Gene annotation
Transcriptome id Sobic.005G065900.1
Synonym Sb05g005550
Functional annotation glycine-rich cell wall structural protein 2 precursor, putative, expressed
UniProt C5Y6J5
Pfam -
Panther DB PTHR33548 PTHR33548:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g31640.1 : glycine-rich cell wall structural protein 2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a012780 , Zm00025a012777 , Zm00025a012766 , Zm00025a012779 , Zm00025a012769 , Zm00025a043908
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G148800 WRKY31, expressed -
2 Sobic.005G066432 - -
3 Sobic.006G256900 dirigent-like protein pDIR17, putative, expressed -
4 Sobic.002G042200 gibberellin receptor GID1L2, putative, expressed -
5 Sobic.009G199001 - -
6 Sobic.002G404100 annexin, putative, expressed -
7 Sobic.004G322800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.005G066100 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
9 Sobic.007G050200 DNA binding protein, putative, expressed -
10 Sobic.010G110800 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.004G139300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 71D10, putative, expressed -
12 Sobic.009G219200 expressed protein -
13 Sobic.002G001700 ZOS7-01 - C2H2 zinc finger protein, expressed -
14 Sobic.003G015300 expressed protein -
15 Sobic.009G221500 lipid phosphatase protein, putative, expressed -
16 Sobic.006G197100 DNA binding protein, putative, expressed -
17 Sobic.008G019800 - -
18 Sobic.006G028500 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
19 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
20 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -


Gene co-expression network
sample Sobic005G065900 Sobic005G065900 Sobic010G148800 Sobic010G148800 Sobic005G065900--Sobic010G148800 Sobic005G066432 Sobic005G066432 Sobic005G065900--Sobic005G066432 Sobic006G256900 Sobic006G256900 Sobic005G065900--Sobic006G256900 Sobic002G042200 Sobic002G042200 Sobic005G065900--Sobic002G042200 Sobic009G199001 Sobic009G199001 Sobic005G065900--Sobic009G199001 Sobic002G404100 Sobic002G404100 Sobic005G065900--Sobic002G404100 Sobic004G322800 Sobic004G322800 Sobic005G065900--Sobic004G322800 Sobic005G066100 Sobic005G066100 Sobic005G065900--Sobic005G066100 Sobic007G050200 Sobic007G050200 Sobic005G065900--Sobic007G050200 Sobic010G148800--Sobic005G065900 Sobic010G148800--Sobic004G322800 Sobic010G148800--Sobic006G256900 Sobic010G148800--Sobic005G066432 Sobic010G148800--Sobic009G199001 Sobic010G148800--Sobic002G404100 Sobic010G148800--Sobic002G042200 Sobic009G219200 Sobic009G219200 Sobic010G148800--Sobic009G219200 Sobic006G079300 Sobic006G079300 Sobic010G148800--Sobic006G079300 Sobic005G066432--Sobic005G065900 Sobic005G066432--Sobic010G148800 Sobic005G066432--Sobic005G066100 Sobic005G066432--Sobic006G079300 Sobic006G277700 Sobic006G277700 Sobic005G066432--Sobic006G277700 Sobic003G020200 Sobic003G020200 Sobic005G066432--Sobic003G020200 Sobic004G009400 Sobic004G009400 Sobic005G066432--Sobic004G009400 Sobic005G160700 Sobic005G160700 Sobic005G066432--Sobic005G160700 Sobic005G066432--Sobic004G322800 Sobic006G256900--Sobic010G148800 Sobic006G256900--Sobic005G065900 Sobic006G256900--Sobic007G050200 Sobic006G256900--Sobic009G199001 Sobic006G197100 Sobic006G197100 Sobic006G256900--Sobic006G197100 Sobic009G221500 Sobic009G221500 Sobic006G256900--Sobic009G221500 Sobic003G140700 Sobic003G140700 Sobic006G256900--Sobic003G140700 Sobic004G322100 Sobic004G322100 Sobic006G256900--Sobic004G322100 Sobic001G058300 Sobic001G058300 Sobic006G256900--Sobic001G058300 Sobic002G042200--Sobic006G197100 Sobic004G139300 Sobic004G139300 Sobic002G042200--Sobic004G139300 Sobic002G261500 Sobic002G261500 Sobic002G042200--Sobic002G261500 Sobic002G042200--Sobic005G065900 Sobic002G042200--Sobic010G148800 Sobic004G202400 Sobic004G202400 Sobic002G042200--Sobic004G202400 Sobic003G157600 Sobic003G157600 Sobic002G042200--Sobic003G157600 Sobic006G251400 Sobic006G251400 Sobic002G042200--Sobic006G251400 Sobic004G209400 Sobic004G209400 Sobic002G042200--Sobic004G209400 Sobic009G199001--Sobic009G219200 Sobic009G199001--Sobic010G148800 Sobic009G199001--Sobic001G058300 Sobic009G199001--Sobic003G140700 Sobic009G199001--Sobic006G256900 Sobic009G199001--Sobic007G050200 Sobic001G438200 Sobic001G438200 Sobic009G199001--Sobic001G438200 Sobic009G199001--Sobic004G209400 Sobic009G074500 Sobic009G074500 Sobic009G199001--Sobic009G074500 Sobic006G028500 Sobic006G028500 Sobic002G404100--Sobic006G028500 Sobic002G216100 Sobic002G216100 Sobic002G404100--Sobic002G216100 Sobic002G404100--Sobic010G148800 Sobic003G240400 Sobic003G240400 Sobic002G404100--Sobic003G240400 Sobic001G360500 Sobic001G360500 Sobic002G404100--Sobic001G360500 Sobic002G404100--Sobic005G065900 Sobic004G348800 Sobic004G348800 Sobic002G404100--Sobic004G348800 Sobic002G404100--Sobic004G322800 Sobic010G082000 Sobic010G082000 Sobic002G404100--Sobic010G082000 Sobic004G322800--Sobic010G148800 Sobic004G322800--Sobic006G079300 Sobic004G322800--Sobic009G074500 Sobic001G242100 Sobic001G242100 Sobic004G322800--Sobic001G242100 Sobic004G322800--Sobic001G438200 Sobic004G322800--Sobic004G209400 Sobic004G322800--Sobic009G199001 Sobic003G282200 Sobic003G282200 Sobic004G322800--Sobic003G282200 Sobic004G322800--Sobic002G404100 Sobic005G066100--Sobic005G066432 Sobic005G066100--Sobic004G202400 Sobic005G066100--Sobic005G065900 SobicK026900 SobicK026900 Sobic005G066100--SobicK026900 Sobic007G204700 Sobic007G204700 Sobic005G066100--Sobic007G204700 Sobic002G425000 Sobic002G425000 Sobic005G066100--Sobic002G425000 Sobic005G066100--Sobic010G148800 Sobic008G127933 Sobic008G127933 Sobic005G066100--Sobic008G127933 Sobic010G158500 Sobic010G158500 Sobic005G066100--Sobic010G158500 Sobic007G050200--Sobic004G322100 Sobic004G323300 Sobic004G323300 Sobic007G050200--Sobic004G323300 Sobic007G050200--Sobic009G221500 Sobic007G050200--Sobic003G140700 Sobic001G430100 Sobic001G430100 Sobic007G050200--Sobic001G430100 Sobic007G050200--Sobic006G256900 Sobic007G050200--Sobic001G058300 Sobic007G050200--Sobic009G199001 Sobic007G050200--Sobic009G219200
Octagon: transcription factors


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