Gene annotation
Transcriptome id Sobic.002G176100.1
Synonym Sb02g022500
Functional annotation membrane protein, putative, expressed
UniProt A0A1B6QBZ5
Pfam PF01925
Panther DB PTHR14255 PTHR14255:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G25737 : Sulfite exporter TauE/SafE family protein
RAP-DB (Rice) LOC_Os09g17600.2 : membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a013787
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G176100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G319500 receptor protein kinase, putative, expressed -
2 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
3 Sobic.004G141100 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
4 Sobic.010G008400 bark storage protein A precursor, putative, expressed -
5 Sobic.003G417200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@esterase, putative, expressed -
6 Sobic.010G184800 heme oxygenase 1, putative, expressed K00510: heme oxygenase 1
7 Sobic.008G009400 - -
8 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
10 Sobic.006G054800 "glycerophosphodiester phosphodiesterase, up-regulated under drought stress, involved in the final step of the choline biosynthesis pathway, mapped into a QTL involved in stay green (QSTG1_6) "(PubMedID : 24655390)@Glycerophosphodiester phosphodiesterase ( At)(PubMedID : 27208977)@glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
11 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
12 Sobic.001G330300 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
13 Sobic.003G007600 expressed protein -
14 Sobic.010G082600 EF hand family protein, putative, expressed -
15 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.010G029700 tentative name(PubMedID : 31536532)@oxidoreductase, putative, expressed -
17 Sobic.003G432700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@secreted glycoprotein, putative, expressed -
18 Sobic.006G141700 OsGrx_C2.2 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
19 Sobic.001G500000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.005G107900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -


Gene co-expression network
sample Sobic002G176100 Sobic002G176100 Sobic003G319500 Sobic003G319500 Sobic002G176100--Sobic003G319500 Sobic009G111000 Sobic009G111000 Sobic002G176100--Sobic009G111000 Sobic004G141100 Sobic004G141100 Sobic002G176100--Sobic004G141100 Sobic010G008400 Sobic010G008400 Sobic002G176100--Sobic010G008400 Sobic003G417200 Sobic003G417200 Sobic002G176100--Sobic003G417200 Sobic010G184800 Sobic010G184800 Sobic002G176100--Sobic010G184800 Sobic008G009400 Sobic008G009400 Sobic002G176100--Sobic008G009400 Sobic001G304100 Sobic001G304100 Sobic002G176100--Sobic001G304100 Sobic009G188000 Sobic009G188000 Sobic002G176100--Sobic009G188000 Sobic003G319500--Sobic002G176100 Sobic003G319500--Sobic003G417200 Sobic003G319500--Sobic009G111000 Sobic002G213600 Sobic002G213600 Sobic003G319500--Sobic002G213600 Sobic003G319500--Sobic001G304100 Sobic001G139100 Sobic001G139100 Sobic003G319500--Sobic001G139100 Sobic001G169500 Sobic001G169500 Sobic003G319500--Sobic001G169500 Sobic005G107900 Sobic005G107900 Sobic003G319500--Sobic005G107900 Sobic003G084400 Sobic003G084400 Sobic003G319500--Sobic003G084400 Sobic002G017800 Sobic002G017800 Sobic009G111000--Sobic002G017800 Sobic009G111000--Sobic002G176100 Sobic001G367600 Sobic001G367600 Sobic009G111000--Sobic001G367600 Sobic009G111000--Sobic003G417200 