Gene annotation
Transcriptome id Sobic.003G028300.1
Synonym ATHB15, ATHB15, ATHB-15, ICU4, Sb03g002660, CNA
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
Class III HD ZIP family protein (PubMedID : 23915383)
START domain containing protein, expressed
UniProt C5XLT3
Pfam PF00046 PF08670 PF01852
Panther DB PTHR24326 PTHR24326:SF268
NCBI CDD -
KEGG Orthology K09338; homeobox-leucine zipper protein
Gene Ontology GO:0003677; DNA binding GO:0008289lipid binding


Orthologs (automatic annotation)
TAIR AT1G52150 : Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
RAP-DB (Rice) LOC_Os03g43930.2 : START domain containing protein, expressed
MaizeGDB (Corn) Zm00025a006577 , Zm00025a007298 , Zm00025a025364 , Zm00025a035846 , Zm00025a017264
Brachypodium KQK03195 , KQK14011 , KQJ97131 , KQJ85820 , PNT67561
Barley HORVU3Hr1G026990.30 , HORVU3Hr1G026990.33 , HORVU3Hr1G026990.37 , HORVU3Hr1G026990.36 , HORVU1Hr1G041790.12 , HORVU1Hr1G041790.13 , HORVU1Hr1G041790.10 , HORVU1Hr1G041790.11 , HORVU1Hr1G041790.14 , HORVU1Hr1G041790.15 , HORVU5Hr1G010650.1 , HORVU3Hr1G026990.39 , HORVU3Hr1G026990.38 , HORVU3Hr1G026990.31 , HORVU3Hr1G026990.32 , HORVU3Hr1G026990.35 , HORVU3Hr1G026990.34 , HORVU3Hr1G026990.9 , HORVU3Hr1G026990.7 , HORVU3Hr1G026990.6 , HORVU3Hr1G026990.3 , HORVU3Hr1G026990.2 , HORVU3Hr1G026990.1 , HORVU5Hr1G093150.5 , HORVU5Hr1G093150.4 , HORVU5Hr1G093150.7 , HORVU5Hr1G093150.6 , HORVU5Hr1G093150.1 , HORVU5Hr1G093150.3 , HORVU5Hr1G093150.2 , HORVU0Hr1G010250.6 , HORVU0Hr1G010250.4 , HORVU0Hr1G010250.5 , HORVU0Hr1G010250.2 , HORVU0Hr1G010250.3 , HORVU0Hr1G010250.1 , HORVU3Hr1G026990.28 , HORVU3Hr1G026990.29 , HORVU3Hr1G026990.24 , HORVU3Hr1G026990.22 , HORVU3Hr1G026990.23 , HORVU3Hr1G026990.20 , HORVU3Hr1G026990.21 , HORVU5Hr1G093150.11 , HORVU5Hr1G093150.10 , HORVU5Hr1G093150.12 , HORVU5Hr1G093150.15 , HORVU5Hr1G093150.14 , HORVU1Hr1G041790.7 , HORVU1Hr1G041790.1 , HORVU1Hr1G041790.2 , HORVU1Hr1G041790.3 , HORVU1Hr1G041790.4 , HORVU1Hr1G041790.5 , HORVU1Hr1G041790.6 , HORVU3Hr1G026990.27 , HORVU1Hr1G041790.8 , HORVU1Hr1G041790.9 , HORVU3Hr1G026990.17 , HORVU3Hr1G026990.11 , HORVU5Hr1G093150.9 , HORVU5Hr1G093150.8 , HORVU3Hr1G026990.40 , HORVU3Hr1G026990.41 , HORVU3Hr1G026990.44 , HORVU3Hr1G026990.45 , HORVU3Hr1G026990.46
Wheat TraesCS5B02G378000 , TraesCS3A02G312800 , TraesCS3A02G312800 , TraesCS1A02G157500 , TraesCS3D02G141500 , TraesCS3D02G141500 , TraesCS3B02G159100 , TraesCS1D02G155200 , TraesCS1D02G155200 , TraesCS1D02G155200 , TraesCS5A02G375800 , TraesCS3B02G159100 , TraesCS5D02G385300 , TraesCS5A02G043400 , TraesCS5D02G052300 , TraesCS1B02G173900 , TraesCS5B02G047200
Populus PNS92629 , PNS92626 , PNS92627 , PNS92628 , PNT55370 , PNT55371 , PNT55373 , PNT33396 , PNT33397


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G170300 beta,beta-carotene 9,10-dioxygenase, putative, expressed K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
