Gene annotation
Transcriptome id Sobic.005G226200.1
Synonym JMT, Sb05g027465
Functional annotation SAM dependent carboxyl methyltransferase, putative, expressed
UniProt A0A1B6PU57
Pfam PF03492
Panther DB PTHR31009 PTHR31009:SF12
NCBI CDD -
KEGG Orthology K08241; jasmonate O-methyltransferase
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT4G36470 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os06g20920.1 : SAM dependent carboxyl methyltransferase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G506100 Leucine-rich repeat transmembrane protein kinase("PubMedID : 26759170,PubMedID : 24597475")@receptor-like protein kinase 2 precursor, putative, expressed -
2 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.001G233100 - -
4 Sobic.003G046700 expressed protein -
5 Sobic.009G018300 vrga1, putative, expressed -
6 Sobic.009G004900 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
7 Sobic.001G521600 Leucine-rich repeat family protein("PubMedID : 26759170,PubMedID : 24597475")@leucine-rich repeat family protein, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
8 Sobic.002G392000 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.002G334000 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
10 Sobic.010G191700 cytochrome P450, putative, expressed -
11 Sobic.001G499900 expansin precursor, putative, expressed -
12 Sobic.005G205400 - -
13 Sobic.005G226350 - -
14 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
15 Sobic.007G097550 - -
16 Sobic.004G337950 - -
17 Sobic.006G135500 glyoxal oxidase-related, putative, expressed -
18 Sobic.004G120000 expansin precursor, putative, expressed -
19 Sobic.001G238100 expansin precursor, putative, expressed -
20 Sobic.002G409200 TKL_IRAK_DUF26-lh.9 - DUF26 kinases have homology to DUF26 containing loci, expressed -


Gene co-expression network
sample Sobic005G226200 Sobic005G226200 Sobic001G506100 Sobic001G506100 Sobic005G226200--Sobic001G506100 Sobic010G128300 Sobic010G128300 Sobic005G226200--Sobic010G128300 Sobic001G233100 Sobic001G233100 Sobic005G226200--Sobic001G233100 Sobic003G046700 Sobic003G046700 Sobic005G226200--Sobic003G046700 Sobic009G018300 Sobic009G018300 Sobic005G226200--Sobic009G018300 Sobic009G004900 Sobic009G004900 Sobic005G226200--Sobic009G004900 Sobic001G521600 Sobic001G521600 Sobic005G226200--Sobic001G521600 Sobic002G392000 Sobic002G392000 Sobic005G226200--Sobic002G392000 Sobic002G334000 Sobic002G334000 Sobic005G226200--Sobic002G334000 Sobic001G506100--Sobic009G018300 Sobic001G506100--Sobic001G233100 Sobic001G506100--Sobic010G128300 Sobic001G506100--Sobic009G004900 Sobic001G506100--Sobic002G392000 Sobic007G097550 Sobic007G097550 Sobic001G506100--Sobic007G097550 Sobic005G205400 Sobic005G205400 Sobic001G506100--Sobic005G205400 Sobic001G506100--Sobic005G226200 Sobic005G226400 Sobic005G226400 Sobic001G506100--Sobic005G226400 Sobic010G128300--Sobic002G392000 Sobic010G241900 Sobic010G241900 Sobic010G128300--Sobic010G241900 Sobic010G191700 Sobic010G191700 Sobic010G128300--Sobic010G191700 Sobic002G391300 Sobic002G391300 Sobic010G128300--Sobic002G391300 Sobic010G128300--Sobic005G226400 Sobic005G226350 Sobic005G226350 Sobic010G128300--Sobic005G226350 Sobic005G134200 Sobic005G134200 Sobic010G128300--Sobic005G134200 Sobic009G136800 Sobic009G136800 Sobic010G128300--Sobic009G136800 Sobic007G220400 Sobic007G220400 Sobic010G128300--Sobic007G220400 Sobic001G233100--Sobic009G004900 Sobic001G233100--Sobic009G018300 Sobic001G233100--Sobic001G506100 Sobic001G233100--Sobic007G097550 Sobic004G119900 Sobic004G119900 Sobic001G233100--Sobic004G119900 Sobic001G233100--Sobic010G128300 Sobic001G233100--Sobic005G226200 Sobic001G233100--Sobic005G226400 Sobic001G233100--Sobic002G392000 Sobic003G046700--Sobic002G334000 Sobic010G269000 Sobic010G269000 Sobic003G046700--Sobic010G269000 Sobic004G008600 Sobic004G008600 Sobic003G046700--Sobic004G008600 Sobic005G216500 Sobic005G216500 Sobic003G046700--Sobic005G216500 Sobic003G046700--Sobic005G226350 Sobic003G046700--Sobic007G220400 Sobic003G046700--Sobic010G191700 Sobic003G046700--Sobic009G018300 Sobic003G046700--Sobic010G241900 Sobic009G018300--Sobic007G097550 Sobic009G018300--Sobic001G233100 Sobic009G018300--Sobic001G506100 Sobic009G018300--Sobic009G004900 Sobic009G018300--Sobic003G046700 Sobic009G018300--Sobic001G521600 Sobic004G337950 Sobic004G337950 Sobic009G018300--Sobic004G337950 Sobic004G009300 Sobic004G009300 Sobic009G018300--Sobic004G009300 Sobic009G018300--Sobic010G269000 Sobic009G004900--Sobic001G233100 Sobic009G004900--Sobic009G018300 Sobic009G004900--Sobic001G506100 Sobic009G004900--Sobic007G097550 Sobic009G004900--Sobic005G226400 Sobic009G004900--Sobic010G128300 Sobic009G004900--Sobic004G119900 Sobic004G120000 Sobic004G120000 Sobic009G004900--Sobic004G120000 Sobic002G409200 Sobic002G409200 Sobic009G004900--Sobic002G409200 Sobic001G521600--Sobic009G018300 Sobic001G521600--Sobic004G337950 Sobic001G521600--Sobic003G046700 Sobic001G521600--Sobic010G128300 Sobic001G521600--Sobic001G506100 Sobic001G521600--Sobic004G119900 Sobic001G521600--Sobic007G097550 Sobic001G521600--Sobic001G233100 Sobic001G521600--Sobic005G134200 Sobic002G392000--Sobic010G128300 Sobic002G392000--Sobic005G205400 Sobic006G047200 Sobic006G047200 Sobic002G392000--Sobic006G047200 Sobic001G499900 Sobic001G499900 Sobic002G392000--Sobic001G499900 Sobic002G392000--Sobic009G136800 Sobic008G084800 Sobic008G084800 Sobic002G392000--Sobic008G084800 Sobic002G392000--Sobic010G191700 Sobic002G392000--Sobic010G241900 Sobic002G392000--Sobic002G391300 Sobic007G206800 Sobic007G206800 Sobic002G334000--Sobic007G206800 Sobic002G334000--Sobic003G046700 Sobic002G334000--Sobic010G191700 Sobic002G391400 Sobic002G391400 Sobic002G334000--Sobic002G391400 Sobic002G334000--Sobic010G241900 Sobic002G334000--Sobic007G220400 Sobic001G238100 Sobic001G238100 Sobic002G334000--Sobic001G238100 Sobic002G334000--Sobic005G226350 Sobic002G334000--Sobic010G128300
Octagon: transcription factors


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