Gene annotation
Transcriptome id Sobic.001G238100.1
Synonym Sb01g021060, ATEXPA11, ATHEXPALPHA1.14, ATEXP11, EXP11, EXPA11
Functional annotation expansin precursor, putative, expressed
UniProt A0A1B6QKL3
Pfam PF03330 PF01357
Panther DB PTHR31867 PTHR31867:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20190 : expansin 11
RAP-DB (Rice) LOC_Os03g31480.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a023908 , Zm00025a006815 , Zm00025a006817 , Zm00025a006811 , Zm00025a006813
Brachypodium KQJ96857 , KQJ96855 , KQK23578 , KQK03594 , KQK23582 , KQJ95870
Barley HORVU4Hr1G072580.3 , HORVU4Hr1G072580.1 , HORVU4Hr1G072410.1 , HORVU4Hr1G072580.4 , HORVU4Hr1G072400.1 , HORVU4Hr1G072580.2 , HORVU7Hr1G092600.1 , HORVU7Hr1G092600.2 , HORVU7Hr1G092600.3 , HORVU7Hr1G092600.4 , HORVU7Hr1G092600.5 , HORVU7Hr1G092600.6 , HORVU7Hr1G092600.7
Wheat TraesCS4B02G272600 , TraesCS4D02G271900 , TraesCS4B02G271100 , TraesCS1B02G156700 , TraesCS4D02G271700 , TraesCS7D02G387400 , TraesCS7D02G387400 , TraesCS4D02G270400 , TraesCS4B02G272700 , TraesCS4A02G034300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G334000 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
2 Sobic.003G046700 expressed protein -
3 Sobic.006G135500 glyoxal oxidase-related, putative, expressed -
4 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
5 Sobic.001G499900 expansin precursor, putative, expressed -
6 Sobic.009G032900 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.001G506100 Leucine-rich repeat transmembrane protein kinase("PubMedID : 26759170,PubMedID : 24597475")@receptor-like protein kinase 2 precursor, putative, expressed -
8 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
9 Sobic.002G392100 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.009G079200 expressed protein -
11 Sobic.004G351200 -(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
12 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
13 Sobic.005G226350 - -
14 Sobic.005G216700 plant protein of unknown function domain containing protein, expressed -
15 Sobic.009G018300 vrga1, putative, expressed -
16 Sobic.002G391400 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.010G191700 cytochrome P450, putative, expressed -
18 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -
19 Sobic.007G019900 expansin precursor, putative, expressed -
20 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic001G238100 Sobic001G238100 Sobic002G334000 Sobic002G334000 Sobic001G238100--Sobic002G334000 Sobic003G046700 Sobic003G046700 Sobic001G238100--Sobic003G046700 Sobic006G135500 Sobic006G135500 Sobic001G238100--Sobic006G135500 Sobic007G206800 Sobic007G206800 Sobic001G238100--Sobic007G206800 Sobic001G499900 Sobic001G499900 Sobic001G238100--Sobic001G499900 Sobic009G032900 Sobic009G032900 Sobic001G238100--Sobic009G032900 Sobic001G506100 Sobic001G506100 Sobic001G238100--Sobic001G506100 Sobic007G220400 Sobic007G220400 Sobic001G238100--Sobic007G220400 Sobic002G392100 Sobic002G392100 Sobic001G238100--Sobic002G392100 Sobic002G334000--Sobic007G206800 Sobic002G334000--Sobic003G046700 Sobic010G191700 Sobic010G191700 Sobic002G334000--Sobic010G191700 Sobic002G391400 Sobic002G391400 Sobic002G334000--Sobic002G391400 Sobic010G241900 Sobic010G241900 Sobic002G334000--Sobic010G241900 Sobic002G334000--Sobic007G220400 Sobic002G334000--Sobic001G238100 Sobic005G226350 Sobic005G226350 Sobic002G334000--Sobic005G226350 Sobic010G128300 Sobic010G128300 