Gene annotation
Transcriptome id Sobic.007G204700.1
Synonym Sb07g027210
Functional annotation expressed protein
UniProt C5YIM0
Pfam PF04654
Panther DB PTHR31881 PTHR31881:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G31330 : Protein of unknown function, DUF599
RAP-DB (Rice) LOC_Os08g40940.1 : expressed protein
MaizeGDB (Corn) Zm00025a005147 , Zm00025a047496
Brachypodium KQJ98988
Barley HORVU5Hr1G074450.3 , HORVU5Hr1G074450.2 , HORVU5Hr1G074450.1 , HORVU5Hr1G074450.5 , HORVU5Hr1G074450.4 , HORVU7Hr1G051650.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G158400 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
2 Sobic.001G462700 expressed protein -
3 Sobic.010G158500 Zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.008G127933 - -
5 Sobic.001G237900 expansin precursor, putative, expressed -
6 Sobic.005G215400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
7 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
8 Sobic.008G128200 - -
9 Sobic.004G348800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
10 Sobic.010G008400 bark storage protein A precursor, putative, expressed -
11 Sobic.010G270700 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.008G128066 - -
13 Sobic.005G066100 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
14 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
15 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
16 Sobic.006G078900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@tetraspanin family protein, putative, expressed -
17 Sobic.002G176100 membrane protein, putative, expressed -
18 Sobic.003G280400 hexokinase, putative, expressed K00844: hexokinase
19 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.006G197100 DNA binding protein, putative, expressed -


Gene co-expression network
sample Sobic007G204700 Sobic007G204700 Sobic006G158400 Sobic006G158400 Sobic007G204700--Sobic006G158400 Sobic001G462700 Sobic001G462700 Sobic007G204700--Sobic001G462700 Sobic010G158500 Sobic010G158500 Sobic007G204700--Sobic010G158500 Sobic008G127933 Sobic008G127933 Sobic007G204700--Sobic008G127933 Sobic001G237900 Sobic001G237900 Sobic007G204700--Sobic001G237900 Sobic005G215400 Sobic005G215400 Sobic007G204700--Sobic005G215400 Sobic004G202400 Sobic004G202400 Sobic007G204700--Sobic004G202400 Sobic008G128200 Sobic008G128200 Sobic007G204700--Sobic008G128200 Sobic004G348800 Sobic004G348800 Sobic007G204700--Sobic004G348800 Sobic006G158400--Sobic008G127933 Sobic008G027600 Sobic008G027600 Sobic006G158400--Sobic008G027600 Sobic006G158400--Sobic001G237900 Sobic006G158400--Sobic010G158500 Sobic006G158400--Sobic007G204700 Sobic003G007600 Sobic003G007600 Sobic006G158400--Sobic003G007600 Sobic010G043900 Sobic010G043900 Sobic006G158400--Sobic010G043900 Sobic001G318500 Sobic001G318500 Sobic006G158400--Sobic001G318500 Sobic003G299300 Sobic003G299300 Sobic006G158400--Sobic003G299300 Sobic002G247600 Sobic002G247600 Sobic001G462700--Sobic002G247600 Sobic001G325400 Sobic001G325400 Sobic001G462700--Sobic001G325400 Sobic006G039100 Sobic006G039100 Sobic001G462700--Sobic006G039100 Sobic009G111000 Sobic009G111000 Sobic001G462700--Sobic009G111000 Sobic001G462700--Sobic007G204700 Sobic003G117600 Sobic003G117600 Sobic001G462700--Sobic003G117600 Sobic010G008400 Sobic010G008400 Sobic001G462700--Sobic010G008400 