Gene annotation
Transcriptome id Sobic.009G018300.1,Sobic.009G018300.2
Synonym Sb09g001730
Functional annotation vrga1, putative, expressed
UniProt A0A1B6P670 , A0A1Z5R0F0
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF582
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14470 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os05g34220.2 : vrga1, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G097550 - -
2 Sobic.001G233100 - -
3 Sobic.001G506100 Leucine-rich repeat transmembrane protein kinase("PubMedID : 26759170,PubMedID : 24597475")@receptor-like protein kinase 2 precursor, putative, expressed -
4 Sobic.009G004900 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
5 Sobic.003G046700 expressed protein -
6 Sobic.001G521600 Leucine-rich repeat family protein("PubMedID : 26759170,PubMedID : 24597475")@leucine-rich repeat family protein, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
7 Sobic.004G337950 - -
8 Sobic.004G009300 expressed protein -
9 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -
10 Sobic.004G119900 expansin precursor, putative, expressed -
11 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.005G226400 RGH1A, putative, expressed -
13 Sobic.005G205400 - -
14 Sobic.008G084800 major facilitator superfamily antiporter, putative, expressed -
15 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
16 Sobic.004G008600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
17 Sobic.005G226350 - -
18 Sobic.005G212800 carboxyl-terminal peptidase, putative, expressed -
19 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
20 Sobic.002G392000 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic009G018300 Sobic009G018300 Sobic007G097550 Sobic007G097550 Sobic009G018300--Sobic007G097550 Sobic001G233100 Sobic001G233100 Sobic009G018300--Sobic001G233100 Sobic001G506100 Sobic001G506100 Sobic009G018300--Sobic001G506100 Sobic009G004900 Sobic009G004900 Sobic009G018300--Sobic009G004900 Sobic003G046700 Sobic003G046700 Sobic009G018300--Sobic003G046700 Sobic001G521600 Sobic001G521600 Sobic009G018300--Sobic001G521600 Sobic004G337950 Sobic004G337950 Sobic009G018300--Sobic004G337950 Sobic004G009300 Sobic004G009300 Sobic009G018300--Sobic004G009300 Sobic010G269000 Sobic010G269000 Sobic009G018300--Sobic010G269000 Sobic007G097550--Sobic009G018300 Sobic007G097550--Sobic001G233100 Sobic005G212800 Sobic005G212800 Sobic007G097550--Sobic005G212800 Sobic008G084800 Sobic008G084800 Sobic007G097550--Sobic008G084800 Sobic005G205400 Sobic005G205400 Sobic007G097550--Sobic005G205400 Sobic001G234100 Sobic001G234100 Sobic007G097550--Sobic001G234100 Sobic007G097550--Sobic001G506100 Sobic007G097550--Sobic009G004900 Sobic006G178300 Sobic006G178300 Sobic007G097550--Sobic006G178300 Sobic001G233100--Sobic009G004900 Sobic001G233100--Sobic009G018300 Sobic001G233100--Sobic001G506100 Sobic001G233100--Sobic007G097550 Sobic004G119900 Sobic004G119900 Sobic001G233100--Sobic004G119900 Sobic010G128300 Sobic010G128300 Sobic001G233100--Sobic010G128300 Sobic005G226200 Sobic005G226200 Sobic001G233100--Sobic005G226200 Sobic005G226400 Sobic005G226400 Sobic001G233100--Sobic005G226400 Sobic002G392000 Sobic002G392000 Sobic001G233100--Sobic002G392000 Sobic001G506100--Sobic009G018300 Sobic001G506100--Sobic001G233100 Sobic001G506100--Sobic010G128300 Sobic001G506100--Sobic009G004900 Sobic001G506100--Sobic002G392000 Sobic001G506100--Sobic007G097550 Sobic001G506100--Sobic005G205400 Sobic001G506100--Sobic005G226200 Sobic001G506100--Sobic005G226400 Sobic009G004900--Sobic001G233100 Sobic009G004900--Sobic009G018300 Sobic009G004900--Sobic001G506100 Sobic009G004900--Sobic007G097550 Sobic009G004900--Sobic005G226400 Sobic009G004900--Sobic010G128300 Sobic009G004900--Sobic004G119900 Sobic004G120000 Sobic004G120000 Sobic009G004900--Sobic004G120000 Sobic002G409200 Sobic002G409200 Sobic009G004900--Sobic002G409200 Sobic002G334000 Sobic002G334000 Sobic003G046700--Sobic002G334000 Sobic003G046700--Sobic010G269000 Sobic004G008600 Sobic004G008600 Sobic003G046700--Sobic004G008600 Sobic005G216500 Sobic005G216500 Sobic003G046700--Sobic005G216500 Sobic005G226350 Sobic005G226350 Sobic003G046700--Sobic005G226350 Sobic007G220400 Sobic007G220400 Sobic003G046700--Sobic007G220400 Sobic010G191700 Sobic010G191700 Sobic003G046700--Sobic010G191700 Sobic003G046700--Sobic009G018300 Sobic010G241900 Sobic010G241900 Sobic003G046700--Sobic010G241900 Sobic001G521600--Sobic009G018300 Sobic001G521600--Sobic004G337950 Sobic001G521600--Sobic003G046700 Sobic001G521600--Sobic010G128300 Sobic001G521600--Sobic001G506100 Sobic001G521600--Sobic004G119900 Sobic001G521600--Sobic007G097550 Sobic001G521600--Sobic001G233100 Sobic005G134200 Sobic005G134200 Sobic001G521600--Sobic005G134200 Sobic004G337950--Sobic009G018300 Sobic004G337950--Sobic001G521600 Sobic004G337950--Sobic007G097550 Sobic004G337950--Sobic004G009300 Sobic004G337950--Sobic001G233100 Sobic007G094100 Sobic007G094100 Sobic004G337950--Sobic007G094100 Sobic004G337950--Sobic001G506100 Sobic004G337950--Sobic003G046700 Sobic004G337950--Sobic009G004900 Sobic004G009300--Sobic009G018300 Sobic002G392300 Sobic002G392300 Sobic004G009300--Sobic002G392300 Sobic004G009300--Sobic007G094100 Sobic004G009300--Sobic004G337950 Sobic006G135500 Sobic006G135500 Sobic004G009300--Sobic006G135500 Sobic004G009300--Sobic003G046700 Sobic004G009300--Sobic004G119900 Sobic004G009300--Sobic001G233100 Sobic004G009300--Sobic001G521600 Sobic010G269000--Sobic004G008600 Sobic010G269000--Sobic005G134200 Sobic010G269000--Sobic003G046700 Sobic005G120900 Sobic005G120900 Sobic010G269000--Sobic005G120900 Sobic010G269000--Sobic005G216500 Sobic010G269000--Sobic005G226350 Sobic010G269000--Sobic007G220400 Sobic010G269000--Sobic005G226400 Sobic010G269000--Sobic010G241900
Octagon: transcription factors


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