Gene annotation
Transcriptome id Sobic.003G046700.1,Sobic.003G046700.2
Synonym Sb03g004080
Functional annotation expressed protein
UniProt C5XMT4
Pfam PF11145
Panther DB PTHR33389:SF4 PTHR33389
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G52780 : Protein of unknown function (DUF2921)
RAP-DB (Rice) LOC_Os01g08170.1 : expressed protein
MaizeGDB (Corn) Zm00025a023205
Brachypodium KQK02983 , KQK02984 , PNT70065
Barley HORVU3Hr1G022950.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G334000 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
2 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -
3 Sobic.004G008600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
4 Sobic.005G216500 plant protein of unknown function domain containing protein, expressed -
5 Sobic.005G226350 - -
6 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
7 Sobic.010G191700 cytochrome P450, putative, expressed -
8 Sobic.009G018300 vrga1, putative, expressed -
9 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
10 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
11 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.005G120900 expressed protein -
13 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
14 Sobic.009G032900 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.001G506100 Leucine-rich repeat transmembrane protein kinase("PubMedID : 26759170,PubMedID : 24597475")@receptor-like protein kinase 2 precursor, putative, expressed -
16 Sobic.001G238100 expansin precursor, putative, expressed -
17 Sobic.002G391400 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.001G521600 Leucine-rich repeat family protein("PubMedID : 26759170,PubMedID : 24597475")@leucine-rich repeat family protein, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
19 Sobic.007G094100 OsWAK108 - OsWAK receptor-like protein kinase, expressed -
20 Sobic.005G079100 dirigent, putative -


Gene co-expression network
sample Sobic003G046700 Sobic003G046700 Sobic002G334000 Sobic002G334000 Sobic003G046700--Sobic002G334000 Sobic010G269000 Sobic010G269000 Sobic003G046700--Sobic010G269000 Sobic004G008600 Sobic004G008600 Sobic003G046700--Sobic004G008600 Sobic005G216500 Sobic005G216500 Sobic003G046700--Sobic005G216500 Sobic005G226350 Sobic005G226350 Sobic003G046700--Sobic005G226350 Sobic007G220400 Sobic007G220400 Sobic003G046700--Sobic007G220400 Sobic010G191700 Sobic010G191700 Sobic003G046700--Sobic010G191700 Sobic009G018300 Sobic009G018300 Sobic003G046700--Sobic009G018300 Sobic010G241900 Sobic010G241900 Sobic003G046700--Sobic010G241900 Sobic007G206800 Sobic007G206800 Sobic002G334000--Sobic007G206800 Sobic002G334000--Sobic003G046700 Sobic002G334000--Sobic010G191700 Sobic002G391400 Sobic002G391400 Sobic002G334000--Sobic002G391400 Sobic002G334000--Sobic010G241900 Sobic002G334000--Sobic007G220400 Sobic001G238100 Sobic001G238100 Sobic002G334000--Sobic001G238100 Sobic002G334000--Sobic005G226350 Sobic010G128300 Sobic010G128300 Sobic002G334000--Sobic010G128300 Sobic010G269000--Sobic004G008600 Sobic005G134200 Sobic005G134200 Sobic010G269000--Sobic005G134200 Sobic010G269000--Sobic003G046700 Sobic005G120900 Sobic005G120900 Sobic010G269000--Sobic005G120900 Sobic010G269000--Sobic005G216500 Sobic010G269000--Sobic005G226350 Sobic010G269000--Sobic007G220400 Sobic005G226400 Sobic005G226400 Sobic010G269000--Sobic005G226400 Sobic010G269000--Sobic010G241900 Sobic004G008600--Sobic010G269000 Sobic004G008600--Sobic005G134200 Sobic004G008600--Sobic005G216500 Sobic004G008600--Sobic003G046700 Sobic004G008600--Sobic005G226350 Sobic004G008600--Sobic005G120900 Sobic004G008600--Sobic007G220400 Sobic004G008600--Sobic005G226400 Sobic004G008600--Sobic010G191700 Sobic005G216500--Sobic004G008600 Sobic005G216500--Sobic010G269000 Sobic005G216500--Sobic003G046700 Sobic005G216500--Sobic005G134200 Sobic008G084900 Sobic008G084900 Sobic005G216500--Sobic008G084900 Sobic005G216500--Sobic007G220400 Sobic002G115600 Sobic002G115600 Sobic005G216500--Sobic002G115600 Sobic007G094100 Sobic007G094100 Sobic005G216500--Sobic007G094100 Sobic010G115000 Sobic010G115000 Sobic005G216500--Sobic010G115000 Sobic005G226350--Sobic007G220400 Sobic005G226350--Sobic010G128300 Sobic005G226350--Sobic010G241900 Sobic005G226350--Sobic010G269000 Sobic005G226350--Sobic010G191700 Sobic005G226350--Sobic005G134200 Sobic002G111900 Sobic002G111900 Sobic005G226350--Sobic002G111900 Sobic005G226350--Sobic005G226400 Sobic005G226350--Sobic004G008600 Sobic007G220400--Sobic010G241900 Sobic007G220400--Sobic010G191700 Sobic007G220400--Sobic007G206800 Sobic007G220400--Sobic002G111900 Sobic007G220400--Sobic005G226350 Sobic007G220400--Sobic002G391400 Sobic007G220400--Sobic005G134200 Sobic007G220400--Sobic010G128300 Sobic007G220400--Sobic002G334000 Sobic010G191700--Sobic010G241900 Sobic010G191700--Sobic002G111900 Sobic010G191700--Sobic007G220400 Sobic002G391300 Sobic002G391300 Sobic010G191700--Sobic002G391300 Sobic010G191700--Sobic010G128300 Sobic010G191700--Sobic002G391400 Sobic003G441601 Sobic003G441601 Sobic010G191700--Sobic003G441601 Sobic010G191700--Sobic007G206800 Sobic010G191700--Sobic005G134200 Sobic007G097550 Sobic007G097550 Sobic009G018300--Sobic007G097550 Sobic001G233100 Sobic001G233100 Sobic009G018300--Sobic001G233100 Sobic001G506100 Sobic001G506100 Sobic009G018300--Sobic001G506100 Sobic009G004900 Sobic009G004900 Sobic009G018300--Sobic009G004900 Sobic009G018300--Sobic003G046700 Sobic001G521600 Sobic001G521600 Sobic009G018300--Sobic001G521600 Sobic004G337950 Sobic004G337950 Sobic009G018300--Sobic004G337950 Sobic004G009300 Sobic004G009300 Sobic009G018300--Sobic004G009300 Sobic009G018300--Sobic010G269000 Sobic010G241900--Sobic010G191700 Sobic010G241900--Sobic002G391400 Sobic010G241900--Sobic007G220400 Sobic010G241900--Sobic002G391300 Sobic010G241900--Sobic010G128300 Sobic010G241900--Sobic007G206800 Sobic010G241900--Sobic002G111900 Sobic010G241900--Sobic005G134200 Sobic010G241900--Sobic005G226350
Octagon: transcription factors


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