Sobic001G331200 Sobic001G331200 Sobic001G462700--Sobic001G331200 Sobic004G046200 Sobic004G046200 Sobic001G462700--Sobic004G046200 Sobic010G158500--Sobic001G237900 Sobic010G158500--Sobic006G158400 Sobic010G158500--Sobic007G204700 Sobic002G124500 Sobic002G124500 Sobic010G158500--Sobic002G124500 SobicK026900 SobicK026900 Sobic010G158500--SobicK026900 Sobic010G063000 Sobic010G063000 Sobic010G158500--Sobic010G063000 Sobic010G158500--Sobic004G202400 Sobic010G158500--Sobic008G127933 Sobic005G066100 Sobic005G066100 Sobic010G158500--Sobic005G066100 Sobic008G127933--Sobic006G158400 Sobic002G425000 Sobic002G425000 Sobic008G127933--Sobic002G425000 Sobic008G127933--Sobic001G237900 Sobic008G127933--Sobic007G204700 Sobic008G128066 Sobic008G128066 Sobic008G127933--Sobic008G128066 Sobic010G270700 Sobic010G270700 Sobic008G127933--Sobic010G270700 Sobic008G009400 Sobic008G009400 Sobic008G127933--Sobic008G009400 Sobic001G238400 Sobic001G238400 Sobic008G127933--Sobic001G238400 Sobic008G127933--SobicK026900 Sobic001G237900--Sobic001G238400 Sobic001G237900--Sobic010G158500 Sobic003G053300 Sobic003G053300 Sobic001G237900--Sobic003G053300 Sobic001G237900--Sobic006G158400 Sobic001G237900--Sobic002G425000 Sobic001G237900--Sobic004G202400 Sobic001G304100 Sobic001G304100 Sobic001G237900--Sobic001G304100 Sobic001G237900--Sobic010G063000 Sobic002G213600 Sobic002G213600 Sobic001G237900--Sobic002G213600 Sobic005G215400--Sobic004G348800 Sobic005G215400--Sobic007G204700 Sobic010G045500 Sobic010G045500 Sobic005G215400--Sobic010G045500 Sobic001G430100 Sobic001G430100 Sobic005G215400--Sobic001G430100 Sobic010G212500 Sobic010G212500 Sobic005G215400--Sobic010G212500 Sobic002G105300 Sobic002G105300 Sobic005G215400--Sobic002G105300 Sobic003G119500 Sobic003G119500 Sobic005G215400--Sobic003G119500 Sobic007G050200 Sobic007G050200 Sobic005G215400--Sobic007G050200 Sobic004G322800 Sobic004G322800 Sobic005G215400--Sobic004G322800 Sobic006G197100 Sobic006G197100 Sobic004G202400--Sobic006G197100 Sobic001G416200 Sobic001G416200 Sobic004G202400--Sobic001G416200 Sobic004G202400--Sobic001G237900 Sobic004G202400--SobicK026900 Sobic003G157600 Sobic003G157600 Sobic004G202400--Sobic003G157600 Sobic004G349125 Sobic004G349125 Sobic004G202400--Sobic004G349125 Sobic004G042000 Sobic004G042000 Sobic004G202400--Sobic004G042000 Sobic002G042200 Sobic002G042200 Sobic004G202400--Sobic002G042200 Sobic003G311800 Sobic003G311800 Sobic004G202400--Sobic003G311800 Sobic008G128200--Sobic007G204700 Sobic008G128200--Sobic008G128066 Sobic008G128200--Sobic010G045500 Sobic003G364200 Sobic003G364200 Sobic008G128200--Sobic003G364200 Sobic006G078900 Sobic006G078900 Sobic008G128200--Sobic006G078900 Sobic008G128200--Sobic008G127933 Sobic008G128200--Sobic005G215400 Sobic005G069800 Sobic005G069800 Sobic008G128200--Sobic005G069800 Sobic008G128200--Sobic005G066100 Sobic001G264000 Sobic001G264000 Sobic004G348800--Sobic001G264000 Sobic004G348800--Sobic005G215400 Sobic004G348800--Sobic010G212500 Sobic004G348800--Sobic001G430100 Sobic002G003800 Sobic002G003800 Sobic004G348800--Sobic002G003800 Sobic004G348800--Sobic006G197100 Sobic009G109000 Sobic009G109000 Sobic004G348800--Sobic009G109000 Sobic004G348800--Sobic003G311800 Sobic004G348800--Sobic007G050200
Octagon: transcription factors


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