Sobic002G334000--Sobic010G128300 Sobic003G046700--Sobic002G334000 Sobic010G269000 Sobic010G269000 Sobic003G046700--Sobic010G269000 Sobic004G008600 Sobic004G008600 Sobic003G046700--Sobic004G008600 Sobic005G216500 Sobic005G216500 Sobic003G046700--Sobic005G216500 Sobic003G046700--Sobic005G226350 Sobic003G046700--Sobic007G220400 Sobic003G046700--Sobic010G191700 Sobic009G018300 Sobic009G018300 Sobic003G046700--Sobic009G018300 Sobic003G046700--Sobic010G241900 Sobic006G135500--Sobic001G238100 Sobic007G019900 Sobic007G019900 Sobic006G135500--Sobic007G019900 Sobic010G139100 Sobic010G139100 Sobic006G135500--Sobic010G139100 Sobic004G009300 Sobic004G009300 Sobic006G135500--Sobic004G009300 Sobic002G392300 Sobic002G392300 Sobic006G135500--Sobic002G392300 Sobic006G135500--Sobic003G046700 Sobic006G135500--Sobic002G334000 Sobic006G135500--Sobic009G032900 Sobic005G226200 Sobic005G226200 Sobic006G135500--Sobic005G226200 Sobic007G206800--Sobic002G391400 Sobic007G206800--Sobic002G334000 Sobic007G206800--Sobic007G220400 Sobic007G206800--Sobic010G241900 Sobic007G206800--Sobic010G191700 Sobic006G205700 Sobic006G205700 Sobic007G206800--Sobic006G205700 Sobic005G080600 Sobic005G080600 Sobic007G206800--Sobic005G080600 Sobic002G111900 Sobic002G111900 Sobic007G206800--Sobic002G111900 Sobic007G206800--Sobic002G392100 Sobic003G167300 Sobic003G167300 Sobic001G499900--Sobic003G167300 Sobic002G392000 Sobic002G392000 Sobic001G499900--Sobic002G392000 Sobic001G499900--Sobic010G241900 Sobic001G499900--Sobic007G220400 Sobic008G022100 Sobic008G022100 Sobic001G499900--Sobic008G022100 Sobic001G499900--Sobic007G206800 Sobic001G499900--Sobic010G191700 Sobic009G065700 Sobic009G065700 Sobic001G499900--Sobic009G065700 Sobic006G047200 Sobic006G047200 Sobic001G499900--Sobic006G047200 Sobic002G068000 Sobic002G068000 Sobic009G032900--Sobic002G068000 Sobic004G351200 Sobic004G351200 Sobic009G032900--Sobic004G351200 Sobic005G216700 Sobic005G216700 Sobic009G032900--Sobic005G216700 Sobic010G158400 Sobic010G158400 Sobic009G032900--Sobic010G158400 Sobic009G032900--Sobic002G334000 Sobic009G032900--Sobic010G139100 Sobic009G032900--Sobic007G206800 Sobic009G032900--Sobic003G046700 Sobic003G269900 Sobic003G269900 Sobic009G032900--Sobic003G269900 Sobic001G506100--Sobic009G018300 Sobic001G233100 Sobic001G233100 Sobic001G506100--Sobic001G233100 Sobic001G506100--Sobic010G128300 Sobic009G004900 Sobic009G004900 Sobic001G506100--Sobic009G004900 Sobic001G506100--Sobic002G392000 Sobic007G097550 Sobic007G097550 Sobic001G506100--Sobic007G097550 Sobic005G205400 Sobic005G205400 Sobic001G506100--Sobic005G205400 Sobic001G506100--Sobic005G226200 Sobic005G226400 Sobic005G226400 Sobic001G506100--Sobic005G226400 Sobic007G220400--Sobic010G241900 Sobic007G220400--Sobic010G191700 Sobic007G220400--Sobic007G206800 Sobic007G220400--Sobic002G111900 Sobic007G220400--Sobic005G226350 Sobic007G220400--Sobic002G391400 Sobic005G134200 Sobic005G134200 Sobic007G220400--Sobic005G134200 Sobic007G220400--Sobic010G128300 Sobic007G220400--Sobic002G334000 Sobic002G392100--Sobic002G391400 Sobic002G392100--Sobic007G206800 Sobic002G392100--Sobic002G334000 Sobic007G086300 Sobic007G086300 Sobic002G392100--Sobic007G086300 Sobic002G392100--Sobic006G205700 Sobic008G034900 Sobic008G034900 Sobic002G392100--Sobic008G034900 Sobic002G392100--Sobic003G167300 Sobic002G392100--Sobic010G241900 Sobic002G392100--Sobic001G499900
Octagon: transcription factors


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