Sobic001G325400 Sobic001G325400 Sobic009G111000--Sobic001G325400 Sobic003G426400 Sobic003G426400 Sobic009G111000--Sobic003G426400 Sobic002G055700 Sobic002G055700 Sobic009G111000--Sobic002G055700 Sobic001G500000 Sobic001G500000 Sobic009G111000--Sobic001G500000 Sobic009G111000--Sobic003G319500 Sobic002G351300 Sobic002G351300 Sobic004G141100--Sobic002G351300 Sobic006G235100 Sobic006G235100 Sobic004G141100--Sobic006G235100 Sobic010G082600 Sobic010G082600 Sobic004G141100--Sobic010G082600 Sobic007G017500 Sobic007G017500 Sobic004G141100--Sobic007G017500 Sobic006G075400 Sobic006G075400 Sobic004G141100--Sobic006G075400 Sobic004G141100--Sobic008G009400 Sobic006G054800 Sobic006G054800 Sobic004G141100--Sobic006G054800 Sobic006G008000 Sobic006G008000 Sobic004G141100--Sobic006G008000 Sobic008G066401 Sobic008G066401 Sobic004G141100--Sobic008G066401 Sobic010G008400--Sobic002G176100 Sobic002G003800 Sobic002G003800 Sobic010G008400--Sobic002G003800 Sobic010G008400--Sobic003G319500 Sobic002G327300 Sobic002G327300 Sobic010G008400--Sobic002G327300 Sobic004G046200 Sobic004G046200 Sobic010G008400--Sobic004G046200 Sobic010G008400--Sobic001G500000 Sobic010G085800 Sobic010G085800 Sobic010G008400--Sobic010G085800 Sobic010G008400--Sobic002G017800 Sobic010G008400--Sobic009G111000 Sobic003G417200--Sobic009G111000 Sobic003G417200--Sobic003G319500 Sobic003G417200--Sobic001G304100 Sobic005G011300 Sobic005G011300 Sobic003G417200--Sobic005G011300 Sobic003G417200--Sobic001G500000 Sobic003G432700 Sobic003G432700 Sobic003G417200--Sobic003G432700 Sobic003G417200--Sobic003G084400 Sobic003G417200--Sobic002G176100 Sobic008G186100 Sobic008G186100 Sobic003G417200--Sobic008G186100 Sobic010G184800--Sobic001G304100 Sobic010G184800--Sobic009G111000 Sobic001G049900 Sobic001G049900 Sobic010G184800--Sobic001G049900 Sobic010G029700 Sobic010G029700 Sobic010G184800--Sobic010G029700 Sobic010G184800--Sobic008G186100 Sobic001G231700 Sobic001G231700 Sobic010G184800--Sobic001G231700 Sobic010G184800--Sobic002G176100 Sobic010G184800--Sobic004G046200 Sobic006G234800 Sobic006G234800 Sobic010G184800--Sobic006G234800 Sobic004G297900 Sobic004G297900 Sobic008G009400--Sobic004G297900 Sobic004G295100 Sobic004G295100 Sobic008G009400--Sobic004G295100 Sobic008G009400--Sobic002G351300 Sobic003G299300 Sobic003G299300 Sobic008G009400--Sobic003G299300 Sobic010G270700 Sobic010G270700 Sobic008G009400--Sobic010G270700 Sobic008G009400--Sobic004G141100 Sobic008G009400--Sobic009G188000 Sobic006G235200 Sobic006G235200 Sobic008G009400--Sobic006G235200 Sobic001G330300 Sobic001G330300 Sobic008G009400--Sobic001G330300 Sobic001G304100--Sobic009G188000 Sobic001G238400 Sobic001G238400 Sobic001G304100--Sobic001G238400 Sobic001G302600 Sobic001G302600 Sobic001G304100--Sobic001G302600 Sobic001G304100--Sobic002G213600 Sobic001G304100--Sobic003G084400 Sobic001G313600 Sobic001G313600 Sobic001G304100--Sobic001G313600 Sobic001G304100--Sobic005G107900 Sobic001G304100--Sobic003G417200 Sobic001G304100--Sobic006G234800 Sobic009G188000--Sobic001G313600 Sobic009G188000--Sobic001G304100 Sobic009G188000--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic009G188000--Sobic001G502400 Sobic009G188000--Sobic001G238400 Sobic009G188000--Sobic006G235100 Sobic009G188000--Sobic003G084400 Sobic009G188000--Sobic008G009400 Sobic001G295200 Sobic001G295200 Sobic009G188000--Sobic001G295200
Octagon: transcription factors


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