Gene annotation
Transcriptome id Sobic.004G008600.1
Synonym Sb04g000920
Functional annotation receptor protein kinase CLAVATA1 precursor, putative, expressed
UniProt C5XS73
Pfam PF08263 PF00069 PF13855
Panther DB PTHR27000 PTHR27000:SF42
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT4G28650 : Leucine-rich repeat transmembrane protein kinase family protein
RAP-DB (Rice) LOC_Os02g02140.1 : receptor protein kinase CLAVATA1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a018680 , Zm00025a050180 , Zm00025a006146 , Zm00025a001429 , Zm00025a029520 , Zm00025a030142 , Zm00025a053406 , Zm00025a000606
Brachypodium KQK22738 , KQJ95505 , KQK03573 , KQJ92865 , KQJ98144
Barley HORVU0Hr1G022670.4 , HORVU0Hr1G022670.1 , HORVU0Hr1G022670.3 , HORVU0Hr1G022670.2 , HORVU2Hr1G125360.11 , HORVU2Hr1G125360.10 , HORVU2Hr1G125360.14 , HORVU4Hr1G015710.3 , HORVU4Hr1G015710.2 , HORVU4Hr1G015710.4 , HORVU4Hr1G015710.5 , HORVU7Hr1G043620.1 , HORVU4Hr1G079040.2 , HORVU4Hr1G079040.1 , HORVU2Hr1G125360.3 , HORVU2Hr1G125360.6 , HORVU2Hr1G125360.5 , HORVU2Hr1G125360.4 , HORVU6Hr1G005460.1 , HORVU6Hr1G005460.2
Wheat TraesCS1D02G452700 , TraesCS1A02G444500 , TraesCS2D02G582300 , TraesCS4A02G224800 , TraesCS7A02G305700 , TraesCSU02G038500 , TraesCS1B02G479300 , TraesCS1B02G479300 , TraesCS2A02G570800 , TraesCS7B02G205900 , TraesCS7D02G302400 , TraesCS4D02G088400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -
2 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
3 Sobic.005G216500 plant protein of unknown function domain containing protein, expressed -
4 Sobic.003G046700 expressed protein -
5 Sobic.005G226350 - -
6 Sobic.005G120900 expressed protein -
7 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
8 Sobic.005G226400 RGH1A, putative, expressed -
9 Sobic.010G191700 cytochrome P450, putative, expressed -
10 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
11 Sobic.008G084900 D-mannose binding lectin family protein, expressed -
12 Sobic.002G334000 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
13 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.007G094100 OsWAK108 - OsWAK receptor-like protein kinase, expressed -
15 Sobic.009G018300 vrga1, putative, expressed -
16 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.002G111900 receptor-like kinase, putative, expressed -
18 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
19 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
20 Sobic.005G035900 PAN domain-containing protein At5g03700 precursor, putative, expressed -


Gene co-expression network
sample Sobic004G008600 Sobic004G008600 Sobic010G269000 Sobic010G269000 Sobic004G008600--Sobic010G269000 Sobic005G134200 Sobic005G134200 Sobic004G008600--Sobic005G134200 Sobic005G216500 Sobic005G216500 Sobic004G008600--Sobic005G216500 Sobic003G046700 Sobic003G046700 Sobic004G008600--Sobic003G046700 Sobic005G226350 Sobic005G226350 Sobic004G008600--Sobic005G226350 Sobic005G120900 Sobic005G120900 Sobic004G008600--Sobic005G120900 Sobic007G220400 Sobic007G220400 Sobic004G008600--Sobic007G220400 Sobic005G226400 Sobic005G226400 Sobic004G008600--Sobic005G226400 Sobic010G191700 Sobic010G191700 Sobic004G008600--Sobic010G191700 Sobic010G269000--Sobic004G008600 Sobic010G269000--Sobic005G134200 Sobic010G269000--Sobic003G046700 