Gene annotation
Transcriptome id Sobic.004G120000.1
Synonym ATHEXPALPHA1.14, ATEXPA11, ATEXP11, EXP11, Sb04g010010, EXPA11
Functional annotation expansin precursor, putative, expressed
UniProt C5XZM2
Pfam PF01357
Panther DB PTHR31867 PTHR31867:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20190 : expansin 11
RAP-DB (Rice) LOC_Os02g16800.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a019879 , Zm00025a019850 , Zm00025a019851 , Zm00025a019852 , Zm00025a019849 , Zm00025a053441
Brachypodium KQJ96857 , KQJ96854 , KQJ94333 , KQJ94332
Barley HORVU4Hr1G018460.5 , HORVU4Hr1G018460.4 , HORVU4Hr1G018460.1 , HORVU4Hr1G018460.3 , HORVU4Hr1G018460.2 , HORVU7Hr1G092600.1 , HORVU7Hr1G092600.2 , HORVU7Hr1G092600.3
Wheat TraesCS7D02G387400 , TraesCS7D02G387400 , TraesCS7D02G484600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G004900 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
2 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.004G119900 expansin precursor, putative, expressed -
4 Sobic.005G226400 RGH1A, putative, expressed -
5 Sobic.001G233100 - -
6 Sobic.002G063700 NB-ARC domain containing protein, expressed -
7 Sobic.005G226350 - -
8 Sobic.009G136800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
9 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
10 Sobic.005G226200 SAM dependent carboxyl methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
11 Sobic.001G506100 Leucine-rich repeat transmembrane protein kinase("PubMedID : 26759170,PubMedID : 24597475")@receptor-like protein kinase 2 precursor, putative, expressed -
12 Sobic.003G441601 - -
13 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.007G119750 - -
15 Sobic.009G018300 vrga1, putative, expressed -
16 Sobic.005G080600 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
17 Sobic.002G409200 TKL_IRAK_DUF26-lh.9 - DUF26 kinases have homology to DUF26 containing loci, expressed -
18 Sobic.003G046700 expressed protein -
19 Sobic.004G008600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
20 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -


Gene co-expression network
sample Sobic004G120000 Sobic004G120000 Sobic009G004900 Sobic009G004900 Sobic004G120000--Sobic009G004900 Sobic010G128300 Sobic010G128300 Sobic004G120000--Sobic010G128300 Sobic004G119900 Sobic004G119900 Sobic004G120000--Sobic004G119900 Sobic005G226400 Sobic005G226400 Sobic004G120000--Sobic005G226400 Sobic001G233100 Sobic001G233100 Sobic004G120000--Sobic001G233100 Sobic002G063700 Sobic002G063700 Sobic004G120000--Sobic002G063700 Sobic005G226350 Sobic005G226350 Sobic004G120000--Sobic005G226350 Sobic009G136800 Sobic009G136800 Sobic004G120000--Sobic009G136800 Sobic005G134200 Sobic005G134200 Sobic004G120000--Sobic005G134200 Sobic009G004900--Sobic001G233100 Sobic009G018300 Sobic009G018300 Sobic009G004900--Sobic009G018300 Sobic001G506100 Sobic001G506100 Sobic009G004900--Sobic001G506100 Sobic007G097550 Sobic007G097550 Sobic009G004900--Sobic007G097550 Sobic009G004900--Sobic005G226400 Sobic009G004900--Sobic010G128300 Sobic009G004900--Sobic004G119900 Sobic009G004900--Sobic004G120000 Sobic002G409200 Sobic002G409200 Sobic009G004900--Sobic002G409200 