2 Sobic.006G135300 expressed protein -
3 Sobic.006G229100 receptor-like kinase, putative, expressed -
4 Sobic.003G015300 expressed protein -
5 Sobic.002G101400 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
6 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
7 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
8 Sobic.010G113100 cytokinin-O-glucosyltransferase 2, putative, expressed -
9 Sobic.003G203600 aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
10 Sobic.003G322100 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
11 Sobic.007G073000 - -
12 Sobic.001G506800 exostosin family domain containing protein, expressed -
13 Sobic.001G455100 expressed protein -
14 Sobic.001G360500 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.010G028100 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
16 Sobic.005G177400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
17 Sobic.003G128800 expansin precursor, putative, expressed -
18 Sobic.001G067100 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
19 Sobic.007G090472 - -
20 Sobic.003G287200 WRKY23, expressed -


Gene co-expression network
sample Sobic003G028300 Sobic003G028300 Sobic007G170300 Sobic007G170300 Sobic003G028300--Sobic007G170300 Sobic006G135300 Sobic006G135300 Sobic003G028300--Sobic006G135300 Sobic006G229100 Sobic006G229100 Sobic003G028300--Sobic006G229100 Sobic003G015300 Sobic003G015300 Sobic003G028300--Sobic003G015300 Sobic002G101400 Sobic002G101400 Sobic003G028300--Sobic002G101400 Sobic010G082000 Sobic010G082000 Sobic003G028300--Sobic010G082000 Sobic006G092700 Sobic006G092700 Sobic003G028300--Sobic006G092700 Sobic010G113100 Sobic010G113100 Sobic003G028300--Sobic010G113100 Sobic003G203600 Sobic003G203600 Sobic003G028300--Sobic003G203600 Sobic007G015200 Sobic007G015200 Sobic007G170300--Sobic007G015200 Sobic007G170300--Sobic002G101400 Sobic005G046700 Sobic005G046700 Sobic007G170300--Sobic005G046700 Sobic007G170300--Sobic003G203600 Sobic006G028400 Sobic006G028400 Sobic007G170300--Sobic006G028400 Sobic006G183900 Sobic006G183900 Sobic007G170300--Sobic006G183900 Sobic007G073000 Sobic007G073000 Sobic007G170300--Sobic007G073000 Sobic002G185800 Sobic002G185800 Sobic007G170300--Sobic002G185800 Sobic003G287200 Sobic003G287200 Sobic007G170300--Sobic003G287200 Sobic006G135300--Sobic006G092700 Sobic006G135300--Sobic010G082000 Sobic006G135300--Sobic007G073000 Sobic010G028100 Sobic010G028100 Sobic006G135300--Sobic010G028100 Sobic006G019700 Sobic006G019700 Sobic006G135300--Sobic006G019700 Sobic010G152400 Sobic010G152400 Sobic006G135300--Sobic010G152400 Sobic003G322100 Sobic003G322100 Sobic006G135300--Sobic003G322100 Sobic004G306900 Sobic004G306900 Sobic006G135300--Sobic004G306900 Sobic002G146000 Sobic002G146000 Sobic006G135300--Sobic002G146000 Sobic007G090472 Sobic007G090472 Sobic006G229100--Sobic007G090472 Sobic006G229100--Sobic010G082000 Sobic005G115300 