Gene annotation
Transcriptome id Sobic.009G004900.8,Sobic.009G004900.7,Sobic.009G004900.4
Synonym RLK6, Sb09g000636, CRK5
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1B6P5L4
Pfam PF00635 PF00069
Panther DB PTHR27002 PTHR27002:SF153
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K04730; interleukin-1 receptor-associated kinase 1
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G23130 : cysteine-rich RLK (RECEPTOR-like protein kinase) 5
RAP-DB (Rice) LOC_Os11g39450.1 : cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS7D02G503700 , TraesCS7D02G503700 , TraesCS2D02G024900 , TraesCS6B02G004100 , TraesCSU02G008100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G233100 - -
2 Sobic.009G018300 vrga1, putative, expressed -
3 Sobic.001G506100 Leucine-rich repeat transmembrane protein kinase("PubMedID : 26759170,PubMedID : 24597475")@receptor-like protein kinase 2 precursor, putative, expressed -
4 Sobic.007G097550 - -
5 Sobic.005G226400 RGH1A, putative, expressed -
6 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.004G119900 expansin precursor, putative, expressed -
8 Sobic.004G120000 expansin precursor, putative, expressed -
9 Sobic.002G409200 TKL_IRAK_DUF26-lh.9 - DUF26 kinases have homology to DUF26 containing loci, expressed -
10 Sobic.005G205400 - -
11 Sobic.002G063700 NB-ARC domain containing protein, expressed -
12 Sobic.002G392000 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.005G226200 SAM dependent carboxyl methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
14 Sobic.005G212800 carboxyl-terminal peptidase, putative, expressed -
15 Sobic.009G136800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
16 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
17 Sobic.005G226350 - -
18 Sobic.004G337950 - -
19 Sobic.001G521600 Leucine-rich repeat family protein("PubMedID : 26759170,PubMedID : 24597475")@leucine-rich repeat family protein, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
20 Sobic.001G234100 expressed protein -


Gene co-expression network
sample Sobic009G004900 Sobic009G004900 Sobic001G233100 Sobic001G233100 Sobic009G004900--Sobic001G233100 Sobic009G018300 Sobic009G018300 Sobic009G004900--Sobic009G018300 Sobic001G506100 Sobic001G506100 Sobic009G004900--Sobic001G506100 Sobic007G097550 Sobic007G097550 Sobic009G004900--Sobic007G097550 Sobic005G226400 Sobic005G226400 Sobic009G004900--Sobic005G226400 Sobic010G128300 Sobic010G128300 Sobic009G004900--Sobic010G128300 Sobic004G119900 Sobic004G119900 Sobic009G004900--Sobic004G119900 Sobic004G120000 Sobic004G120000 Sobic009G004900--Sobic004G120000 Sobic002G409200 Sobic002G409200 Sobic009G004900--Sobic002G409200 Sobic001G233100--Sobic009G004900 Sobic001G233100--Sobic009G018300 Sobic001G233100--Sobic001G506100 Sobic001G233100--Sobic007G097550 Sobic001G233100--Sobic004G119900 Sobic001G233100--Sobic010G128300 Sobic005G226200 Sobic005G226200 Sobic001G233100--Sobic005G226200 Sobic001G233100--Sobic005G226400 Sobic002G392000 Sobic002G392000 Sobic001G233100--Sobic002G392000 Sobic009G018300--Sobic007G097550 Sobic009G018300--Sobic001G233100 Sobic009G018300--Sobic001G506100 Sobic009G018300--Sobic009G004900 Sobic003G046700 Sobic003G046700 Sobic009G018300--Sobic003G046700 Sobic001G521600 Sobic001G521600 Sobic009G018300--Sobic001G521600 Sobic004G337950 Sobic004G337950 Sobic009G018300--Sobic004G337950 Sobic004G009300 Sobic004G009300 Sobic009G018300--Sobic004G009300 Sobic010G269000 Sobic010G269000 Sobic009G018300--Sobic010G269000 Sobic001G506100--Sobic009G018300 Sobic001G506100--Sobic001G233100 Sobic001G506100--Sobic010G128300 Sobic001G506100--Sobic009G004900 Sobic001G506100--Sobic002G392000 Sobic001G506100--Sobic007G097550 Sobic005G205400 Sobic005G205400 Sobic001G506100--Sobic005G205400 Sobic001G506100--Sobic005G226200 Sobic001G506100--Sobic005G226400 Sobic007G097550--Sobic009G018300 Sobic007G097550--Sobic001G233100 Sobic005G212800 Sobic005G212800 Sobic007G097550--Sobic005G212800 Sobic008G084800 Sobic008G084800 Sobic007G097550--Sobic008G084800 Sobic007G097550--Sobic005G205400 Sobic001G234100 Sobic001G234100 Sobic007G097550--Sobic001G234100 Sobic007G097550--Sobic001G506100 Sobic007G097550--Sobic009G004900 Sobic006G178300 Sobic006G178300 Sobic007G097550--Sobic006G178300 Sobic005G134200 Sobic005G134200 Sobic005G226400--Sobic005G134200 Sobic009G136800 Sobic009G136800 Sobic005G226400--Sobic009G136800 Sobic005G226400--Sobic010G128300 Sobic002G391300 Sobic002G391300 Sobic005G226400--Sobic002G391300 Sobic006G171100 Sobic006G171100 Sobic005G226400--Sobic006G171100 Sobic005G223700 Sobic005G223700 Sobic005G226400--Sobic005G223700 Sobic006G047200 Sobic006G047200 Sobic005G226400--Sobic006G047200 Sobic005G226350 Sobic005G226350 Sobic005G226400--Sobic005G226350 Sobic010G010000 Sobic010G010000 Sobic005G226400--Sobic010G010000 Sobic010G128300--Sobic002G392000 Sobic010G241900 Sobic010G241900 Sobic010G128300--Sobic010G241900 Sobic010G191700 Sobic010G191700 Sobic010G128300--Sobic010G191700 Sobic010G128300--Sobic002G391300 Sobic010G128300--Sobic005G226400 Sobic010G128300--Sobic005G226350 Sobic010G128300--Sobic005G134200 Sobic010G128300--Sobic009G136800 Sobic007G220400 Sobic007G220400 Sobic010G128300--Sobic007G220400 Sobic004G119900--Sobic005G226400 Sobic004G119900--Sobic009G018300 Sobic004G119900--Sobic010G128300 Sobic004G119900--Sobic005G134200 Sobic004G119900--Sobic001G233100 Sobic004G119900--Sobic007G220400 Sobic004G119900--Sobic009G136800 Sobic004G119900--Sobic002G392000 Sobic004G119900--Sobic006G047200 Sobic004G120000--Sobic009G004900 Sobic004G120000--Sobic010G128300 Sobic004G120000--Sobic004G119900 Sobic004G120000--Sobic005G226400 Sobic004G120000--Sobic001G233100 Sobic002G063700 Sobic002G063700 Sobic004G120000--Sobic002G063700 Sobic004G120000--Sobic005G226350 Sobic004G120000--Sobic009G136800 Sobic004G120000--Sobic005G134200 Sobic002G409200--Sobic002G063700 Sobic002G409200--Sobic002G392000 Sobic002G409200--Sobic009G004900 Sobic002G409200--Sobic010G128300 Sobic005G069332 Sobic005G069332 Sobic002G409200--Sobic005G069332 Sobic002G409200--Sobic001G233100 Sobic002G409200--Sobic009G136800 Sobic002G409200--Sobic005G226400 Sobic002G409200--Sobic001G506100
Octagon: transcription factors


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