Gene annotation
Transcriptome id Sobic.004G119900.1
Synonym Sb04g010000, ATHEXPALPHA1.14, ATEXPA11, ATEXP11, EXP11, EXPA11
Functional annotation expansin precursor, putative, expressed
UniProt A0A1Z5RM11
Pfam PF03330 PF01357
Panther DB PTHR31867 PTHR31867:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20190 : expansin 11
RAP-DB (Rice) LOC_Os02g16800.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a023911 , Zm00025a027043 , Zm00025a043994 , Zm00025a019878 , Zm00025a019879 , Zm00025a008818 , Zm00025a024073 , Zm00025a019850 , Zm00025a019851 , Zm00025a019852 , Zm00025a019856 , Zm00025a019849 , Zm00025a016421 , Zm00025a053441
Brachypodium KQK05753 , KQK12421
Barley HORVU4Hr1G067850.2 , HORVU4Hr1G067850.3 , HORVU3Hr1G032290.1 , HORVU3Hr1G032290.2 , HORVU3Hr1G076670.2 , HORVU4Hr1G018460.5 , HORVU4Hr1G018460.4 , HORVU4Hr1G018460.1 , HORVU4Hr1G018460.3 , HORVU3Hr1G034030.4 , HORVU3Hr1G076640.2 , HORVU3Hr1G076640.3 , HORVU3Hr1G076640.1 , HORVU3Hr1G076640.4 , HORVU2Hr1G093690.1 , HORVU2Hr1G093690.2 , HORVU3Hr1G076670.1 , HORVU7Hr1G092600.1 , HORVU7Hr1G092600.2 , HORVU7Hr1G092600.3 , HORVU7Hr1G092600.4 , HORVU7Hr1G092600.5 , HORVU7Hr1G092600.6 , HORVU7Hr1G092600.7 , HORVU3Hr1G034030.3 , HORVU3Hr1G034030.2 , HORVU3Hr1G034030.1
Wheat TraesCS4D02G245900 , TraesCS3B02G348000 , TraesCS3D02G313200 , TraesCS3D02G313400 , TraesCS1D02G299700 , TraesCS1A02G300200 , TraesCS1A02G300200 , TraesCS4B02G246500 , TraesCS2B02G411700 , TraesCS3A02G317900 , TraesCS1B02G310300 , TraesCS3D02G167300 , TraesCS3D02G175800 , TraesCS7B02G293800 , TraesCS3B02G190700 , TraesCS6B02G336500 , TraesCS7D02G387400 , TraesCS7D02G387400 , TraesCS4D02G245800 , TraesCS3D02G313100 , TraesCS3A02G165900 , TraesCS3D02G176000 , TraesCS3B02G200100 , TraesCS3D02G313300 , TraesCS3A02G165600 , TraesCS3B02G199900 , TraesCS2D02G391600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G226400 RGH1A, putative, expressed -
2 Sobic.009G018300 vrga1, putative, expressed -
3 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
5 Sobic.001G233100 - -
6 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
7 Sobic.009G136800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
8 Sobic.002G392000 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.001G506100 Leucine-rich repeat transmembrane protein kinase("PubMedID : 26759170,PubMedID : 24597475")@receptor-like protein kinase 2 precursor, putative, expressed -
11 Sobic.009G004900 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
12 Sobic.005G205400 - -
13 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
14 Sobic.005G079100 dirigent, putative -
15 Sobic.006G171100 expansin precursor, putative, expressed -
16 Sobic.005G226350 - -
17 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -
18 Sobic.001G521600 Leucine-rich repeat family protein("PubMedID : 26759170,PubMedID : 24597475")@leucine-rich repeat family protein, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
19 Sobic.004G008600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
20 Sobic.007G097550 - -


Gene co-expression network
sample Sobic004G119900 Sobic004G119900 Sobic005G226400 Sobic005G226400 Sobic004G119900--Sobic005G226400 Sobic009G018300 Sobic009G018300 Sobic004G119900--Sobic009G018300 Sobic010G128300 Sobic010G128300 Sobic004G119900--Sobic010G128300 Sobic005G134200 Sobic005G134200 Sobic004G119900--Sobic005G134200 Sobic001G233100 Sobic001G233100 Sobic004G119900--Sobic001G233100 Sobic007G220400 Sobic007G220400 Sobic004G119900--Sobic007G220400 Sobic009G136800 Sobic009G136800 Sobic004G119900--Sobic009G136800 Sobic002G392000 Sobic002G392000 Sobic004G119900--Sobic002G392000 Sobic006G047200 Sobic006G047200 Sobic004G119900--Sobic006G047200 