Sobic005G115300 Sobic006G229100--Sobic005G115300 Sobic001G360500 Sobic001G360500 Sobic006G229100--Sobic001G360500 Sobic001G503000 Sobic001G503000 Sobic006G229100--Sobic001G503000 Sobic006G229100--Sobic003G287200 Sobic010G096700 Sobic010G096700 Sobic006G229100--Sobic010G096700 Sobic006G229100--Sobic006G135300 Sobic001G149400 Sobic001G149400 Sobic006G229100--Sobic001G149400 Sobic010G110800 Sobic010G110800 Sobic003G015300--Sobic010G110800 Sobic005G065900 Sobic005G065900 Sobic003G015300--Sobic005G065900 Sobic007G165400 Sobic007G165400 Sobic003G015300--Sobic007G165400 Sobic003G015300--Sobic005G046700 Sobic003G015300--Sobic007G170300 Sobic003G152200 Sobic003G152200 Sobic003G015300--Sobic003G152200 Sobic002G001700 Sobic002G001700 Sobic003G015300--Sobic002G001700 Sobic004G009500 Sobic004G009500 Sobic003G015300--Sobic004G009500 Sobic003G015300--Sobic003G028300 Sobic002G101400--Sobic010G113100 Sobic002G101400--Sobic001G360500 Sobic002G101400--Sobic005G046700 Sobic002G101400--Sobic006G092700 Sobic002G101400--Sobic007G170300 Sobic003G053600 Sobic003G053600 Sobic002G101400--Sobic003G053600 Sobic002G101400--Sobic007G073000 Sobic007G057400 Sobic007G057400 Sobic002G101400--Sobic007G057400 Sobic002G101400--Sobic010G028100 Sobic010G082000--Sobic006G092700 Sobic003G240400 Sobic003G240400 Sobic010G082000--Sobic003G240400 Sobic010G082000--Sobic006G135300 Sobic010G082000--Sobic010G152400 Sobic006G028500 Sobic006G028500 Sobic010G082000--Sobic006G028500 Sobic003G215300 Sobic003G215300 Sobic010G082000--Sobic003G215300 Sobic010G082000--Sobic006G019700 Sobic010G082000--Sobic007G073000 Sobic006G196400 Sobic006G196400 Sobic010G082000--Sobic006G196400 Sobic006G092700--Sobic006G135300 Sobic006G092700--Sobic010G082000 Sobic006G092700--Sobic010G028100 Sobic003G000100 Sobic003G000100 Sobic006G092700--Sobic003G000100 Sobic006G092700--Sobic007G073000 Sobic006G092700--Sobic010G152400 Sobic006G092700--Sobic002G146000 Sobic006G092700--Sobic004G306900 Sobic006G092700--Sobic006G019700 Sobic010G113100--Sobic002G101400 Sobic010G113100--Sobic010G028100 Sobic010G113100--Sobic006G092700 Sobic008G164450 Sobic008G164450 Sobic010G113100--Sobic008G164450 Sobic010G113100--Sobic006G135300 Sobic010G113100--Sobic007G057400 Sobic002G216100 Sobic002G216100 Sobic010G113100--Sobic002G216100 Sobic001G506800 Sobic001G506800 Sobic010G113100--Sobic001G506800 Sobic010G113100--Sobic001G360500 Sobic001G067100 Sobic001G067100 Sobic003G203600--Sobic001G067100 Sobic002G195600 Sobic002G195600 Sobic003G203600--Sobic002G195600 Sobic003G203600--Sobic006G135300 Sobic003G203600--Sobic010G082000 Sobic003G426500 Sobic003G426500 Sobic003G203600--Sobic003G426500 Sobic003G203600--Sobic006G028400 Sobic003G203600--Sobic006G092700 Sobic003G203600--Sobic007G170300 Sobic004G038700 Sobic004G038700 Sobic003G203600--Sobic004G038700
Octagon: transcription factors


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