Gene annotation
Transcriptome id Sobic.009G079200.1
Synonym Sb09g006620
Functional annotation expressed protein
UniProt C5YUQ2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g12120.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G084800 major facilitator superfamily antiporter, putative, expressed -
2 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.001G499900 expansin precursor, putative, expressed -
4 Sobic.001G238100 expansin precursor, putative, expressed -
5 Sobic.005G212800 carboxyl-terminal peptidase, putative, expressed -
6 Sobic.002G334000 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
7 Sobic.006G178300 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.001G234100 expressed protein -
9 Sobic.001G521600 Leucine-rich repeat family protein("PubMedID : 26759170,PubMedID : 24597475")@leucine-rich repeat family protein, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
10 Sobic.005G101000 - -
11 Sobic.005G035900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
12 Sobic.002G392000 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.006G133300 expressed protein -
14 Sobic.005G205400 - -
15 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
16 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
17 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
18 Sobic.008G022100 nucleoside-triphosphatase, putative, expressed K14641: apyrase
19 Sobic.006G059800 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
20 Sobic.010G191700 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic009G079200 Sobic009G079200 Sobic008G084800 Sobic008G084800 Sobic009G079200--Sobic008G084800 Sobic006G047200 Sobic006G047200 Sobic009G079200--Sobic006G047200 Sobic001G499900 Sobic001G499900 Sobic009G079200--Sobic001G499900 Sobic001G238100 Sobic001G238100 Sobic009G079200--Sobic001G238100 Sobic005G212800 Sobic005G212800 Sobic009G079200--Sobic005G212800 Sobic002G334000 Sobic002G334000 Sobic009G079200--Sobic002G334000 Sobic006G178300 Sobic006G178300 Sobic009G079200--Sobic006G178300 Sobic001G234100 Sobic001G234100 Sobic009G079200--Sobic001G234100 Sobic001G521600 Sobic001G521600 Sobic009G079200--Sobic001G521600 Sobic008G084800--Sobic001G234100 Sobic005G205400 Sobic005G205400 Sobic008G084800--Sobic005G205400 Sobic008G084800--Sobic005G212800 Sobic005G101000 Sobic005G101000 Sobic008G084800--Sobic005G101000 Sobic008G084800--Sobic006G047200 Sobic002G392000 Sobic002G392000 Sobic008G084800--Sobic002G392000 Sobic005G176600 Sobic005G176600 Sobic008G084800--Sobic005G176600 Sobic008G058600 Sobic008G058600 Sobic008G084800--Sobic008G058600 Sobic007G097550 Sobic007G097550 Sobic008G084800--Sobic007G097550 Sobic005G035900 Sobic005G035900 Sobic006G047200--Sobic005G035900 Sobic006G047200--Sobic005G205400 Sobic006G047200--Sobic008G084800 Sobic006G047200--Sobic002G392000 Sobic006G047200--Sobic001G234100 Sobic006G047200--Sobic005G101000 Sobic009G136800 Sobic009G136800 Sobic006G047200--Sobic009G136800 Sobic010G241900 Sobic010G241900 Sobic006G047200--Sobic010G241900 Sobic005G134200 Sobic005G134200 Sobic006G047200--Sobic005G134200 Sobic003G167300 Sobic003G167300 Sobic001G499900--Sobic003G167300 Sobic001G499900--Sobic002G392000 Sobic001G499900--Sobic010G241900 Sobic007G220400 Sobic007G220400 Sobic001G499900--Sobic007G220400 Sobic008G022100 Sobic008G022100 Sobic001G499900--Sobic008G022100 Sobic007G206800 Sobic007G206800 Sobic001G499900--Sobic007G206800 Sobic010G191700 Sobic010G191700 Sobic001G499900--Sobic010G191700 Sobic009G065700 Sobic009G065700 Sobic001G499900--Sobic009G065700 Sobic001G499900--Sobic006G047200 Sobic001G238100--Sobic002G334000 Sobic003G046700 Sobic003G046700 Sobic001G238100--Sobic003G046700 Sobic006G135500 Sobic006G135500 Sobic001G238100--Sobic006G135500 Sobic001G238100--Sobic007G206800 Sobic001G238100--Sobic001G499900 Sobic009G032900 Sobic009G032900 Sobic001G238100--Sobic009G032900 Sobic001G506100 Sobic001G506100 Sobic001G238100--Sobic001G506100 Sobic001G238100--Sobic007G220400 Sobic002G392100 Sobic002G392100 Sobic001G238100--Sobic002G392100 Sobic005G212800--Sobic001G234100 Sobic005G212800--Sobic008G084800 Sobic005G212800--Sobic005G101000 Sobic005G212800--Sobic005G205400 Sobic003G045650 Sobic003G045650 Sobic005G212800--Sobic003G045650 Sobic005G212800--Sobic006G047200 Sobic005G212800--Sobic008G058600 Sobic005G212800--Sobic007G097550 Sobic001G395900 Sobic001G395900 Sobic005G212800--Sobic001G395900 Sobic002G334000--Sobic007G206800 Sobic002G334000--Sobic003G046700 Sobic002G334000--Sobic010G191700 Sobic002G391400 Sobic002G391400 Sobic002G334000--Sobic002G391400 Sobic002G334000--Sobic010G241900 Sobic002G334000--Sobic007G220400 Sobic002G334000--Sobic001G238100 Sobic005G226350 Sobic005G226350 Sobic002G334000--Sobic005G226350 Sobic010G128300 Sobic010G128300 Sobic002G334000--Sobic010G128300 Sobic006G178300--Sobic008G084800 Sobic006G178300--Sobic007G097550 Sobic006G178300--Sobic005G212800 Sobic009G018300 Sobic009G018300 Sobic006G178300--Sobic009G018300 Sobic006G178300--Sobic001G234100 Sobic006G178300--Sobic005G205400 Sobic006G178300--Sobic006G047200 Sobic006G178300--Sobic009G079200 Sobic006G178300--Sobic005G176600 Sobic001G234100--Sobic008G084800 Sobic001G234100--Sobic005G101000 Sobic001G234100--Sobic005G212800 Sobic001G234100--Sobic005G205400 Sobic001G234100--Sobic006G047200 Sobic001G234100--Sobic008G058600 Sobic001G234100--Sobic001G395900 Sobic001G234100--Sobic005G176600 Sobic001G234100--Sobic003G045650 Sobic001G521600--Sobic009G018300 Sobic004G337950 Sobic004G337950 Sobic001G521600--Sobic004G337950 Sobic001G521600--Sobic003G046700 Sobic001G521600--Sobic010G128300 Sobic001G521600--Sobic001G506100 Sobic004G119900 Sobic004G119900 Sobic001G521600--Sobic004G119900 Sobic001G521600--Sobic007G097550 Sobic001G233100 Sobic001G233100 Sobic001G521600--Sobic001G233100 Sobic001G521600--Sobic005G134200
Octagon: transcription factors


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