Sobic005G226400--Sobic005G134200 Sobic005G226400--Sobic009G136800 Sobic005G226400--Sobic010G128300 Sobic002G391300 Sobic002G391300 Sobic005G226400--Sobic002G391300 Sobic006G171100 Sobic006G171100 Sobic005G226400--Sobic006G171100 Sobic005G223700 Sobic005G223700 Sobic005G226400--Sobic005G223700 Sobic005G226400--Sobic006G047200 Sobic005G226350 Sobic005G226350 Sobic005G226400--Sobic005G226350 Sobic010G010000 Sobic010G010000 Sobic005G226400--Sobic010G010000 Sobic007G097550 Sobic007G097550 Sobic009G018300--Sobic007G097550 Sobic009G018300--Sobic001G233100 Sobic001G506100 Sobic001G506100 Sobic009G018300--Sobic001G506100 Sobic009G004900 Sobic009G004900 Sobic009G018300--Sobic009G004900 Sobic003G046700 Sobic003G046700 Sobic009G018300--Sobic003G046700 Sobic001G521600 Sobic001G521600 Sobic009G018300--Sobic001G521600 Sobic004G337950 Sobic004G337950 Sobic009G018300--Sobic004G337950 Sobic004G009300 Sobic004G009300 Sobic009G018300--Sobic004G009300 Sobic010G269000 Sobic010G269000 Sobic009G018300--Sobic010G269000 Sobic010G128300--Sobic002G392000 Sobic010G241900 Sobic010G241900 Sobic010G128300--Sobic010G241900 Sobic010G191700 Sobic010G191700 Sobic010G128300--Sobic010G191700 Sobic010G128300--Sobic002G391300 Sobic010G128300--Sobic005G226400 Sobic010G128300--Sobic005G226350 Sobic010G128300--Sobic005G134200 Sobic010G128300--Sobic009G136800 Sobic010G128300--Sobic007G220400 Sobic005G134200--Sobic010G269000 Sobic004G008600 Sobic004G008600 Sobic005G134200--Sobic004G008600 Sobic005G134200--Sobic005G226400 Sobic005G134200--Sobic002G391300 Sobic005G134200--Sobic010G191700 Sobic005G134200--Sobic010G241900 Sobic005G134200--Sobic010G128300 Sobic005G134200--Sobic007G220400 Sobic005G134200--Sobic006G047200 Sobic001G233100--Sobic009G004900 Sobic001G233100--Sobic009G018300 Sobic001G233100--Sobic001G506100 Sobic001G233100--Sobic007G097550 Sobic001G233100--Sobic004G119900 Sobic001G233100--Sobic010G128300 Sobic005G226200 Sobic005G226200 Sobic001G233100--Sobic005G226200 Sobic001G233100--Sobic005G226400 Sobic001G233100--Sobic002G392000 Sobic007G220400--Sobic010G241900 Sobic007G220400--Sobic010G191700 Sobic007G206800 Sobic007G206800 Sobic007G220400--Sobic007G206800 Sobic002G111900 Sobic002G111900 Sobic007G220400--Sobic002G111900 Sobic007G220400--Sobic005G226350 Sobic002G391400 Sobic002G391400 Sobic007G220400--Sobic002G391400 Sobic007G220400--Sobic005G134200 Sobic007G220400--Sobic010G128300 Sobic002G334000 Sobic002G334000 Sobic007G220400--Sobic002G334000 Sobic009G136800--Sobic006G171100 Sobic009G136800--Sobic002G391300 Sobic009G136800--Sobic005G226400 Sobic009G136800--Sobic010G010000 Sobic002G063700 Sobic002G063700 Sobic009G136800--Sobic002G063700 Sobic009G136800--Sobic010G128300 Sobic009G136800--Sobic006G047200 Sobic009G136800--Sobic002G392000 Sobic002G289500 Sobic002G289500 Sobic009G136800--Sobic002G289500 Sobic002G392000--Sobic010G128300 Sobic005G205400 Sobic005G205400 Sobic002G392000--Sobic005G205400 Sobic002G392000--Sobic006G047200 Sobic001G499900 Sobic001G499900 Sobic002G392000--Sobic001G499900 Sobic002G392000--Sobic009G136800 Sobic008G084800 Sobic008G084800 Sobic002G392000--Sobic008G084800 Sobic002G392000--Sobic010G191700 Sobic002G392000--Sobic010G241900 Sobic002G392000--Sobic002G391300 Sobic005G035900 Sobic005G035900 Sobic006G047200--Sobic005G035900 Sobic006G047200--Sobic005G205400 Sobic006G047200--Sobic008G084800 Sobic006G047200--Sobic002G392000 Sobic001G234100 Sobic001G234100 Sobic006G047200--Sobic001G234100 Sobic005G101000 Sobic005G101000 Sobic006G047200--Sobic005G101000 Sobic006G047200--Sobic009G136800 Sobic006G047200--Sobic010G241900 Sobic006G047200--Sobic005G134200
Octagon: transcription factors


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