Sobic010G269000--Sobic005G120900 Sobic010G269000--Sobic005G216500 Sobic010G269000--Sobic005G226350 Sobic010G269000--Sobic007G220400 Sobic010G269000--Sobic005G226400 Sobic010G241900 Sobic010G241900 Sobic010G269000--Sobic010G241900 Sobic005G134200--Sobic010G269000 Sobic005G134200--Sobic004G008600 Sobic005G134200--Sobic005G226400 Sobic002G391300 Sobic002G391300 Sobic005G134200--Sobic002G391300 Sobic005G134200--Sobic010G191700 Sobic005G134200--Sobic010G241900 Sobic010G128300 Sobic010G128300 Sobic005G134200--Sobic010G128300 Sobic005G134200--Sobic007G220400 Sobic006G047200 Sobic006G047200 Sobic005G134200--Sobic006G047200 Sobic005G216500--Sobic004G008600 Sobic005G216500--Sobic010G269000 Sobic005G216500--Sobic003G046700 Sobic005G216500--Sobic005G134200 Sobic008G084900 Sobic008G084900 Sobic005G216500--Sobic008G084900 Sobic005G216500--Sobic007G220400 Sobic002G115600 Sobic002G115600 Sobic005G216500--Sobic002G115600 Sobic007G094100 Sobic007G094100 Sobic005G216500--Sobic007G094100 Sobic010G115000 Sobic010G115000 Sobic005G216500--Sobic010G115000 Sobic002G334000 Sobic002G334000 Sobic003G046700--Sobic002G334000 Sobic003G046700--Sobic010G269000 Sobic003G046700--Sobic004G008600 Sobic003G046700--Sobic005G216500 Sobic003G046700--Sobic005G226350 Sobic003G046700--Sobic007G220400 Sobic003G046700--Sobic010G191700 Sobic009G018300 Sobic009G018300 Sobic003G046700--Sobic009G018300 Sobic003G046700--Sobic010G241900 Sobic005G226350--Sobic007G220400 Sobic005G226350--Sobic010G128300 Sobic005G226350--Sobic010G241900 Sobic005G226350--Sobic010G269000 Sobic005G226350--Sobic010G191700 Sobic005G226350--Sobic005G134200 Sobic002G111900 Sobic002G111900 Sobic005G226350--Sobic002G111900 Sobic005G226350--Sobic005G226400 Sobic005G226350--Sobic004G008600 Sobic005G120900--Sobic010G269000 Sobic005G120900--Sobic004G008600 Sobic005G120900--Sobic003G046700 Sobic005G120900--Sobic002G334000 Sobic005G120900--Sobic005G134200 Sobic005G120900--Sobic010G191700 Sobic002G082000 Sobic002G082000 Sobic005G120900--Sobic002G082000 Sobic005G120900--Sobic005G226350 Sobic005G120900--Sobic010G241900 Sobic007G220400--Sobic010G241900 Sobic007G220400--Sobic010G191700 Sobic007G206800 Sobic007G206800 Sobic007G220400--Sobic007G206800 Sobic007G220400--Sobic002G111900 Sobic007G220400--Sobic005G226350 Sobic002G391400 Sobic002G391400 Sobic007G220400--Sobic002G391400 Sobic007G220400--Sobic005G134200 Sobic007G220400--Sobic010G128300 Sobic007G220400--Sobic002G334000 Sobic005G226400--Sobic005G134200 Sobic009G136800 Sobic009G136800 Sobic005G226400--Sobic009G136800 Sobic005G226400--Sobic010G128300 Sobic005G226400--Sobic002G391300 Sobic006G171100 Sobic006G171100 Sobic005G226400--Sobic006G171100 Sobic005G223700 Sobic005G223700 Sobic005G226400--Sobic005G223700 Sobic005G226400--Sobic006G047200 Sobic005G226400--Sobic005G226350 Sobic010G010000 Sobic010G010000 Sobic005G226400--Sobic010G010000 Sobic010G191700--Sobic010G241900 Sobic010G191700--Sobic002G111900 Sobic010G191700--Sobic007G220400 Sobic010G191700--Sobic002G391300 Sobic010G191700--Sobic010G128300 Sobic010G191700--Sobic002G391400 Sobic003G441601 Sobic003G441601 Sobic010G191700--Sobic003G441601 Sobic010G191700--Sobic007G206800 Sobic010G191700--Sobic005G134200
Octagon: transcription factors


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