6A02G004700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -
2 Sobic.004G008600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
3 Sobic.003G046700 expressed protein -
4 Sobic.002G334000 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
5 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
6 Sobic.010G191700 cytochrome P450, putative, expressed -
7 Sobic.002G082000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@kelch repeat protein, putative, expressed -
8 Sobic.005G226350 - -
9 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
10 Sobic.005G216500 plant protein of unknown function domain containing protein, expressed -
11 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
12 Sobic.005G035900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
13 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
14 Sobic.006G059800 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
15 Sobic.002G111900 receptor-like kinase, putative, expressed -
16 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.002G391400 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.007G094100 OsWAK108 - OsWAK receptor-like protein kinase, expressed -


Gene co-expression network
sample Sobic005G120900 Sobic005G120900 Sobic010G269000 Sobic010G269000 Sobic005G120900--Sobic010G269000 Sobic004G008600 Sobic004G008600 Sobic005G120900--Sobic004G008600 Sobic003G046700 Sobic003G046700 Sobic005G120900--Sobic003G046700 Sobic002G334000 Sobic002G334000 Sobic005G120900--Sobic002G334000 Sobic005G134200 Sobic005G134200 Sobic005G120900--Sobic005G134200 Sobic010G191700 Sobic010G191700 Sobic005G120900--Sobic010G191700 Sobic002G082000 Sobic002G082000 Sobic005G120900--Sobic002G082000 Sobic005G226350 Sobic005G226350 Sobic005G120900--Sobic005G226350 Sobic010G241900 Sobic010G241900 Sobic005G120900--Sobic010G241900 Sobic010G269000--Sobic004G008600 Sobic010G269000--Sobic005G134200 Sobic010G269000--Sobic003G046700 Sobic010G269000--Sobic005G120900 Sobic005G216500 Sobic005G216500 Sobic010G269000--Sobic005G216500 Sobic010G269000--Sobic005G226350 Sobic007G220400 Sobic007G220400 Sobic010G269000--Sobic007G220400 Sobic005G226400 Sobic005G226400 Sobic010G269000--Sobic005G226400 Sobic010G269000--Sobic010G241900 Sobic004G008600--Sobic010G269000 Sobic004G008600--Sobic005G134200 Sobic004G008600--Sobic005G216500 Sobic004G008600--Sobic003G046700 Sobic004G008600--Sobic005G226350 Sobic004G008600--Sobic005G120900 Sobic004G008600--Sobic007G220400 Sobic004G008600--Sobic005G226400 Sobic004G008600--Sobic010G191700 Sobic003G046700--Sobic002G334000 Sobic003G046700--Sobic010G269000 Sobic003G046700--Sobic004G008600 Sobic003G046700--Sobic005G216500 Sobic003G046700--Sobic005G226350 Sobic003G046700--Sobic007G220400 Sobic003G046700--Sobic010G191700 Sobic009G018300 Sobic009G018300 Sobic003G046700--Sobic009G018300 Sobic003G046700--Sobic010G241900 Sobic007G206800 Sobic007G206800 Sobic002G334000--Sobic007G206800 Sobic002G334000--Sobic003G046700 Sobic002G334000--Sobic010G191700 Sobic002G391400 Sobic002G391400 Sobic002G334000--Sobic002G391400 Sobic002G334000--Sobic010G241900 Sobic002G334000--Sobic007G220400 Sobic001G238100 Sobic001G238100 Sobic002G334000--Sobic001G238100 Sobic002G334000--Sobic005G226350 Sobic010G128300 Sobic010G128300 Sobic002G334000--Sobic010G128300 Sobic005G134200--Sobic010G269000 Sobic005G134200--Sobic004G008600 Sobic005G134200--Sobic005G226400 Sobic002G391300 Sobic002G391300 Sobic005G134200--Sobic002G391300 Sobic005G134200--Sobic010G191700 Sobic005G134200--Sobic010G241900 Sobic005G134200--Sobic010G128300 Sobic005G134200--Sobic007G220400 Sobic006G047200 Sobic006G047200 Sobic005G134200--Sobic006G047200 Sobic010G191700--Sobic010G241900 Sobic002G111900 Sobic002G111900 Sobic010G191700--Sobic002G111900 Sobic010G191700--Sobic007G220400 Sobic010G191700--Sobic002G391300 Sobic010G191700--Sobic010G128300 Sobic010G191700--Sobic002G391400 Sobic003G441601 Sobic003G441601 Sobic010G191700--Sobic003G441601 Sobic010G191700--Sobic007G206800 Sobic010G191700--Sobic005G134200 Sobic002G029500 Sobic002G029500 Sobic002G082000--Sobic002G029500 Sobic002G082000--Sobic002G391300 Sobic002G082000--Sobic002G111900 Sobic002G082000--Sobic005G134200 Sobic002G082000--Sobic006G047200 Sobic006G059800 Sobic006G059800 Sobic002G082000--Sobic006G059800 Sobic002G289500 Sobic002G289500 Sobic002G082000--Sobic002G289500 Sobic006G171100 Sobic006G171100 Sobic002G082000--Sobic006G171100 Sobic005G035900 Sobic005G035900 Sobic002G082000--Sobic005G035900 Sobic005G226350--Sobic007G220400 Sobic005G226350--Sobic010G128300 Sobic005G226350--Sobic010G241900 Sobic005G226350--Sobic010G269000 Sobic005G226350--Sobic010G191700 Sobic005G226350--Sobic005G134200 Sobic005G226350--Sobic002G111900 Sobic005G226350--Sobic005G226400 Sobic005G226350--Sobic004G008600 Sobic010G241900--Sobic010G191700 Sobic010G241900--Sobic002G391400 Sobic010G241900--Sobic007G220400 Sobic010G241900--Sobic002G391300 Sobic010G241900--Sobic010G128300 Sobic010G241900--Sobic007G206800 Sobic010G241900--Sobic002G111900 Sobic010G241900--Sobic005G134200 Sobic010G241900--Sobic005G226350
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.