Gene annotation
Transcriptome id Sobic.001G506100.1
Synonym Sb01g047250
Functional annotation Leucine-rich repeat transmembrane protein kinase( (PubMedID : 26759170,(PubMedID : 24597475)
receptor-like protein kinase 2 precursor, putative, expressed
UniProt C5WY01
Pfam PF08263 PF00069
Panther DB PTHR27000 PTHR27000:SF99
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G28650 : Leucine-rich repeat transmembrane protein kinase family protein
RAP-DB (Rice) LOC_Os03g05140.1 : receptor-like protein kinase 2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a018680 , Zm00025a053406 , Zm00025a000606
Brachypodium KQK23692
Barley HORVU5Hr1G068950.1 , HORVU6Hr1G053450.1 , HORVU4Hr1G015710.3 , HORVU4Hr1G015710.4 , HORVU4Hr1G079040.2 , HORVU4Hr1G079040.1 , HORVU4Hr1G020000.1 , HORVU6Hr1G005460.1 , HORVU6Hr1G005460.2
Wheat TraesCS4D02G109000 , TraesCS1D02G452700 , TraesCS1A02G444500 , TraesCS4A02G224800 , TraesCS1B02G479300 , TraesCS1B02G479300 , TraesCS4A02G207800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G018300 vrga1, putative, expressed -
2 Sobic.001G233100 - -
3 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.009G004900 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
5 Sobic.002G392000 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.007G097550 - -
7 Sobic.005G205400 - -
8 Sobic.005G226200 SAM dependent carboxyl methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
9 Sobic.005G226400 RGH1A, putative, expressed -
10 Sobic.003G046700 expressed protein -
11 Sobic.005G226350 - -
12 Sobic.004G119900 expansin precursor, putative, expressed -
13 Sobic.008G084800 major facilitator superfamily antiporter, putative, expressed -
14 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
15 Sobic.002G334000 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
16 Sobic.001G521600 Leucine-rich repeat family protein("PubMedID : 26759170,PubMedID : 24597475")@leucine-rich repeat family protein, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
17 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -
18 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
19 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
20 Sobic.010G191700 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic001G506100 Sobic001G506100 Sobic009G018300 Sobic009G018300 Sobic001G506100--Sobic009G018300 Sobic001G233100 Sobic001G233100 Sobic001G506100--Sobic001G233100 Sobic010G128300 Sobic010G128300 Sobic001G506100--Sobic010G128300 Sobic009G004900 Sobic009G004900 Sobic001G506100--Sobic009G004900 Sobic002G392000 Sobic002G392000 Sobic001G506100--Sobic002G392000 Sobic007G097550 Sobic007G097550 Sobic001G506100--Sobic007G097550 Sobic005G205400 Sobic005G205400 Sobic001G506100--Sobic005G205400 Sobic005G226200 Sobic005G226200 Sobic001G506100--Sobic005G226200 Sobic005G226400 Sobic005G226400 Sobic001G506100--Sobic005G226400 Sobic009G018300--Sobic007G097550 Sobic009G018300--Sobic001G233100 Sobic009G018300--Sobic001G506100 Sobic009G018300--Sobic009G004900 Sobic003G046700 Sobic003G046700 Sobic009G018300--Sobic003G046700 Sobic001G521600 Sobic001G521600 Sobic009G018300--Sobic001G521600 Sobic004G337950 Sobic004G337950 Sobic009G018300--Sobic004G337950 Sobic004G009300 Sobic004G009300 Sobic009G018300--Sobic004G009300 Sobic010G269000 