Sobic002G392000 Sobic002G392000 Sobic010G128300--Sobic002G392000 Sobic010G241900 Sobic010G241900 Sobic010G128300--Sobic010G241900 Sobic010G191700 Sobic010G191700 Sobic010G128300--Sobic010G191700 Sobic002G391300 Sobic002G391300 Sobic010G128300--Sobic002G391300 Sobic010G128300--Sobic005G226400 Sobic010G128300--Sobic005G226350 Sobic010G128300--Sobic005G134200 Sobic010G128300--Sobic009G136800 Sobic007G220400 Sobic007G220400 Sobic010G128300--Sobic007G220400 Sobic004G119900--Sobic005G226400 Sobic004G119900--Sobic009G018300 Sobic004G119900--Sobic010G128300 Sobic004G119900--Sobic005G134200 Sobic004G119900--Sobic001G233100 Sobic004G119900--Sobic007G220400 Sobic004G119900--Sobic009G136800 Sobic004G119900--Sobic002G392000 Sobic006G047200 Sobic006G047200 Sobic004G119900--Sobic006G047200 Sobic005G226400--Sobic005G134200 Sobic005G226400--Sobic009G136800 Sobic005G226400--Sobic010G128300 Sobic005G226400--Sobic002G391300 Sobic006G171100 Sobic006G171100 Sobic005G226400--Sobic006G171100 Sobic005G223700 Sobic005G223700 Sobic005G226400--Sobic005G223700 Sobic005G226400--Sobic006G047200 Sobic005G226400--Sobic005G226350 Sobic010G010000 Sobic010G010000 Sobic005G226400--Sobic010G010000 Sobic001G233100--Sobic009G004900 Sobic001G233100--Sobic009G018300 Sobic001G233100--Sobic001G506100 Sobic001G233100--Sobic007G097550 Sobic001G233100--Sobic004G119900 Sobic001G233100--Sobic010G128300 Sobic005G226200 Sobic005G226200 Sobic001G233100--Sobic005G226200 Sobic001G233100--Sobic005G226400 Sobic001G233100--Sobic002G392000 Sobic009G055300 Sobic009G055300 Sobic002G063700--Sobic009G055300 Sobic001G153100 Sobic001G153100 Sobic002G063700--Sobic001G153100 Sobic001G415100 Sobic001G415100 Sobic002G063700--Sobic001G415100 Sobic005G069332 Sobic005G069332 Sobic002G063700--Sobic005G069332 Sobic002G063700--Sobic009G136800 Sobic005G069166 Sobic005G069166 Sobic002G063700--Sobic005G069166 Sobic006G230100 Sobic006G230100 Sobic002G063700--Sobic006G230100 Sobic006G230200 Sobic006G230200 Sobic002G063700--Sobic006G230200 Sobic002G063700--Sobic010G128300 Sobic005G226350--Sobic007G220400 Sobic005G226350--Sobic010G128300 Sobic005G226350--Sobic010G241900 Sobic010G269000 Sobic010G269000 Sobic005G226350--Sobic010G269000 Sobic005G226350--Sobic010G191700 Sobic005G226350--Sobic005G134200 Sobic002G111900 Sobic002G111900 Sobic005G226350--Sobic002G111900 Sobic005G226350--Sobic005G226400 Sobic004G008600 Sobic004G008600 Sobic005G226350--Sobic004G008600 Sobic009G136800--Sobic006G171100 Sobic009G136800--Sobic002G391300 Sobic009G136800--Sobic005G226400 Sobic009G136800--Sobic010G010000 Sobic009G136800--Sobic002G063700 Sobic009G136800--Sobic010G128300 Sobic009G136800--Sobic006G047200 Sobic009G136800--Sobic002G392000 Sobic002G289500 Sobic002G289500 Sobic009G136800--Sobic002G289500 Sobic005G134200--Sobic010G269000 Sobic005G134200--Sobic004G008600 Sobic005G134200--Sobic005G226400 Sobic005G134200--Sobic002G391300 Sobic005G134200--Sobic010G191700 Sobic005G134200--Sobic010G241900 Sobic005G134200--Sobic010G128300 Sobic005G134200--Sobic007G220400 Sobic005G134200--Sobic006G047200
Octagon: transcription factors


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