Sobic010G269000 Sobic009G018300--Sobic010G269000 Sobic001G233100--Sobic009G004900 Sobic001G233100--Sobic009G018300 Sobic001G233100--Sobic001G506100 Sobic001G233100--Sobic007G097550 Sobic004G119900 Sobic004G119900 Sobic001G233100--Sobic004G119900 Sobic001G233100--Sobic010G128300 Sobic001G233100--Sobic005G226200 Sobic001G233100--Sobic005G226400 Sobic001G233100--Sobic002G392000 Sobic010G128300--Sobic002G392000 Sobic010G241900 Sobic010G241900 Sobic010G128300--Sobic010G241900 Sobic010G191700 Sobic010G191700 Sobic010G128300--Sobic010G191700 Sobic002G391300 Sobic002G391300 Sobic010G128300--Sobic002G391300 Sobic010G128300--Sobic005G226400 Sobic005G226350 Sobic005G226350 Sobic010G128300--Sobic005G226350 Sobic005G134200 Sobic005G134200 Sobic010G128300--Sobic005G134200 Sobic009G136800 Sobic009G136800 Sobic010G128300--Sobic009G136800 Sobic007G220400 Sobic007G220400 Sobic010G128300--Sobic007G220400 Sobic009G004900--Sobic001G233100 Sobic009G004900--Sobic009G018300 Sobic009G004900--Sobic001G506100 Sobic009G004900--Sobic007G097550 Sobic009G004900--Sobic005G226400 Sobic009G004900--Sobic010G128300 Sobic009G004900--Sobic004G119900 Sobic004G120000 Sobic004G120000 Sobic009G004900--Sobic004G120000 Sobic002G409200 Sobic002G409200 Sobic009G004900--Sobic002G409200 Sobic002G392000--Sobic010G128300 Sobic002G392000--Sobic005G205400 Sobic006G047200 Sobic006G047200 Sobic002G392000--Sobic006G047200 Sobic001G499900 Sobic001G499900 Sobic002G392000--Sobic001G499900 Sobic002G392000--Sobic009G136800 Sobic008G084800 Sobic008G084800 Sobic002G392000--Sobic008G084800 Sobic002G392000--Sobic010G191700 Sobic002G392000--Sobic010G241900 Sobic002G392000--Sobic002G391300 Sobic007G097550--Sobic009G018300 Sobic007G097550--Sobic001G233100 Sobic005G212800 Sobic005G212800 Sobic007G097550--Sobic005G212800 Sobic007G097550--Sobic008G084800 Sobic007G097550--Sobic005G205400 Sobic001G234100 Sobic001G234100 Sobic007G097550--Sobic001G234100 Sobic007G097550--Sobic001G506100 Sobic007G097550--Sobic009G004900 Sobic006G178300 Sobic006G178300 Sobic007G097550--Sobic006G178300 Sobic005G205400--Sobic008G084800 Sobic005G205400--Sobic001G234100 Sobic005G205400--Sobic006G047200 Sobic005G205400--Sobic002G392000 Sobic005G205400--Sobic005G212800 Sobic005G101000 Sobic005G101000 Sobic005G205400--Sobic005G101000 Sobic005G205400--Sobic010G128300 Sobic001G153100 Sobic001G153100 Sobic005G205400--Sobic001G153100 Sobic008G058600 Sobic008G058600 Sobic005G205400--Sobic008G058600 Sobic005G226200--Sobic001G506100 Sobic005G226200--Sobic010G128300 Sobic005G226200--Sobic001G233100 Sobic005G226200--Sobic003G046700 Sobic005G226200--Sobic009G018300 Sobic005G226200--Sobic009G004900 Sobic005G226200--Sobic001G521600 Sobic005G226200--Sobic002G392000 Sobic002G334000 Sobic002G334000 Sobic005G226200--Sobic002G334000 Sobic005G226400--Sobic005G134200 Sobic005G226400--Sobic009G136800 Sobic005G226400--Sobic010G128300 Sobic005G226400--Sobic002G391300 Sobic006G171100 Sobic006G171100 Sobic005G226400--Sobic006G171100 Sobic005G223700 Sobic005G223700 Sobic005G226400--Sobic005G223700 Sobic005G226400--Sobic006G047200 Sobic005G226400--Sobic005G226350 Sobic010G010000 Sobic010G010000 Sobic005G226400--Sobic010G010000
Octagon: transcription factors


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